EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMAG00000006011 (Gene tree)
Gene ID: -
Gene Symbol: SMARCA5 (1 of many)
Alias: -
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 5
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 17960 bases
Position: chrGL479849:316708-334667
Accession: 11101
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000006708	ResIII	PF04851.15	2.7e-12	1	1
ENSPMAP00000006708	DEAD	PF00270.29	8.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000006738	SMARCA5 (1 of many)-201	2958	-	ENSPMAP00000006708	986 (aa)	-	S4RNC2

Gene Model

Click here to download ENSPMAG00000006011's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000006011's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMAG00000006011	SMARCA5	63	86.386	ENSPMAG00000008026	SMARCA5	96	86.246
ENSPMAG00000006011	SMARCA5	50	44.574	ENSPMAG00000003871	-	96	44.574

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000006011	SMARCA5	81	85.440	ENSG00000153147	SMARCA5	96	69.882	Homo_sapiens
ENSPMAG00000006011	SMARCA5	81	85.600	ENSAMEG00000009585	SMARCA5	96	69.676	Ailuropoda_melanoleuca
ENSPMAG00000006011	SMARCA5	78	88.591	ENSAPLG00000009206	SMARCA5	99	70.829	Anas_platyrhynchos
ENSPMAG00000006011	SMARCA5	80	85.575	ENSACAG00000003038	SMARCA5	95	70.344	Anolis_carolinensis
ENSPMAG00000006011	SMARCA5	80	86.062	ENSANAG00000019345	SMARCA5	98	70.749	Aotus_nancymaae
ENSPMAG00000006011	SMARCA5	82	84.301	ENSBTAG00000003399	SMARCA5	95	69.901	Bos_taurus
ENSPMAG00000006011	SMARCA5	80	86.062	ENSCJAG00000002735	SMARCA5	96	69.216	Callithrix_jacchus
ENSPMAG00000006011	SMARCA5	83	83.488	ENSCAFG00000007525	SMARCA5	96	69.578	Canis_familiaris
ENSPMAG00000006011	SMARCA5	80	88.591	ENSCAFG00020025641	SMARCA5	95	70.281	Canis_lupus_dingo
ENSPMAG00000006011	SMARCA5	83	83.642	ENSCHIG00000013730	-	96	69.676	Capra_hircus
ENSPMAG00000006011	SMARCA5	83	81.977	ENSCHIG00000016375	-	97	68.499	Capra_hircus
ENSPMAG00000006011	SMARCA5	83	84.031	ENSTSYG00000009954	SMARCA5	99	70.582	Carlito_syrichta
ENSPMAG00000006011	SMARCA5	79	85.832	ENSCAPG00000013747	SMARCA5	95	70.450	Cavia_aperea
ENSPMAG00000006011	SMARCA5	81	85.440	ENSCPOG00000002259	SMARCA5	96	69.685	Cavia_porcellus
ENSPMAG00000006011	SMARCA5	80	86.062	ENSCCAG00000027215	SMARCA5	98	70.749	Cebus_capucinus
ENSPMAG00000006011	SMARCA5	81	85.440	ENSCATG00000044917	SMARCA5	96	69.882	Cercocebus_atys
ENSPMAG00000006011	SMARCA5	81	85.600	ENSCLAG00000006153	SMARCA5	99	70.582	Chinchilla_lanigera
