EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000006144 (Gene tree)
Gene ID: -
Gene Symbol: prpf6
Alias: -
Full Name: PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 13418 bases
Position: chrGL478691:35889-49306
Accession: ZDB-GENE-030131-2575
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000006818	PRP1_N	PF06424.12	1.9e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000006848	-	2856	-	ENSPMAP00000006818	949 (aa)	-	S4RNN2

Gene Model

Click here to download ENSPMAG00000006144's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000006144's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000006144	prpf6	99	87.779	ENSG00000101161	PRPF6	99	87.779	Homo_sapiens
ENSPMAG00000006144	prpf6	100	87.882	ENSAPOG00000010395	prpf6	97	87.882	Acanthochromis_polyacanthus
ENSPMAG00000006144	prpf6	99	86.814	ENSAMEG00000001916	PRPF6	99	86.814	Ailuropoda_melanoleuca
ENSPMAG00000006144	prpf6	100	88.093	ENSACIG00000019862	prpf6	97	88.093	Amphilophus_citrinellus
ENSPMAG00000006144	prpf6	100	87.882	ENSAOCG00000012988	prpf6	97	87.882	Amphiprion_ocellaris
ENSPMAG00000006144	prpf6	99	82.090	ENSAPEG00000008301	prpf6	99	82.090	Amphiprion_percula
ENSPMAG00000006144	prpf6	100	87.671	ENSATEG00000005581	prpf6	97	87.671	Anabas_testudineus
ENSPMAG00000006144	prpf6	99	88.105	ENSACAG00000006464	PRPF6	97	87.552	Anolis_carolinensis
ENSPMAG00000006144	prpf6	99	88.310	ENSANAG00000012661	PRPF6	99	88.928	Aotus_nancymaae
ENSPMAG00000006144	prpf6	100	87.777	ENSACLG00000025875	prpf6	98	87.147	Astatotilapia_calliptera
ENSPMAG00000006144	prpf6	100	86.134	ENSAMXG00000001929	prpf6	97	86.134	Astyanax_mexicanus
ENSPMAG00000006144	prpf6	99	88.417	ENSBTAG00000011656	PRPF6	99	88.417	Bos_taurus
ENSPMAG00000006144	prpf6	99	88.310	ENSCJAG00000010616	PRPF6	99	88.310	Callithrix_jacchus
ENSPMAG00000006144	prpf6	99	88.523	ENSCAFG00000013165	PRPF6	99	88.523	Canis_familiaris
ENSPMAG00000006144	prpf6	99	88.523	ENSCAFG00020002050	PRPF6	99	88.523	Canis_lupus_dingo
ENSPMAG00000006144	prpf6	99	88.417	ENSCHIG00000018187	PRPF6	99	88.417	Capra_hircus
ENSPMAG00000006144	prpf6	99	88.523	ENSTSYG00000007814	PRPF6	99	88.523	Carlito_syrichta
ENSPMAG00000006144	prpf6	97	87.269	ENSCAPG00000015077	PRPF6	100	86.942	Cavia_aperea
ENSPMAG00000006144	prpf6	99	88.310	ENSCPOG00000007518	PRPF6	99	88.310	Cavia_porcellus
ENSPMAG00000006144	prpf6	99	85.016	ENSCCAG00000024564	PRPF6	99	85.016	Cebus_capucinus
ENSPMAG00000006144	prpf6	99	87.885	ENSCATG00000037473	PRPF6	99	87.885	Cercocebus_atys
ENSPMAG00000006144	prpf6	99	84.803	ENSCLAG00000003854	PRPF6	99	84.803	Chinchilla_lanigera
