EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000006135 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 29232 bases
Position: chrGL476397:150121-179352
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000006769	DNA_pol_A_exo1	PF01612.20	1.9e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000006799	-	1665	-	ENSPMAP00000006769	555 (aa)	-	S4RNI3

Gene Model

Click here to download ENSPMAG00000006135's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000006135's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000006135	-	100	40.354	ENSG00000187609	EXD3	75	39.048	Homo_sapiens
ENSPMAG00000006135	-	99	37.896	ENSAPOG00000015520	exd3	69	37.896	Acanthochromis_polyacanthus
ENSPMAG00000006135	-	99	38.737	ENSACIG00000005561	exd3	64	38.128	Amphilophus_citrinellus
ENSPMAG00000006135	-	99	37.500	ENSAOCG00000007721	exd3	65	37.500	Amphiprion_ocellaris
ENSPMAG00000006135	-	99	37.667	ENSAPEG00000007019	exd3	66	37.667	Amphiprion_percula
ENSPMAG00000006135	-	99	36.020	ENSATEG00000019941	exd3	71	36.020	Anabas_testudineus
ENSPMAG00000006135	-	100	42.133	ENSAPLG00000015358	EXD3	79	42.328	Anas_platyrhynchos
ENSPMAG00000006135	-	65	41.795	ENSACAG00000014448	-	89	41.558	Anolis_carolinensis
ENSPMAG00000006135	-	100	38.045	ENSANAG00000019674	EXD3	65	38.636	Aotus_nancymaae
ENSPMAG00000006135	-	99	36.877	ENSACLG00000021922	exd3	67	37.129	Astatotilapia_calliptera
ENSPMAG00000006135	-	100	38.308	ENSAMXG00000019494	exd3	67	38.972	Astyanax_mexicanus
ENSPMAG00000006135	-	99	41.145	ENSBTAG00000023788	EXD3	66	41.145	Bos_taurus
ENSPMAG00000006135	-	100	39.161	ENSCJAG00000013170	EXD3	69	39.161	Callithrix_jacchus
ENSPMAG00000006135	-	100	40.741	ENSCAFG00000019444	EXD3	65	40.741	Canis_familiaris
ENSPMAG00000006135	-	100	40.105	ENSCAFG00020003171	EXD3	62	40.105	Canis_lupus_dingo
ENSPMAG00000006135	-	100	39.405	ENSCCAG00000027996	EXD3	64	39.405	Cebus_capucinus
ENSPMAG00000006135	-	100	40.418	ENSCSAG00000016661	EXD3	64	40.418	Chlorocebus_sabaeus
ENSPMAG00000006135	-	100	41.156	ENSCPBG00000011686	EXD3	72	40.646	Chrysemys_picta_bellii
ENSPMAG00000006135	-	99	31.185	ENSCING00000002195	-	68	31.185	Ciona_intestinalis
ENSPMAG00000006135	-	75	33.125	ENSCSAVG00000005704	-	85	34.365	Ciona_savignyi
ENSPMAG00000006135	-	100	40.455	ENSCANG00000040692	EXD3	65	40.592	Colobus_angolensis_palliatus
ENSPMAG00000006135	-	99	36.077	ENSCSEG00000000750	exd3	73	36.348	Cynoglossus_semilaevis
ENSPMAG00000006135	-	100	37.856	ENSCVAG00000011560	exd3	66	38.119	Cyprinodon_variegatus
ENSPMAG00000006135	-	99	39.100	ENSDARG00000063140	exd3	67	39.153	Danio_rerio
ENSPMAG00000006135	-	100	43.316	ENSEASG00005016023	EXD3	65	43.316	Equus_asinus_asinus
ENSPMAG00000006135	-	100	43.137	ENSECAG00000017546	EXD3	63	43.137	Equus_caballus