ENSPMAG00000006011	SMARCA5	79	86.777	ENSCSAG00000003448	SMARCA5	100	71.311	Chlorocebus_sabaeus
ENSPMAG00000006011	SMARCA5	70	85.409	ENSCHOG00000011724	SMARCA5	83	68.588	Choloepus_hoffmanni
ENSPMAG00000006011	SMARCA5	80	86.224	ENSCPBG00000027535	SMARCA5	97	69.745	Chrysemys_picta_bellii
ENSPMAG00000006011	SMARCA5	81	85.440	ENSCANG00000041629	SMARCA5	96	69.882	Colobus_angolensis_palliatus
ENSPMAG00000006011	SMARCA5	82	84.038	ENSCGRG00001012719	Smarca5	95	69.655	Cricetulus_griseus_chok1gshd
ENSPMAG00000006011	SMARCA5	81	85.440	ENSCGRG00000001417	Smarca5	98	70.482	Cricetulus_griseus_crigri
ENSPMAG00000006011	SMARCA5	82	81.977	ENSDNOG00000009158	SMARCA5	95	67.560	Dasypus_novemcinctus
ENSPMAG00000006011	SMARCA5	76	89.796	ENSDORG00000003466	Smarca5	96	64.632	Dipodomys_ordii
ENSPMAG00000006011	SMARCA5	96	69.160	ENSEBUG00000014773	SMARCA5	96	68.923	Eptatretus_burgeri
ENSPMAG00000006011	SMARCA5	98	71.429	ENSEASG00005001866	SMARCA5	96	71.835	Equus_asinus_asinus
ENSPMAG00000006011	SMARCA5	81	85.600	ENSECAG00000002676	SMARCA5	96	69.783	Equus_caballus
ENSPMAG00000006011	SMARCA5	80	86.438	ENSEEUG00000013176	SMARCA5	82	86.438	Erinaceus_europaeus
ENSPMAG00000006011	SMARCA5	79	84.983	ENSELUG00000014653	SMARCA5	98	70.175	Esox_lucius
ENSPMAG00000006011	SMARCA5	81	85.600	ENSFCAG00000004544	SMARCA5	96	69.676	Felis_catus
ENSPMAG00000006011	SMARCA5	79	86.777	ENSFALG00000004987	SMARCA5	100	70.902	Ficedula_albicollis
ENSPMAG00000006011	SMARCA5	81	85.600	ENSFDAG00000021016	SMARCA5	99	70.582	Fukomys_damarensis
ENSPMAG00000006011	SMARCA5	82	81.106	ENSGMOG00000007519	SMARCA5	98	67.583	Gadus_morhua
ENSPMAG00000006011	SMARCA5	81	85.920	ENSGALG00000009913	SMARCA5	97	69.724	Gallus_gallus
ENSPMAG00000006011	SMARCA5	85	80.814	ENSGACG00000017238	SMARCA5	97	69.062	Gasterosteus_aculeatus
ENSPMAG00000006011	SMARCA5	83	83.308	ENSGAGG00000019882	SMARCA5	97	69.646	Gopherus_agassizii
ENSPMAG00000006011	SMARCA5	81	85.440	ENSGGOG00000012595	SMARCA5	99	70.783	Gorilla_gorilla
ENSPMAG00000006011	SMARCA5	82	84.144	ENSHGLG00000000816	-	96	69.715	Heterocephalus_glaber_female
ENSPMAG00000006011	SMARCA5	87	75.077	ENSHGLG00000000317	-	82	74.961	Heterocephalus_glaber_female
ENSPMAG00000006011	SMARCA5	81	85.600	ENSHGLG00100018421	-	99	70.582	Heterocephalus_glaber_male
ENSPMAG00000006011	SMARCA5	81	85.600	ENSSTOG00000010683	SMARCA5	96	69.578	Ictidomys_tridecemlineatus
ENSPMAG00000006011	SMARCA5	82	84.144	ENSJJAG00000014965	Smarca5	96	69.480	Jaculus_jaculus
