EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000006035 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 203078 bases
Position: chrGL476370:281119-484196
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000006688	BRK	PF07533.16	6.6e-18	1	1
ENSPMAP00000006677	BRK	PF07533.16	1.4e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000006707	-	5175	-	ENSPMAP00000006677	1701 (aa)	-	S4RN91
ENSPMAT00000006729	-	2546	-	ENSPMAP00000006699	809 (aa)	-	S4RNB3
ENSPMAT00000006718	-	2964	-	ENSPMAP00000006688	964 (aa)	-	S4RNA2

Gene Model

Click here to download ENSPMAG00000006035's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000006035's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000006035	-	72	67.923	ENSG00000177200	CHD9	71	57.635	Homo_sapiens
ENSPMAG00000006035	-	72	67.739	ENSAMEG00000016232	CHD9	59	57.487	Ailuropoda_melanoleuca
ENSPMAG00000006035	-	66	72.598	ENSACAG00000016150	CHD9	59	56.289	Anolis_carolinensis
ENSPMAG00000006035	-	73	67.654	ENSANAG00000015630	CHD9	65	60.806	Aotus_nancymaae
ENSPMAG00000006035	-	72	67.820	ENSBTAG00000002287	CHD9	59	58.059	Bos_taurus
ENSPMAG00000006035	-	72	68.035	ENSCJAG00000001573	CHD9	65	61.172	Callithrix_jacchus
ENSPMAG00000006035	-	72	67.820	ENSCAFG00000009699	CHD9	59	57.487	Canis_familiaris
ENSPMAG00000006035	-	72	67.820	ENSCAFG00020002879	CHD9	64	61.538	Canis_lupus_dingo
ENSPMAG00000006035	-	92	67.418	ENSCHIG00000021000	CHD9	53	69.864	Capra_hircus
ENSPMAG00000006035	-	72	67.768	ENSTSYG00000007693	CHD9	65	61.538	Carlito_syrichta
ENSPMAG00000006035	-	65	69.811	ENSCAPG00000011604	CHD9	50	68.543	Cavia_aperea
ENSPMAG00000006035	-	69	67.230	ENSCPOG00000036544	CHD9	58	55.791	Cavia_porcellus
ENSPMAG00000006035	-	72	67.874	ENSCCAG00000036178	CHD9	65	60.806	Cebus_capucinus
ENSPMAG00000006035	-	72	68.003	ENSCATG00000036753	CHD9	64	61.538	Cercocebus_atys
ENSPMAG00000006035	-	72	67.498	ENSCLAG00000007137	CHD9	53	77.039	Chinchilla_lanigera
ENSPMAG00000006035	-	72	68.003	ENSCSAG00000005311	CHD9	59	57.143	Chlorocebus_sabaeus
ENSPMAG00000006035	-	94	65.934	ENSCPBG00000012459	CHD9	59	70.721	Chrysemys_picta_bellii
ENSPMAG00000006035	-	72	68.003	ENSCANG00000030349	CHD9	64	61.538	Colobus_angolensis_palliatus
ENSPMAG00000006035	-	72	67.742	ENSCGRG00001016150	Chd9	59	56.757	Cricetulus_griseus_chok1gshd
ENSPMAG00000006035	-	72	67.742	ENSCGRG00000012850	Chd9	53	76.824	Cricetulus_griseus_crigri
ENSPMAG00000006035	-	86	68.983	ENSDARG00000074498	chd9	61	68.837	Danio_rerio
ENSPMAG00000006035	-	72	67.737	ENSDNOG00000006045	CHD9	73	57.298	Dasypus_novemcinctus
ENSPMAG00000006035	-	72	68.171	ENSDORG00000008523	-	85	57.481	Dipodomys_ordii
ENSPMAG00000006035	-	61	69.336	ENSETEG00000009565	CHD9	53	69.336	Echinops_telfairi
ENSPMAG00000006035	-	91	67.671	ENSEASG00005014832	CHD9	72	70.287	Equus_asinus_asinus