ENSPMAG00000006144	prpf6	99	83.983	ENSCSAG00000016742	PRPF6	99	83.983	Chlorocebus_sabaeus
ENSPMAG00000006144	prpf6	84	74.188	ENSCHOG00000003315	-	99	73.970	Choloepus_hoffmanni
ENSPMAG00000006144	prpf6	99	87.618	ENSCPBG00000013964	PRPF6	97	87.618	Chrysemys_picta_bellii
ENSPMAG00000006144	prpf6	100	72.576	ENSCING00000008817	-	100	72.576	Ciona_intestinalis
ENSPMAG00000006144	prpf6	99	87.673	ENSCANG00000038230	PRPF6	99	87.673	Colobus_angolensis_palliatus
ENSPMAG00000006144	prpf6	99	88.523	ENSCGRG00001022666	Prpf6	99	88.523	Cricetulus_griseus_chok1gshd
ENSPMAG00000006144	prpf6	99	83.087	ENSCSEG00000018561	prpf6	99	83.087	Cynoglossus_semilaevis
ENSPMAG00000006144	prpf6	99	88.593	ENSCVAG00000010550	prpf6	96	88.593	Cyprinodon_variegatus
ENSPMAG00000006144	prpf6	100	86.540	ENSDARG00000091367	prpf6	100	86.540	Danio_rerio
ENSPMAG00000006144	prpf6	99	88.842	ENSDNOG00000040544	PRPF6	99	88.842	Dasypus_novemcinctus
ENSPMAG00000006144	prpf6	90	88.345	ENSDORG00000005406	Prpf6	100	88.345	Dipodomys_ordii
ENSPMAG00000006144	prpf6	98	71.613	FBgn0036828	CG6841	99	70.582	Drosophila_melanogaster
ENSPMAG00000006144	prpf6	84	89.327	ENSETEG00000004447	PRPF6	84	89.327	Echinops_telfairi
ENSPMAG00000006144	prpf6	99	88.759	ENSEBUG00000008835	prpf6	99	88.759	Eptatretus_burgeri
ENSPMAG00000006144	prpf6	99	88.417	ENSEASG00005023115	PRPF6	99	88.417	Equus_asinus_asinus
ENSPMAG00000006144	prpf6	99	84.272	ENSECAG00000013983	PRPF6	99	84.272	Equus_caballus
ENSPMAG00000006144	prpf6	87	87.298	ENSEEUG00000000180	PRPF6	81	90.909	Erinaceus_europaeus
ENSPMAG00000006144	prpf6	100	86.632	ENSELUG00000001945	prpf6	94	86.632	Esox_lucius
ENSPMAG00000006144	prpf6	99	88.629	ENSFCAG00000001183	PRPF6	99	88.629	Felis_catus
ENSPMAG00000006144	prpf6	99	82.641	ENSFALG00000006046	-	97	82.641	Ficedula_albicollis
ENSPMAG00000006144	prpf6	99	88.417	ENSFALG00000010326	-	97	88.417	Ficedula_albicollis
ENSPMAG00000006144	prpf6	99	86.915	ENSFDAG00000006451	PRPF6	100	87.783	Fukomys_damarensis
ENSPMAG00000006144	prpf6	99	88.806	ENSFHEG00000000560	prpf6	96	88.806	Fundulus_heteroclitus
ENSPMAG00000006144	prpf6	99	86.596	ENSGMOG00000015622	prpf6	99	86.596	Gadus_morhua
ENSPMAG00000006144	prpf6	99	88.417	ENSGALG00000006001	PRPF6	99	88.417	Gallus_gallus
ENSPMAG00000006144	prpf6	100	83.983	ENSGAFG00000021109	prpf6	98	83.386	Gambusia_affinis
ENSPMAG00000006144	prpf6	99	87.340	ENSGACG00000002576	prpf6	99	87.340	Gasterosteus_aculeatus
ENSPMAG00000006144	prpf6	99	87.723	ENSGAGG00000008653	PRPF6	97	87.723	Gopherus_agassizii
ENSPMAG00000006144	prpf6	99	87.779	ENSGGOG00000016876	PRPF6	99	87.779	Gorilla_gorilla
