EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000006008 (Gene tree)
Gene ID: -
Gene Symbol: sf3b6
Alias: -
Full Name: splicing factor 3b%2C subunit 6
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Plus strand
Length: 2161 bases
Position: chrGL484402:615-2775
Accession: ZDB-GENE-040625-36
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000006627	RRM_1	PF00076.22	2.2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000006657	-	375	-	ENSPMAP00000006627	125 (aa)	-	S4RN41

Gene Model

Click here to download ENSPMAG00000006008's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000006008's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000006008	sf3b6	94	88.136	ENSG00000115128	SF3B6	94	88.136	Homo_sapiens
ENSPMAG00000006008	sf3b6	94	88.136	ENSAPOG00000023788	sf3b6	94	88.136	Acanthochromis_polyacanthus
ENSPMAG00000006008	sf3b6	94	88.136	ENSAMEG00000002786	SF3B6	94	88.136	Ailuropoda_melanoleuca
ENSPMAG00000006008	sf3b6	94	88.136	ENSACIG00000012608	sf3b6	94	88.136	Amphilophus_citrinellus
ENSPMAG00000006008	sf3b6	94	88.136	ENSAOCG00000013394	sf3b6	94	88.136	Amphiprion_ocellaris
ENSPMAG00000006008	sf3b6	94	88.136	ENSAPEG00000015311	sf3b6	94	88.136	Amphiprion_percula
ENSPMAG00000006008	sf3b6	94	88.136	ENSATEG00000016569	sf3b6	94	88.136	Anabas_testudineus
ENSPMAG00000006008	sf3b6	94	88.136	ENSACAG00000011677	SF3B6	94	88.136	Anolis_carolinensis
ENSPMAG00000006008	sf3b6	94	88.136	ENSANAG00000027284	SF3B6	90	88.136	Aotus_nancymaae
ENSPMAG00000006008	sf3b6	94	88.136	ENSACLG00000007793	sf3b6	94	88.136	Astatotilapia_calliptera
ENSPMAG00000006008	sf3b6	94	88.136	ENSAMXG00000034888	sf3b6	94	88.136	Astyanax_mexicanus
ENSPMAG00000006008	sf3b6	94	88.136	ENSBTAG00000003407	SF3B6	94	88.136	Bos_taurus
ENSPMAG00000006008	sf3b6	94	86.441	ENSBTAG00000049128	-	94	86.441	Bos_taurus
ENSPMAG00000006008	sf3b6	90	67.857	WBGene00016808	C50D2.5	81	67.857	Caenorhabditis_elegans
ENSPMAG00000006008	sf3b6	94	88.136	ENSCJAG00000007716	SF3B6	94	88.136	Callithrix_jacchus
ENSPMAG00000006008	sf3b6	94	88.136	ENSCAFG00000003957	SF3B6	94	88.136	Canis_familiaris
ENSPMAG00000006008	sf3b6	94	88.136	ENSCAFG00020025576	SF3B6	94	88.136	Canis_lupus_dingo
ENSPMAG00000006008	sf3b6	94	88.136	ENSCHIG00000009902	SF3B6	94	88.136	Capra_hircus
ENSPMAG00000006008	sf3b6	94	88.136	ENSTSYG00000013978	SF3B6	94	88.136	Carlito_syrichta
ENSPMAG00000006008	sf3b6	94	88.034	ENSCAPG00000016302	SF3B6	96	88.034	Cavia_aperea
ENSPMAG00000006008	sf3b6	94	88.136	ENSCPOG00000008016	SF3B6	94	88.793	Cavia_porcellus
ENSPMAG00000006008	sf3b6	87	87.156	ENSCCAG00000018894	-	85	87.156	Cebus_capucinus
ENSPMAG00000006008	sf3b6	94	88.136	ENSCCAG00000036653	SF3B6	94	88.136	Cebus_capucinus