ENSPMAG00000006135	-	86	40.860	ENSEEUG00000000405	-	65	41.129	Erinaceus_europaeus
ENSPMAG00000006135	-	99	39.049	ENSELUG00000007181	exd3	66	39.219	Esox_lucius
ENSPMAG00000006135	-	100	38.380	ENSFCAG00000003579	EXD3	64	38.380	Felis_catus
ENSPMAG00000006135	-	100	43.056	ENSFALG00000005132	EXD3	71	42.882	Ficedula_albicollis
ENSPMAG00000006135	-	99	31.687	ENSFHEG00000011352	exd3	65	31.346	Fundulus_heteroclitus
ENSPMAG00000006135	-	71	32.323	ENSGMOG00000013542	-	88	32.323	Gadus_morhua
ENSPMAG00000006135	-	100	42.078	ENSGALG00000052646	EXD3	70	42.078	Gallus_gallus
ENSPMAG00000006135	-	100	35.836	ENSGAFG00000007328	exd3	65	35.836	Gambusia_affinis
ENSPMAG00000006135	-	100	36.934	ENSGACG00000017442	exd3	79	36.934	Gasterosteus_aculeatus
ENSPMAG00000006135	-	100	36.458	ENSGAGG00000011888	EXD3	73	36.458	Gopherus_agassizii
ENSPMAG00000006135	-	80	68.293	ENSGGOG00000024724	EXD3	58	68.293	Gorilla_gorilla
ENSPMAG00000006135	-	99	37.171	ENSHBUG00000001405	exd3	66	37.129	Haplochromis_burtoni
ENSPMAG00000006135	-	99	35.821	ENSHCOG00000020087	exd3	68	36.409	Hippocampus_comes
ENSPMAG00000006135	-	99	39.249	ENSIPUG00000020343	exd3	66	38.567	Ictalurus_punctatus
ENSPMAG00000006135	-	99	37.294	ENSKMAG00000011881	exd3	66	37.770	Kryptolebias_marmoratus
ENSPMAG00000006135	-	99	36.153	ENSLBEG00000004079	exd3	67	36.153	Labrus_bergylta
ENSPMAG00000006135	-	99	39.931	ENSLOCG00000002330	exd3	67	40.034	Lepisosteus_oculatus
ENSPMAG00000006135	-	100	39.336	ENSLAFG00000001122	EXD3	77	39.336	Loxodonta_africana
ENSPMAG00000006135	-	100	39.825	ENSMFAG00000037569	EXD3	64	39.825	Macaca_fascicularis
ENSPMAG00000006135	-	100	39.649	ENSMNEG00000033487	EXD3	64	39.649	Macaca_nemestrina
ENSPMAG00000006135	-	100	37.544	ENSMLEG00000040548	EXD3	63	37.544	Mandrillus_leucophaeus
ENSPMAG00000006135	-	100	35.362	ENSMAMG00000008407	exd3	74	35.526	Mastacembelus_armatus
ENSPMAG00000006135	-	99	36.877	ENSMZEG00005017270	exd3	66	37.129	Maylandia_zebra
ENSPMAG00000006135	-	100	42.783	ENSMGAG00000001267	EXD3	80	42.783	Meleagris_gallopavo
ENSPMAG00000006135	-	99	37.435	ENSMMOG00000021267	exd3	69	37.651	Mola_mola
ENSPMAG00000006135	-	54	40.683	ENSMODG00000028091	-	60	40.000	Monodelphis_domestica
ENSPMAG00000006135	-	99	35.880	ENSMALG00000018523	exd3	73	35.880	Monopterus_albus
ENSPMAG00000006135	-	100	37.871	ENSMPUG00000015130	EXD3	64	37.871	Mustela_putorius_furo
ENSPMAG00000006135	-	99	36.548	ENSNBRG00000019734	exd3	66	37.031	Neolamprologus_brichardi
ENSPMAG00000006135	-	100	40.212	ENSNLEG00000009095	-	75	40.212	Nomascus_leucogenys
ENSPMAG00000006135	-	99	36.975	ENSONIG00000003880	exd3	77	37.182	Oreochromis_niloticus
ENSPMAG00000006135	-	86	41.975	ENSOANG00000012485	-	66	41.429	Ornithorhynchus_anatinus
ENSPMAG00000006135	-	99	35.117	ENSORLG00000010377	exd3	73	35.655	Oryzias_latipes