ENSPMAG00000006144	prpf6	100	87.777	ENSHBUG00000004496	prpf6	98	87.147	Haplochromis_burtoni
ENSPMAG00000006144	prpf6	99	88.204	ENSHGLG00000009222	PRPF6	99	88.204	Heterocephalus_glaber_female
ENSPMAG00000006144	prpf6	97	88.139	ENSHGLG00100016600	PRPF6	100	88.139	Heterocephalus_glaber_male
ENSPMAG00000006144	prpf6	99	87.220	ENSHCOG00000011513	prpf6	98	85.908	Hippocampus_comes
ENSPMAG00000006144	prpf6	99	87.553	ENSIPUG00000004912	prpf6	96	87.553	Ictalurus_punctatus
ENSPMAG00000006144	prpf6	99	85.987	ENSSTOG00000002922	PRPF6	99	85.456	Ictidomys_tridecemlineatus
ENSPMAG00000006144	prpf6	99	88.310	ENSJJAG00000000836	Prpf6	99	88.310	Jaculus_jaculus
ENSPMAG00000006144	prpf6	100	87.671	ENSKMAG00000017800	prpf6	97	87.671	Kryptolebias_marmoratus
ENSPMAG00000006144	prpf6	99	87.527	ENSLBEG00000012582	prpf6	98	86.131	Labrus_bergylta
ENSPMAG00000006144	prpf6	99	87.342	ENSLOCG00000004827	prpf6	97	86.120	Lepisosteus_oculatus
ENSPMAG00000006144	prpf6	99	88.310	ENSLAFG00000005272	PRPF6	99	88.310	Loxodonta_africana
ENSPMAG00000006144	prpf6	99	87.673	ENSMFAG00000037542	PRPF6	99	87.673	Macaca_fascicularis
ENSPMAG00000006144	prpf6	99	81.529	ENSMMUG00000015558	PRPF6	98	88.083	Macaca_mulatta
ENSPMAG00000006144	prpf6	99	75.607	ENSMNEG00000045555	PRPF6	99	75.607	Macaca_nemestrina
ENSPMAG00000006144	prpf6	100	87.671	ENSMAMG00000010718	prpf6	98	87.147	Mastacembelus_armatus
ENSPMAG00000006144	prpf6	93	87.670	ENSMZEG00005026539	prpf6	100	87.670	Maylandia_zebra
ENSPMAG00000006144	prpf6	100	87.263	ENSMZEG00005015261	-	100	87.263	Maylandia_zebra
ENSPMAG00000006144	prpf6	97	88.357	ENSMGAG00000006634	PRPF6	100	88.357	Meleagris_gallopavo
ENSPMAG00000006144	prpf6	99	88.523	ENSMAUG00000013969	Prpf6	99	88.523	Mesocricetus_auratus
ENSPMAG00000006144	prpf6	87	88.350	ENSMICG00000017793	PRPF6	98	88.329	Microcebus_murinus
ENSPMAG00000006144	prpf6	99	88.523	ENSMOCG00000001701	Prpf6	99	88.523	Microtus_ochrogaster
ENSPMAG00000006144	prpf6	99	87.540	ENSMMOG00000020419	prpf6	99	87.540	Mola_mola
ENSPMAG00000006144	prpf6	96	87.683	ENSMODG00000017051	PRPF6	99	87.683	Monodelphis_domestica
ENSPMAG00000006144	prpf6	98	88.065	ENSMALG00000000089	prpf6	100	88.065	Monopterus_albus
ENSPMAG00000006144	prpf6	99	82.147	MGP_CAROLIEiJ_G0024814	Prpf6	99	81.828	Mus_caroli
ENSPMAG00000006144	prpf6	99	88.523	ENSMUSG00000002455	Prpf6	99	88.523	Mus_musculus
ENSPMAG00000006144	prpf6	99	88.523	MGP_PahariEiJ_G0026262	Prpf6	99	88.523	Mus_pahari
ENSPMAG00000006144	prpf6	99	88.523	MGP_SPRETEiJ_G0025741	Prpf6	99	88.523	Mus_spretus