ENSPMAG00000006008	sf3b6	94	88.136	ENSCATG00000030936	SF3B6	94	88.136	Cercocebus_atys
ENSPMAG00000006008	sf3b6	94	88.136	ENSCLAG00000014512	SF3B6	97	88.136	Chinchilla_lanigera
ENSPMAG00000006008	sf3b6	94	88.136	ENSCSAG00000008390	SF3B6	94	88.136	Chlorocebus_sabaeus
ENSPMAG00000006008	sf3b6	94	67.797	ENSCHOG00000013886	-	94	67.797	Choloepus_hoffmanni
ENSPMAG00000006008	sf3b6	94	88.136	ENSCHOG00000000689	SF3B6	94	88.136	Choloepus_hoffmanni
ENSPMAG00000006008	sf3b6	94	88.136	ENSCPBG00000020042	SF3B6	94	88.136	Chrysemys_picta_bellii
ENSPMAG00000006008	sf3b6	94	81.197	ENSCING00000012689	-	92	81.197	Ciona_intestinalis
ENSPMAG00000006008	sf3b6	94	88.136	ENSCANG00000030559	SF3B6	94	88.136	Colobus_angolensis_palliatus
ENSPMAG00000006008	sf3b6	94	88.136	ENSCGRG00001014595	Sf3b6	98	88.034	Cricetulus_griseus_chok1gshd
ENSPMAG00000006008	sf3b6	94	88.136	ENSCGRG00000005272	Sf3b6	98	88.034	Cricetulus_griseus_crigri
ENSPMAG00000006008	sf3b6	94	88.983	ENSCSEG00000019017	sf3b6	94	88.983	Cynoglossus_semilaevis
ENSPMAG00000006008	sf3b6	94	87.288	ENSCVAG00000005055	sf3b6	94	87.288	Cyprinodon_variegatus
ENSPMAG00000006008	sf3b6	94	88.136	ENSDARG00000009753	sf3b6	94	88.136	Danio_rerio
ENSPMAG00000006008	sf3b6	94	88.136	ENSDNOG00000007148	SF3B6	94	88.136	Dasypus_novemcinctus
ENSPMAG00000006008	sf3b6	94	88.136	ENSDORG00000009772	Sf3b6	94	88.136	Dipodomys_ordii
ENSPMAG00000006008	sf3b6	90	75.439	ENSDORG00000027390	-	89	75.439	Dipodomys_ordii
ENSPMAG00000006008	sf3b6	90	75.439	ENSDORG00000029761	-	89	75.439	Dipodomys_ordii
ENSPMAG00000006008	sf3b6	91	77.193	FBgn0035692	Sf3b6	94	77.193	Drosophila_melanogaster
ENSPMAG00000006008	sf3b6	92	94.783	ENSEBUG00000004424	sf3b6	91	94.783	Eptatretus_burgeri
ENSPMAG00000006008	sf3b6	94	76.271	ENSEASG00005008061	-	94	76.271	Equus_asinus_asinus
ENSPMAG00000006008	sf3b6	94	88.136	ENSEASG00005009993	SF3B6	94	88.136	Equus_asinus_asinus
ENSPMAG00000006008	sf3b6	71	91.011	ENSECAG00000015618	SF3B6	82	91.011	Equus_caballus
ENSPMAG00000006008	sf3b6	74	77.174	ENSECAG00000027755	-	79	77.174	Equus_caballus
ENSPMAG00000006008	sf3b6	94	88.136	ENSELUG00000010379	sf3b6	94	88.136	Esox_lucius
ENSPMAG00000006008	sf3b6	94	88.136	ENSFCAG00000031365	SF3B6	94	88.136	Felis_catus
ENSPMAG00000006008	sf3b6	94	88.136	ENSFALG00000001651	SF3B6	94	88.136	Ficedula_albicollis
ENSPMAG00000006008	sf3b6	94	88.136	ENSFDAG00000007864	SF3B6	94	88.136	Fukomys_damarensis
ENSPMAG00000006008	sf3b6	94	87.288	ENSFHEG00000000685	sf3b6	94	87.288	Fundulus_heteroclitus
ENSPMAG00000006008	sf3b6	94	87.288	ENSGMOG00000005123	sf3b6	94	87.288	Gadus_morhua
ENSPMAG00000006008	sf3b6	73	89.011	ENSGALG00000016501	SF3B6	100	89.011	Gallus_gallus
