EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMAG00000006112 (Gene tree)
Gene ID: -
Gene Symbol: ddx43
Alias: -
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 43
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 5848 bases
Position: chrGL491147:244-6091
Accession: ZDB-GENE-080204-77
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000006746	DEAD	PF00270.29	1.8e-38	1	1
ENSPMAP00000006743	DEAD	PF00270.29	3.8e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000006776	-	693	-	ENSPMAP00000006746	231 (aa)	-	S4RNG0
ENSPMAT00000006773	-	933	-	ENSPMAP00000006743	311 (aa)	-	S4RNF7

Gene Model

Click here to download ENSPMAG00000006112's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000006112's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMAG00000006112	ddx43	56	31.818	ENSPMAG00000009633	-	65	31.429

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000006112	ddx43	98	69.298	ENSAPLG00000010182	-	60	65.052	Anas_platyrhynchos
ENSPMAG00000006112	ddx43	98	71.053	ENSAMXG00000004457	ddx43	50	64.667	Astyanax_mexicanus
ENSPMAG00000006112	ddx43	100	52.586	WBGene00013214	Y54G11A.3	58	45.638	Caenorhabditis_elegans
ENSPMAG00000006112	ddx43	58	68.889	ENSCING00000008763	-	99	70.370	Ciona_intestinalis
ENSPMAG00000006112	ddx43	98	53.070	ENSETEG00000014626	-	51	50.558	Echinops_telfairi
ENSPMAG00000006112	ddx43	53	71.311	ENSEBUG00000000772	-	51	71.429	Eptatretus_burgeri
ENSPMAG00000006112	ddx43	98	68.421	ENSFHEG00000011226	ddx43	54	63.880	Fundulus_heteroclitus
ENSPMAG00000006112	ddx43	100	70.259	ENSGMOG00000004178	ddx43	63	62.199	Gadus_morhua
ENSPMAG00000006112	ddx43	98	67.982	ENSGALG00000015928	-	57	67.068	Gallus_gallus
ENSPMAG00000006112	ddx43	100	68.240	ENSGACG00000012072	ddx43	53	66.791	Gasterosteus_aculeatus
ENSPMAG00000006112	ddx43	100	68.240	ENSLBEG00000007913	ddx43	50	54.369	Labrus_bergylta
ENSPMAG00000006112	ddx43	100	71.552	ENSLACG00000000741	ddx43	59	67.820	Latimeria_chalumnae
ENSPMAG00000006112	ddx43	98	68.421	ENSMGAG00000013832	-	51	63.946	Meleagris_gallopavo
ENSPMAG00000006112	ddx43	98	68.860	ENSOANG00000006467	-	75	64.931	Ornithorhynchus_anatinus
ENSPMAG00000006112	ddx43	100	69.397	ENSPCIG00000017981	-	56	68.379	Phascolarctos_cinereus
ENSPMAG00000006112	ddx43	100	66.379	ENSSHAG00000016933	-	51	60.606	Sarcophilus_harrisii
ENSPMAG00000006112	ddx43	98	51.724	ENSSPUG00000018097	-	58	50.338	Sphenodon_punctatus
ENSPMAG00000006112	ddx43	100	68.240	ENSTNIG00000009822	ddx43	50	63.356	Tetraodon_nigroviridis