ENSPMAG00000006144	prpf6	90	88.228	ENSMPUG00000008673	PRPF6	99	88.228	Mustela_putorius_furo
ENSPMAG00000006144	prpf6	99	88.417	ENSNGAG00000003365	Prpf6	99	88.417	Nannospalax_galili
ENSPMAG00000006144	prpf6	100	87.882	ENSNBRG00000015025	prpf6	98	87.252	Neolamprologus_brichardi
ENSPMAG00000006144	prpf6	99	87.673	ENSNLEG00000010208	PRPF6	99	87.673	Nomascus_leucogenys
ENSPMAG00000006144	prpf6	99	81.325	ENSMEUG00000009824	-	90	81.621	Notamacropus_eugenii
ENSPMAG00000006144	prpf6	99	82.891	ENSODEG00000004841	PRPF6	99	82.891	Octodon_degus
ENSPMAG00000006144	prpf6	100	87.777	ENSONIG00000017406	prpf6	98	87.147	Oreochromis_niloticus
ENSPMAG00000006144	prpf6	99	88.417	ENSOANG00000004920	PRPF6	99	88.417	Ornithorhynchus_anatinus
ENSPMAG00000006144	prpf6	98	87.366	ENSOCUG00000014151	PRPF6	100	87.366	Oryctolagus_cuniculus
ENSPMAG00000006144	prpf6	99	88.486	ENSORLG00000009592	prpf6	98	87.070	Oryzias_latipes
ENSPMAG00000006144	prpf6	99	88.380	ENSORLG00020001458	prpf6	98	86.966	Oryzias_latipes_hni
ENSPMAG00000006144	prpf6	99	88.380	ENSORLG00015018762	prpf6	98	86.966	Oryzias_latipes_hsok
ENSPMAG00000006144	prpf6	99	88.486	ENSOMEG00000012174	prpf6	96	88.486	Oryzias_melastigma
ENSPMAG00000006144	prpf6	99	81.635	ENSOGAG00000007573	PRPF6	99	81.635	Otolemur_garnettii
ENSPMAG00000006144	prpf6	99	87.579	ENSOARG00000008776	PRPF6	100	87.579	Ovis_aries
ENSPMAG00000006144	prpf6	99	87.779	ENSPPAG00000008686	PRPF6	99	87.779	Pan_paniscus
ENSPMAG00000006144	prpf6	99	88.629	ENSPPRG00000008497	PRPF6	99	88.629	Panthera_pardus
ENSPMAG00000006144	prpf6	97	88.575	ENSPTIG00000011184	PRPF6	97	88.575	Panthera_tigris_altaica
ENSPMAG00000006144	prpf6	99	87.779	ENSPTRG00000013765	PRPF6	99	87.779	Pan_troglodytes
ENSPMAG00000006144	prpf6	99	87.460	ENSPANG00000024135	PRPF6	99	87.460	Papio_anubis
ENSPMAG00000006144	prpf6	99	87.566	ENSPKIG00000005627	prpf6	99	87.566	Paramormyrops_kingsleyae
ENSPMAG00000006144	prpf6	91	88.364	ENSPSIG00000007717	PRPF6	100	87.896	Pelodiscus_sinensis
ENSPMAG00000006144	prpf6	100	85.594	ENSPMGG00000008925	prpf6	97	85.489	Periophthalmus_magnuspinnatus
ENSPMAG00000006144	prpf6	99	88.523	ENSPEMG00000016036	Prpf6	99	88.523	Peromyscus_maniculatus_bairdii
ENSPMAG00000006144	prpf6	99	88.523	ENSPCIG00000017909	PRPF6	99	88.523	Phascolarctos_cinereus
ENSPMAG00000006144	prpf6	100	87.684	ENSPFOG00000006431	prpf6	97	87.056	Poecilia_formosa
ENSPMAG00000006144	prpf6	100	87.777	ENSPLAG00000005974	prpf6	98	87.147	Poecilia_latipinna
ENSPMAG00000006144	prpf6	100	88.093	ENSPMEG00000009977	prpf6	98	87.461	Poecilia_mexicana
ENSPMAG00000006144	prpf6	100	87.987	ENSPREG00000017993	prpf6	93	87.356	Poecilia_reticulata