ENSPMAG00000006008	sf3b6	94	88.136	ENSGAFG00000009334	sf3b6	94	88.136	Gambusia_affinis
ENSPMAG00000006008	sf3b6	94	88.983	ENSGACG00000004803	sf3b6	94	88.983	Gasterosteus_aculeatus
ENSPMAG00000006008	sf3b6	94	88.136	ENSGAGG00000012240	SF3B6	94	88.136	Gopherus_agassizii
ENSPMAG00000006008	sf3b6	94	88.136	ENSGGOG00000040806	SF3B6	94	88.136	Gorilla_gorilla
ENSPMAG00000006008	sf3b6	94	88.136	ENSHBUG00000012556	sf3b6	94	88.136	Haplochromis_burtoni
ENSPMAG00000006008	sf3b6	94	88.136	ENSHGLG00000014895	SF3B14	94	88.136	Heterocephalus_glaber_female
ENSPMAG00000006008	sf3b6	94	88.136	ENSHGLG00100008639	SF3B14	94	88.136	Heterocephalus_glaber_male
ENSPMAG00000006008	sf3b6	94	87.288	ENSHCOG00000019962	sf3b6	94	87.288	Hippocampus_comes
ENSPMAG00000006008	sf3b6	94	88.136	ENSIPUG00000023800	sf3b6	94	88.136	Ictalurus_punctatus
ENSPMAG00000006008	sf3b6	94	88.136	ENSJJAG00000021819	Sf3b6	94	88.136	Jaculus_jaculus
ENSPMAG00000006008	sf3b6	94	88.136	ENSKMAG00000004000	sf3b6	94	88.136	Kryptolebias_marmoratus
ENSPMAG00000006008	sf3b6	94	88.136	ENSLBEG00000022937	sf3b6	94	88.136	Labrus_bergylta
ENSPMAG00000006008	sf3b6	94	88.136	ENSLACG00000014326	SF3B6	94	88.136	Latimeria_chalumnae
ENSPMAG00000006008	sf3b6	94	88.136	ENSLOCG00000016481	sf3b6	94	88.136	Lepisosteus_oculatus
ENSPMAG00000006008	sf3b6	94	88.136	ENSLAFG00000029423	SF3B6	94	88.136	Loxodonta_africana
ENSPMAG00000006008	sf3b6	94	88.136	ENSMFAG00000038178	SF3B6	94	88.136	Macaca_fascicularis
ENSPMAG00000006008	sf3b6	94	88.136	ENSMMUG00000001282	SF3B6	94	88.136	Macaca_mulatta
ENSPMAG00000006008	sf3b6	94	88.136	ENSMNEG00000029050	SF3B6	94	88.136	Macaca_nemestrina
ENSPMAG00000006008	sf3b6	94	88.136	ENSMLEG00000019896	SF3B6	94	88.136	Mandrillus_leucophaeus
ENSPMAG00000006008	sf3b6	71	91.011	ENSMAMG00000007713	sf3b6	81	91.011	Mastacembelus_armatus
ENSPMAG00000006008	sf3b6	94	88.136	ENSMZEG00005003557	sf3b6	94	88.136	Maylandia_zebra
ENSPMAG00000006008	sf3b6	94	88.136	ENSMGAG00000014057	SF3B6	94	88.136	Meleagris_gallopavo
ENSPMAG00000006008	sf3b6	94	88.136	ENSMAUG00000000586	-	94	88.136	Mesocricetus_auratus
ENSPMAG00000006008	sf3b6	94	88.136	ENSMICG00000032874	SF3B6	94	88.136	Microcebus_murinus
ENSPMAG00000006008	sf3b6	94	88.136	ENSMOCG00000014338	Sf3b6	94	88.136	Microtus_ochrogaster
ENSPMAG00000006008	sf3b6	94	87.288	ENSMMOG00000015653	sf3b6	94	87.288	Mola_mola
ENSPMAG00000006008	sf3b6	94	81.356	ENSMODG00000002144	SF3B6	94	81.356	Monodelphis_domestica
ENSPMAG00000006008	sf3b6	94	87.288	ENSMALG00000019642	sf3b6	63	87.288	Monopterus_albus
ENSPMAG00000006008	sf3b6	94	88.136	MGP_CAROLIEiJ_G0017590	Sf3b6	94	88.136	Mus_caroli
ENSPMAG00000006008	sf3b6	94	88.136	ENSMUSG00000037361	Sf3b6	98	88.393	Mus_musculus