ENSPMAG00000006035	-	72	67.739	ENSECAG00000011505	CHD9	59	57.437	Equus_caballus
ENSPMAG00000006035	-	60	58.261	ENSEEUG00000014515	CHD9	54	58.261	Erinaceus_europaeus
ENSPMAG00000006035	-	72	67.900	ENSFCAG00000022534	CHD9	65	61.905	Felis_catus
ENSPMAG00000006035	-	72	67.849	ENSFDAG00000021037	CHD9	59	56.716	Fukomys_damarensis
ENSPMAG00000006035	-	83	66.637	ENSGMOG00000006040	chd9	60	66.365	Gadus_morhua
ENSPMAG00000006035	-	72	67.713	ENSGALG00000039178	CHD9	61	56.809	Gallus_gallus
ENSPMAG00000006035	-	86	68.885	ENSGACG00000016694	chd9	62	68.799	Gasterosteus_aculeatus
ENSPMAG00000006035	-	72	67.923	ENSGGOG00000014816	CHD9	65	61.538	Gorilla_gorilla
ENSPMAG00000006035	-	86	69.671	ENSHBUG00000023322	chd9	60	69.671	Haplochromis_burtoni
ENSPMAG00000006035	-	72	67.607	ENSHGLG00000014938	CHD9	53	77.039	Heterocephalus_glaber_female
ENSPMAG00000006035	-	85	69.816	ENSHCOG00000000937	chd9	62	68.712	Hippocampus_comes
ENSPMAG00000006035	-	66	70.822	ENSIPUG00000016448	chd9	66	58.304	Ictalurus_punctatus
ENSPMAG00000006035	-	72	67.578	ENSSTOG00000022273	CHD9	53	76.824	Ictidomys_tridecemlineatus
ENSPMAG00000006035	-	72	67.820	ENSJJAG00000015741	-	85	57.764	Jaculus_jaculus
ENSPMAG00000006035	-	85	67.049	ENSLACG00000005557	CHD9	50	67.049	Latimeria_chalumnae
ENSPMAG00000006035	-	72	67.657	ENSLAFG00000015374	CHD9	59	57.045	Loxodonta_africana
ENSPMAG00000006035	-	72	68.003	ENSMFAG00000041354	CHD9	72	57.257	Macaca_fascicularis
ENSPMAG00000006035	-	72	68.003	ENSMMUG00000016310	CHD9	64	61.538	Macaca_mulatta
ENSPMAG00000006035	-	72	68.003	ENSMNEG00000031494	CHD9	66	57.257	Macaca_nemestrina
ENSPMAG00000006035	-	72	68.003	ENSMLEG00000043219	CHD9	64	61.538	Mandrillus_leucophaeus
ENSPMAG00000006035	-	86	69.671	ENSMZEG00005006581	chd9	60	69.671	Maylandia_zebra
ENSPMAG00000006035	-	72	67.900	ENSMICG00000016679	CHD9	65	61.905	Microcebus_murinus
ENSPMAG00000006035	-	90	66.747	ENSMODG00000013142	-	69	71.580	Monodelphis_domestica
ENSPMAG00000006035	-	72	67.309	MGP_CAROLIEiJ_G0031364	Chd9	59	57.455	Mus_caroli
ENSPMAG00000006035	-	72	67.120	ENSMUSG00000056608	Chd9	53	76.609	Mus_musculus
ENSPMAG00000006035	-	92	67.309	MGP_PahariEiJ_G0022964	Chd9	59	57.283	Mus_pahari
ENSPMAG00000006035	-	72	67.309	MGP_SPRETEiJ_G0032483	Chd9	59	57.126	Mus_spretus
ENSPMAG00000006035	-	72	67.739	ENSMPUG00000003285	CHD9	59	57.258	Mustela_putorius_furo
ENSPMAG00000006035	-	72	67.607	ENSMLUG00000004456	CHD9	59	56.472	Myotis_lucifugus
ENSPMAG00000006035	-	72	67.923	ENSNLEG00000001026	CHD9	66	57.290	Nomascus_leucogenys
ENSPMAG00000006035	-	72	67.444	ENSODEG00000004466	CHD9	59	57.004	Octodon_degus
ENSPMAG00000006035	-	72	67.739	ENSOCUG00000001016	CHD9	70	56.808	Oryctolagus_cuniculus
ENSPMAG00000006035	-	85	69.607	ENSORLG00000013810	chd9	50	69.064	Oryzias_latipes
ENSPMAG00000006035	-	85	69.694	ENSORLG00015019126	chd9	60	68.788	Oryzias_latipes_hsok