ENSPMAG00000006011	SMARCA5	81	85.304	ENSLACG00000007091	SMARCA5	97	70.512	Latimeria_chalumnae
ENSPMAG00000006011	SMARCA5	79	86.885	ENSLOCG00000008966	SMARCA5	99	69.208	Lepisosteus_oculatus
ENSPMAG00000006011	SMARCA5	81	85.600	ENSLAFG00000007795	SMARCA5	96	69.685	Loxodonta_africana
ENSPMAG00000006011	SMARCA5	81	85.440	ENSMFAG00000043649	SMARCA5	96	69.882	Macaca_fascicularis
ENSPMAG00000006011	SMARCA5	81	85.440	ENSMMUG00000000829	SMARCA5	97	72.059	Macaca_mulatta
ENSPMAG00000006011	SMARCA5	81	85.440	ENSMNEG00000031916	SMARCA5	96	69.882	Macaca_nemestrina
ENSPMAG00000006011	SMARCA5	81	85.440	ENSMLEG00000042393	SMARCA5	96	69.882	Mandrillus_leucophaeus
ENSPMAG00000006011	SMARCA5	82	84.531	ENSMGAG00000003517	SMARCA5	96	86.520	Meleagris_gallopavo
ENSPMAG00000006011	SMARCA5	81	85.440	ENSMAUG00000015902	Smarca5	97	70.482	Mesocricetus_auratus
ENSPMAG00000006011	SMARCA5	82	84.301	ENSMICG00000003971	SMARCA5	99	69.461	Microcebus_murinus
ENSPMAG00000006011	SMARCA5	83	83.385	ENSMOCG00000016986	-	96	69.360	Microtus_ochrogaster
ENSPMAG00000006011	SMARCA5	83	83.437	ENSMODG00000000391	SMARCA5	96	69.420	Monodelphis_domestica
ENSPMAG00000006011	SMARCA5	82	83.830	ENSMUSG00000031715	Smarca5	96	69.420	Mus_musculus
ENSPMAG00000006011	SMARCA5	82	83.987	MGP_PahariEiJ_G0022862	Smarca5	96	69.518	Mus_pahari
ENSPMAG00000006011	SMARCA5	81	85.440	ENSMLUG00000000468	SMARCA5	96	69.578	Myotis_lucifugus
ENSPMAG00000006011	SMARCA5	83	83.645	ENSNGAG00000000441	Smarca5	96	69.595	Nannospalax_galili
ENSPMAG00000006011	SMARCA5	81	85.440	ENSNLEG00000005383	SMARCA5	96	69.882	Nomascus_leucogenys
ENSPMAG00000006011	SMARCA5	73	87.500	ENSMEUG00000001267	SMARCA5	74	87.500	Notamacropus_eugenii
ENSPMAG00000006011	SMARCA5	78	89.116	ENSOPRG00000014427	SMARCA5	75	89.116	Ochotona_princeps
ENSPMAG00000006011	SMARCA5	79	86.777	ENSOANG00000013921	SMARCA5	100	70.902	Ornithorhynchus_anatinus
ENSPMAG00000006011	SMARCA5	79	86.777	ENSOCUG00000013042	SMARCA5	100	71.004	Oryctolagus_cuniculus
ENSPMAG00000006011	SMARCA5	82	84.301	ENSOGAG00000009702	SMARCA5	96	69.793	Otolemur_garnettii
ENSPMAG00000006011	SMARCA5	82	84.351	ENSOARG00000010589	SMARCA5	95	70.010	Ovis_aries
ENSPMAG00000006011	SMARCA5	81	85.440	ENSPPAG00000028523	SMARCA5	99	70.783	Pan_paniscus
ENSPMAG00000006011	SMARCA5	79	82.401	ENSPPRG00000004925	SMARCA5	83	80.507	Panthera_pardus
ENSPMAG00000006011	SMARCA5	81	85.600	ENSPTIG00000020959	SMARCA5	97	69.813	Panthera_tigris_altaica
ENSPMAG00000006011	SMARCA5	81	85.440	ENSPTRG00000016472	SMARCA5	99	70.783	Pan_troglodytes