ENSPMAG00000006008	sf3b6	94	88.136	MGP_PahariEiJ_G0029348	Sf3b6	94	88.136	Mus_pahari
ENSPMAG00000006008	sf3b6	94	88.136	MGP_SPRETEiJ_G0018434	Sf3b6	94	88.136	Mus_spretus
ENSPMAG00000006008	sf3b6	94	88.136	ENSMPUG00000013957	SF3B6	94	88.136	Mustela_putorius_furo
ENSPMAG00000006008	sf3b6	94	88.136	ENSMLUG00000002473	SF3B6	94	88.136	Myotis_lucifugus
ENSPMAG00000006008	sf3b6	94	88.136	ENSNGAG00000020256	Sf3b6	94	88.136	Nannospalax_galili
ENSPMAG00000006008	sf3b6	94	88.136	ENSNBRG00000018244	sf3b6	94	88.136	Neolamprologus_brichardi
ENSPMAG00000006008	sf3b6	94	88.136	ENSNLEG00000000815	-	94	88.136	Nomascus_leucogenys
ENSPMAG00000006008	sf3b6	87	89.908	ENSODEG00000009547	SF3B6	92	89.908	Octodon_degus
ENSPMAG00000006008	sf3b6	94	88.136	ENSONIG00000001219	sf3b6	94	88.136	Oreochromis_niloticus
ENSPMAG00000006008	sf3b6	94	88.136	ENSOANG00000007627	SF3B6	94	88.136	Ornithorhynchus_anatinus
ENSPMAG00000006008	sf3b6	94	88.136	ENSOCUG00000022008	SF3B6	94	88.136	Oryctolagus_cuniculus
ENSPMAG00000006008	sf3b6	94	88.136	ENSORLG00000015955	sf3b6	94	88.136	Oryzias_latipes
ENSPMAG00000006008	sf3b6	94	88.136	ENSORLG00020005875	sf3b6	94	88.136	Oryzias_latipes_hni
ENSPMAG00000006008	sf3b6	94	88.136	ENSORLG00015001347	sf3b6	94	88.136	Oryzias_latipes_hsok
ENSPMAG00000006008	sf3b6	94	87.288	ENSOMEG00000014506	sf3b6	94	87.288	Oryzias_melastigma
ENSPMAG00000006008	sf3b6	94	88.136	ENSOGAG00000004468	SF3B6	94	88.136	Otolemur_garnettii
ENSPMAG00000006008	sf3b6	94	88.136	ENSOARG00000017819	SF3B6	94	88.136	Ovis_aries
ENSPMAG00000006008	sf3b6	94	88.136	ENSPPAG00000027816	SF3B6	94	88.136	Pan_paniscus
ENSPMAG00000006008	sf3b6	94	88.136	ENSPPRG00000023257	SF3B6	94	88.136	Panthera_pardus
ENSPMAG00000006008	sf3b6	94	88.136	ENSPTIG00000013322	SF3B6	94	88.136	Panthera_tigris_altaica
ENSPMAG00000006008	sf3b6	94	88.136	ENSPTRG00000011709	SF3B6	94	88.136	Pan_troglodytes
ENSPMAG00000006008	sf3b6	94	88.136	ENSPANG00000021963	SF3B6	94	88.136	Papio_anubis
ENSPMAG00000006008	sf3b6	94	88.136	ENSPKIG00000012311	sf3b6	94	88.136	Paramormyrops_kingsleyae
ENSPMAG00000006008	sf3b6	92	89.565	ENSPSIG00000017115	SF3B6	100	89.565	Pelodiscus_sinensis
ENSPMAG00000006008	sf3b6	71	88.764	ENSPMGG00000014621	sf3b6	74	88.764	Periophthalmus_magnuspinnatus
ENSPMAG00000006008	sf3b6	93	89.655	ENSPEMG00000010308	Sf3b6	97	89.655	Peromyscus_maniculatus_bairdii
ENSPMAG00000006008	sf3b6	92	70.435	ENSPCIG00000015858	-	92	70.435	Phascolarctos_cinereus
ENSPMAG00000006008	sf3b6	94	88.136	ENSPCIG00000022128	-	94	88.136	Phascolarctos_cinereus
ENSPMAG00000006008	sf3b6	94	88.136	ENSPFOG00000012494	sf3b6	94	88.136	Poecilia_formosa
ENSPMAG00000006008	sf3b6	94	88.136	ENSPLAG00000020460	sf3b6	94	88.136	Poecilia_latipinna