ENSPMAG00000006035	-	57	68.756	ENSOMEG00000015978	chd9	50	71.291	Oryzias_melastigma
ENSPMAG00000006035	-	72	67.794	ENSOGAG00000002110	CHD9	59	57.224	Otolemur_garnettii
ENSPMAG00000006035	-	72	67.576	ENSOARG00000017664	CHD9	59	57.429	Ovis_aries
ENSPMAG00000006035	-	72	67.923	ENSPPAG00000039388	-	72	57.233	Pan_paniscus
ENSPMAG00000006035	-	72	67.900	ENSPPRG00000004801	CHD9	65	61.905	Panthera_pardus
ENSPMAG00000006035	-	72	65.809	ENSPTIG00000021854	CHD9	63	52.747	Panthera_tigris_altaica
ENSPMAG00000006035	-	72	67.923	ENSPTRG00000008113	CHD9	65	61.538	Pan_troglodytes
ENSPMAG00000006035	-	72	67.897	ENSPANG00000019307	CHD9	71	57.094	Papio_anubis
ENSPMAG00000006035	-	88	70.265	ENSPKIG00000025401	-	54	69.912	Paramormyrops_kingsleyae
ENSPMAG00000006035	-	70	67.774	ENSPKIG00000021876	chd9	69	55.876	Paramormyrops_kingsleyae
ENSPMAG00000006035	-	57	70.722	ENSPSIG00000008099	CHD9	51	70.588	Pelodiscus_sinensis
ENSPMAG00000006035	-	53	54.455	ENSPMGG00000021802	chd9	64	57.544	Periophthalmus_magnuspinnatus
ENSPMAG00000006035	-	90	66.911	ENSPCIG00000017215	CHD9	71	69.584	Phascolarctos_cinereus
ENSPMAG00000006035	-	72	68.003	ENSPPYG00000007348	CHD9	59	57.306	Pongo_abelii
ENSPMAG00000006035	-	74	76.845	ENSPCAG00000007564	CHD9	50	76.845	Procavia_capensis
ENSPMAG00000006035	-	72	64.924	ENSPCOG00000028433	CHD9	65	61.538	Propithecus_coquereli
ENSPMAG00000006035	-	68	65.129	ENSPVAG00000015617	CHD9	56	65.129	Pteropus_vampyrus
ENSPMAG00000006035	-	72	64.045	ENSRNOG00000049302	Chd9	66	54.359	Rattus_norvegicus
ENSPMAG00000006035	-	72	67.843	ENSRBIG00000035553	CHD9	85	55.568	Rhinopithecus_bieti
ENSPMAG00000006035	-	72	67.923	ENSRROG00000033278	CHD9	72	57.200	Rhinopithecus_roxellana
ENSPMAG00000006035	-	72	68.035	ENSSBOG00000030240	CHD9	65	61.172	Saimiri_boliviensis_boliviensis
ENSPMAG00000006035	-	73	67.065	ENSSHAG00000002719	CHD9	59	56.318	Sarcophilus_harrisii
ENSPMAG00000006035	-	85	70.697	ENSSFOG00015001327	chd9	61	70.061	Scleropages_formosus
ENSPMAG00000006035	-	68	67.181	ENSSARG00000010632	CHD9	57	56.287	Sorex_araneus
ENSPMAG00000006035	-	92	67.014	ENSSSCG00000033591	CHD9	59	56.686	Sus_scrofa
ENSPMAG00000006035	-	72	67.849	ENSTGUG00000007476	CHD9	66	57.094	Taeniopygia_guttata
ENSPMAG00000006035	-	73	47.917	ENSTNIG00000003825	chd9	59	71.875	Tetraodon_nigroviridis
ENSPMAG00000006035	-	92	67.633	ENSTTRG00000012674	CHD9	59	56.422	Tursiops_truncatus
ENSPMAG00000006035	-	63	66.667	ENSUAMG00000022706	CHD9	84	56.345	Ursus_americanus
ENSPMAG00000006035	-	82	75.985	ENSUMAG00000004043	CHD9	70	75.985	Ursus_maritimus
ENSPMAG00000006035	-	72	65.245	ENSVPAG00000001374	CHD9	59	55.117	Vicugna_pacos
ENSPMAG00000006035	-	72	67.820	ENSVVUG00000019435	CHD9	59	57.487	Vulpes_vulpes
ENSPMAG00000006035	-	88	70.523	ENSXETG00000000349	chd9	56	70.472	Xenopus_tropicalis