ENSPMAG00000006135	-	99	35.392	ENSORLG00020012287	exd3	66	35.821	Oryzias_latipes_hni
ENSPMAG00000006135	-	99	35.117	ENSORLG00015001156	exd3	72	35.655	Oryzias_latipes_hsok
ENSPMAG00000006135	-	99	37.608	ENSOMEG00000023060	exd3	69	37.435	Oryzias_melastigma
ENSPMAG00000006135	-	100	39.965	ENSPPAG00000042435	EXD3	64	40.141	Pan_paniscus
ENSPMAG00000006135	-	100	37.871	ENSPPRG00000004634	EXD3	64	37.871	Panthera_pardus
ENSPMAG00000006135	-	100	39.324	ENSPANG00000026338	EXD3	64	39.324	Papio_anubis
ENSPMAG00000006135	-	100	40.480	ENSPKIG00000021103	exd3	68	38.832	Paramormyrops_kingsleyae
ENSPMAG00000006135	-	100	41.237	ENSPSIG00000007745	EXD3	67	40.893	Pelodiscus_sinensis
ENSPMAG00000006135	-	99	38.664	ENSPMGG00000023999	exd3	65	38.664	Periophthalmus_magnuspinnatus
ENSPMAG00000006135	-	100	40.171	ENSPCIG00000006180	-	69	40.171	Phascolarctos_cinereus
ENSPMAG00000006135	-	100	36.913	ENSPFOG00000019685	exd3	73	37.081	Poecilia_formosa
ENSPMAG00000006135	-	100	36.913	ENSPLAG00000022290	exd3	73	37.081	Poecilia_latipinna
ENSPMAG00000006135	-	100	37.081	ENSPMEG00000008007	exd3	73	37.248	Poecilia_mexicana
ENSPMAG00000006135	-	100	37.143	ENSPREG00000008142	exd3	73	37.311	Poecilia_reticulata
ENSPMAG00000006135	-	99	36.877	ENSPNYG00000012849	exd3	66	37.129	Pundamilia_nyererei
ENSPMAG00000006135	-	99	39.425	ENSPNAG00000016753	exd3	67	40.339	Pygocentrus_nattereri
ENSPMAG00000006135	-	100	40.489	ENSRBIG00000031855	EXD3	64	40.489	Rhinopithecus_bieti
ENSPMAG00000006135	-	100	40.314	ENSRROG00000040120	EXD3	65	40.314	Rhinopithecus_roxellana
ENSPMAG00000006135	-	100	38.462	ENSSBOG00000022389	EXD3	71	38.462	Saimiri_boliviensis_boliviensis
ENSPMAG00000006135	-	100	37.303	ENSSHAG00000001276	-	77	37.478	Sarcophilus_harrisii
ENSPMAG00000006135	-	99	40.407	ENSSFOG00015023063	exd3	67	40.407	Scleropages_formosus
ENSPMAG00000006135	-	100	35.255	ENSSMAG00000019809	exd3	66	35.953	Scophthalmus_maximus
ENSPMAG00000006135	-	100	35.880	ENSSDUG00000006265	exd3	73	35.953	Seriola_dumerili
ENSPMAG00000006135	-	100	35.117	ENSSLDG00000004671	exd3	72	35.786	Seriola_lalandi_dorsalis
ENSPMAG00000006135	-	99	36.013	ENSSPAG00000017972	exd3	66	36.181	Stegastes_partitus
ENSPMAG00000006135	-	100	41.489	ENSSSCG00000005855	EXD3	68	41.281	Sus_scrofa
ENSPMAG00000006135	-	100	43.585	ENSTGUG00000002494	EXD3	79	43.409	Taeniopygia_guttata
ENSPMAG00000006135	-	99	34.215	ENSTRUG00000010236	exd3	65	34.106	Takifugu_rubripes
ENSPMAG00000006135	-	99	38.014	ENSTNIG00000013212	exd3	73	37.949	Tetraodon_nigroviridis
ENSPMAG00000006135	-	100	38.664	ENSUAMG00000021470	EXD3	70	38.664	Ursus_americanus
ENSPMAG00000006135	-	100	40.035	ENSVVUG00000029403	EXD3	63	40.035	Vulpes_vulpes
ENSPMAG00000006135	-	100	37.186	ENSXMAG00000001467	exd3	73	37.186	Xiphophorus_maculatus