ENSPMAG00000006008	sf3b6	94	88.136	ENSPMEG00000004426	sf3b6	94	88.136	Poecilia_mexicana
ENSPMAG00000006008	sf3b6	94	88.136	ENSPPYG00000012603	SF3B6	94	88.136	Pongo_abelii
ENSPMAG00000006008	sf3b6	94	88.136	ENSPVAG00000011346	SF3B6	94	88.136	Pteropus_vampyrus
ENSPMAG00000006008	sf3b6	94	88.136	ENSPNYG00000021832	sf3b6	94	88.136	Pundamilia_nyererei
ENSPMAG00000006008	sf3b6	94	88.136	ENSPNAG00000008845	sf3b6	94	88.136	Pygocentrus_nattereri
ENSPMAG00000006008	sf3b6	94	72.881	ENSRNOG00000046172	Sf3b6	94	72.881	Rattus_norvegicus
ENSPMAG00000006008	sf3b6	94	88.136	ENSRBIG00000039598	SF3B6	96	89.565	Rhinopithecus_bieti
ENSPMAG00000006008	sf3b6	94	88.136	ENSRROG00000011368	SF3B6	94	88.136	Rhinopithecus_roxellana
ENSPMAG00000006008	sf3b6	94	88.136	ENSSBOG00000002914	SF3B6	94	88.136	Saimiri_boliviensis_boliviensis
ENSPMAG00000006008	sf3b6	94	88.136	ENSSFOG00015014370	sf3b6	94	88.136	Scleropages_formosus
ENSPMAG00000006008	sf3b6	94	88.136	ENSSMAG00000004566	sf3b6	94	88.136	Scophthalmus_maximus
ENSPMAG00000006008	sf3b6	94	88.136	ENSSDUG00000006538	sf3b6	94	88.136	Seriola_dumerili
ENSPMAG00000006008	sf3b6	94	88.136	ENSSLDG00000004494	sf3b6	94	88.136	Seriola_lalandi_dorsalis
ENSPMAG00000006008	sf3b6	94	88.136	ENSSARG00000011902	-	94	88.136	Sorex_araneus
ENSPMAG00000006008	sf3b6	94	88.136	ENSSPUG00000014919	SF3B6	94	88.136	Sphenodon_punctatus
ENSPMAG00000006008	sf3b6	94	88.136	ENSSPAG00000013201	sf3b6	94	88.136	Stegastes_partitus
ENSPMAG00000006008	sf3b6	94	88.136	ENSSSCG00000008587	SF3B6	94	88.136	Sus_scrofa
ENSPMAG00000006008	sf3b6	94	88.136	ENSTGUG00000013191	SF3B6	94	88.136	Taeniopygia_guttata
ENSPMAG00000006008	sf3b6	94	88.136	ENSTRUG00000025286	sf3b6	94	88.136	Takifugu_rubripes
ENSPMAG00000006008	sf3b6	94	88.136	ENSTNIG00000009719	sf3b6	94	88.136	Tetraodon_nigroviridis
ENSPMAG00000006008	sf3b6	92	89.565	ENSTBEG00000012532	SF3B6	100	89.565	Tupaia_belangeri
ENSPMAG00000006008	sf3b6	92	89.565	ENSTTRG00000013430	SF3B6	100	89.565	Tursiops_truncatus
ENSPMAG00000006008	sf3b6	94	73.109	ENSUAMG00000000978	-	94	73.109	Ursus_americanus
ENSPMAG00000006008	sf3b6	94	88.136	ENSUAMG00000025329	SF3B6	94	88.136	Ursus_americanus
ENSPMAG00000006008	sf3b6	94	88.136	ENSUMAG00000022835	SF3B6	94	88.136	Ursus_maritimus
ENSPMAG00000006008	sf3b6	92	89.565	ENSVPAG00000005546	SF3B6	100	89.565	Vicugna_pacos
ENSPMAG00000006008	sf3b6	94	88.136	ENSVVUG00000010874	SF3B6	94	88.136	Vulpes_vulpes
ENSPMAG00000006008	sf3b6	94	87.288	ENSXETG00000018204	sf3b6	94	87.288	Xenopus_tropicalis
ENSPMAG00000006008	sf3b6	80	80.189	ENSXCOG00000008477	sf3b6	82	80.189	Xiphophorus_couchianus
ENSPMAG00000006008	sf3b6	94	88.136	ENSXMAG00000010747	sf3b6	94	88.136	Xiphophorus_maculatus