ENSPMAG00000006144	prpf6	99	87.248	ENSPPYG00000011256	PRPF6	99	87.248	Pongo_abelii
ENSPMAG00000006144	prpf6	94	90.265	ENSPCAG00000006536	PRPF6	88	90.265	Procavia_capensis
ENSPMAG00000006144	prpf6	99	88.417	ENSPCOG00000016881	PRPF6	99	88.417	Propithecus_coquereli
ENSPMAG00000006144	prpf6	99	83.528	ENSPVAG00000014316	PRPF6	99	83.528	Pteropus_vampyrus
ENSPMAG00000006144	prpf6	100	74.948	ENSPNYG00000001939	prpf6	98	76.803	Pundamilia_nyererei
ENSPMAG00000006144	prpf6	99	87.131	ENSPNAG00000015606	prpf6	97	87.131	Pygocentrus_nattereri
ENSPMAG00000006144	prpf6	99	88.417	ENSRNOG00000051498	Prpf6	99	88.417	Rattus_norvegicus
ENSPMAG00000006144	prpf6	99	87.673	ENSRBIG00000043613	PRPF6	99	87.673	Rhinopithecus_bieti
ENSPMAG00000006144	prpf6	99	84.550	ENSRROG00000040969	PRPF6	98	86.724	Rhinopithecus_roxellana
ENSPMAG00000006144	prpf6	89	84.392	ENSSBOG00000020632	PRPF6	93	82.241	Saimiri_boliviensis_boliviensis
ENSPMAG00000006144	prpf6	99	88.523	ENSSHAG00000016810	PRPF6	99	88.523	Sarcophilus_harrisii
ENSPMAG00000006144	prpf6	98	87.661	ENSSFOG00015020859	prpf6	100	87.661	Scleropages_formosus
ENSPMAG00000006144	prpf6	100	86.828	ENSSMAG00000008112	prpf6	97	86.828	Scophthalmus_maximus
ENSPMAG00000006144	prpf6	100	87.566	ENSSDUG00000016142	prpf6	98	86.938	Seriola_dumerili
ENSPMAG00000006144	prpf6	100	87.566	ENSSLDG00000025283	prpf6	98	86.938	Seriola_lalandi_dorsalis
ENSPMAG00000006144	prpf6	91	87.788	ENSSPUG00000018260	PRPF6	100	87.330	Sphenodon_punctatus
ENSPMAG00000006144	prpf6	100	87.777	ENSSPAG00000015850	prpf6	97	87.777	Stegastes_partitus
ENSPMAG00000006144	prpf6	99	87.684	ENSSSCG00000029119	PRPF6	100	87.670	Sus_scrofa
ENSPMAG00000006144	prpf6	99	88.523	ENSTGUG00000007221	PRPF6	99	88.523	Taeniopygia_guttata
ENSPMAG00000006144	prpf6	100	87.355	ENSTRUG00000002920	prpf6	97	87.355	Takifugu_rubripes
ENSPMAG00000006144	prpf6	99	82.328	ENSTNIG00000017873	prpf6	99	82.328	Tetraodon_nigroviridis
ENSPMAG00000006144	prpf6	88	85.083	ENSTBEG00000005348	PRPF6	85	85.083	Tupaia_belangeri
ENSPMAG00000006144	prpf6	99	88.204	ENSTTRG00000013068	PRPF6	99	88.204	Tursiops_truncatus
ENSPMAG00000006144	prpf6	97	86.942	ENSUMAG00000021631	PRPF6	98	86.876	Ursus_maritimus
ENSPMAG00000006144	prpf6	99	88.523	ENSVVUG00000014948	PRPF6	99	88.523	Vulpes_vulpes
ENSPMAG00000006144	prpf6	99	87.553	ENSXETG00000012054	prpf6	97	87.553	Xenopus_tropicalis
ENSPMAG00000006144	prpf6	100	87.987	ENSXCOG00000008082	prpf6	98	87.356	Xiphophorus_couchianus
ENSPMAG00000006144	prpf6	100	87.987	ENSXMAG00000015581	prpf6	97	87.987	Xiphophorus_maculatus