ENSPMAG00000006011	SMARCA5	81	85.440	ENSPANG00000001175	SMARCA5	96	69.882	Papio_anubis
ENSPMAG00000006011	SMARCA5	81	82.698	ENSPKIG00000015699	SMARCA5	97	68.688	Paramormyrops_kingsleyae
ENSPMAG00000006011	SMARCA5	76	90.345	ENSPKIG00000015885	SMARCA5	100	70.842	Paramormyrops_kingsleyae
ENSPMAG00000006011	SMARCA5	81	83.520	ENSPSIG00000004177	SMARCA5	99	68.976	Pelodiscus_sinensis
ENSPMAG00000006011	SMARCA5	79	84.098	ENSPMGG00000012316	SMARCA5	80	84.098	Periophthalmus_magnuspinnatus
ENSPMAG00000006011	SMARCA5	81	85.440	ENSPEMG00000008060	Smarca5	97	70.482	Peromyscus_maniculatus_bairdii
ENSPMAG00000006011	SMARCA5	81	85.440	ENSPCIG00000003926	SMARCA5	96	69.617	Phascolarctos_cinereus
ENSPMAG00000006011	SMARCA5	81	85.440	ENSPPYG00000015091	SMARCA5	96	69.882	Pongo_abelii
ENSPMAG00000006011	SMARCA5	73	88.496	ENSPCAG00000014230	SMARCA5	71	88.496	Procavia_capensis
ENSPMAG00000006011	SMARCA5	81	85.327	ENSPCOG00000026744	SMARCA5	86	85.327	Propithecus_coquereli
ENSPMAG00000006011	SMARCA5	81	85.440	ENSPVAG00000006482	SMARCA5	96	69.783	Pteropus_vampyrus
ENSPMAG00000006011	SMARCA5	82	81.960	ENSPNAG00000027824	SMARCA5	96	71.144	Pygocentrus_nattereri
ENSPMAG00000006011	SMARCA5	63	86.062	ENSRNOG00000018149	Smarca5	99	71.154	Rattus_norvegicus
ENSPMAG00000006011	SMARCA5	81	85.440	ENSRBIG00000044644	SMARCA5	96	69.912	Rhinopithecus_bieti
ENSPMAG00000006011	SMARCA5	78	88.591	ENSRROG00000029591	SMARCA5	99	70.783	Rhinopithecus_roxellana
ENSPMAG00000006011	SMARCA5	80	86.062	ENSSBOG00000036257	SMARCA5	96	69.216	Saimiri_boliviensis_boliviensis
ENSPMAG00000006011	SMARCA5	81	85.440	ENSSHAG00000008464	SMARCA5	99	70.382	Sarcophilus_harrisii
ENSPMAG00000006011	SMARCA5	84	85.552	ENSSFOG00015013252	SMARCA5	95	70.876	Scleropages_formosus
ENSPMAG00000006011	SMARCA5	80	84.640	ENSSPUG00000007604	SMARCA5	97	86.735	Sphenodon_punctatus
ENSPMAG00000006011	SMARCA5	81	85.600	ENSSSCG00000009047	SMARCA5	96	69.676	Sus_scrofa
ENSPMAG00000006011	SMARCA5	80	85.737	ENSTGUG00000002408	SMARCA5	97	70.445	Taeniopygia_guttata
ENSPMAG00000006011	SMARCA5	78	88.591	ENSUAMG00000023495	SMARCA5	95	69.970	Ursus_americanus
ENSPMAG00000006011	SMARCA5	82	84.458	ENSUMAG00000015324	SMARCA5	97	70.040	Ursus_maritimus
ENSPMAG00000006011	SMARCA5	81	85.440	ENSVPAG00000008982	SMARCA5	96	69.578	Vicugna_pacos
ENSPMAG00000006011	SMARCA5	80	88.591	ENSVVUG00000017473	SMARCA5	96	69.724	Vulpes_vulpes
ENSPMAG00000006011	SMARCA5	91	69.807	ENSXETG00000017566	smarca5	93	69.807	Xenopus_tropicalis