EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMAG00000006166 (Gene tree)
Gene ID: -
Gene Symbol: zgc:162396 (1 of many)
Alias: -
Full Name: zgc:162396
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 10998 bases
Position: chrGL477983:33404-44401
Accession: ZDB-GENE-030131-1190
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000006794	Methyltransf_31	PF13847.6	4.6e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000006824	-	600	-	ENSPMAP00000006794	199 (aa)	-	S4RNK8

Gene Model

Click here to download ENSPMAG00000006166's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000006166's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMAG00000006166	zgc:162396	100	88.945	ENSPMAG00000004744	zgc:162396	86	88.945
ENSPMAG00000006166	zgc:162396	100	46.734	ENSPMAG00000003743	zgc:162396	82	46.734

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000006166	zgc:162396	100	41.262	ENSAPOG00000015421	zgc:162396	74	41.262	Acanthochromis_polyacanthus
ENSPMAG00000006166	zgc:162396	100	40.976	ENSACIG00000015427	zgc:162396	74	40.976	Amphilophus_citrinellus
ENSPMAG00000006166	zgc:162396	100	40.500	ENSAOCG00000004131	zgc:162396	74	40.500	Amphiprion_ocellaris
ENSPMAG00000006166	zgc:162396	100	41.000	ENSAPEG00000008189	zgc:162396	74	41.000	Amphiprion_percula
ENSPMAG00000006166	zgc:162396	100	42.157	ENSATEG00000011813	zgc:162396	72	42.157	Anabas_testudineus
ENSPMAG00000006166	zgc:162396	100	46.766	ENSAPLG00000012593	-	74	46.766	Anas_platyrhynchos
ENSPMAG00000006166	zgc:162396	100	42.857	ENSACLG00000006906	zgc:162396	74	42.857	Astatotilapia_calliptera
ENSPMAG00000006166	zgc:162396	100	37.688	ENSAMXG00000037578	zgc:162396	79	37.688	Astyanax_mexicanus
ENSPMAG00000006166	zgc:162396	100	41.709	ENSAMXG00000030552	zgc:162396	73	41.709	Astyanax_mexicanus
ENSPMAG00000006166	zgc:162396	100	48.684	ENSCPBG00000002804	-	73	48.684	Chrysemys_picta_bellii
ENSPMAG00000006166	zgc:162396	99	33.663	ENSCING00000014393	-	86	33.663	Ciona_intestinalis
ENSPMAG00000006166	zgc:162396	89	32.778	ENSCING00000012960	-	66	32.778	Ciona_intestinalis
ENSPMAG00000006166	zgc:162396	100	43.137	ENSCVAG00000021429	zgc:162396	74	43.137	Cyprinodon_variegatus
ENSPMAG00000006166	zgc:162396	100	41.709	ENSDARG00000069549	zgc:162396	73	41.709	Danio_rerio
ENSPMAG00000006166	zgc:162396	100	41.206	ENSELUG00000005372	zgc:162396	73	41.206	Esox_lucius
ENSPMAG00000006166	zgc:162396	100	45.274	ENSFALG00000012826	-	73	45.274	Ficedula_albicollis
ENSPMAG00000006166	zgc:162396	100	43.627	ENSFHEG00000005224	-	82	43.627	Fundulus_heteroclitus
ENSPMAG00000006166	zgc:162396	100	46.231	ENSGALG00000047535	-	73	46.231	Gallus_gallus
ENSPMAG00000006166	zgc:162396	100	46.231	ENSGALG00000042073	-	73	46.231	Gallus_gallus
ENSPMAG00000006166	zgc:162396	100	46.231	ENSGALG00000050548	-	73	46.231	Gallus_gallus
ENSPMAG00000006166	zgc:162396	100	41.951	ENSGAFG00000018387	-	74	41.951	Gambusia_affinis
ENSPMAG00000006166	zgc:162396	100	40.394	ENSGACG00000002200	zgc:162396	71	40.394	Gasterosteus_aculeatus
ENSPMAG00000006166	zgc:162396	63	52.381	ENSGAGG00000004677	-	76	52.381	Gopherus_agassizii
ENSPMAG00000006166	zgc:162396	100	42.365	ENSHBUG00000017584	zgc:162396	74	42.365	Haplochromis_burtoni
ENSPMAG00000006166	zgc:162396	100	43.719	ENSIPUG00000001213	-	73	43.719	Ictalurus_punctatus
ENSPMAG00000006166	zgc:162396	100	43.216	ENSIPUG00000001171	-	73	43.216	Ictalurus_punctatus
ENSPMAG00000006166	zgc:162396	100	39.698	ENSIPUG00000001159	zgc:162396	73	39.698	Ictalurus_punctatus
ENSPMAG00000006166	zgc:162396	100	40.394	ENSKMAG00000018426	-	74	40.394	Kryptolebias_marmoratus
ENSPMAG00000006166	zgc:162396	100	41.379	ENSLBEG00000026502	zgc:162396	74	41.379	Labrus_bergylta
ENSPMAG00000006166	zgc:162396	100	41.294	ENSLACG00000009261	-	74	41.294	Latimeria_chalumnae
ENSPMAG00000006166	zgc:162396	100	39.901	ENSMAMG00000013213	zgc:162396	74	39.901	Mastacembelus_armatus
ENSPMAG00000006166	zgc:162396	100	42.857	ENSMZEG00005000798	zgc:162396	74	42.857	Maylandia_zebra
ENSPMAG00000006166	zgc:162396	100	44.059	ENSMGAG00000003269	-	74	44.059	Meleagris_gallopavo
ENSPMAG00000006166	zgc:162396	100	41.872	ENSMMOG00000005445	zgc:162396	74	41.872	Mola_mola
ENSPMAG00000006166	zgc:162396	100	42.365	ENSNBRG00000014954	zgc:162396	74	42.365	Neolamprologus_brichardi
ENSPMAG00000006166	zgc:162396	100	43.350	ENSONIG00000004463	zgc:162396	74	43.350	Oreochromis_niloticus
ENSPMAG00000006166	zgc:162396	74	36.735	ENSOANG00000015675	-	83	36.735	Ornithorhynchus_anatinus
ENSPMAG00000006166	zgc:162396	100	43.719	ENSOANG00000021828	-	71	43.719	Ornithorhynchus_anatinus
ENSPMAG00000006166	zgc:162396	100	43.137	ENSORLG00015008543	zgc:162396	74	43.137	Oryzias_latipes_hsok
ENSPMAG00000006166	zgc:162396	100	43.137	ENSOMEG00000010640	zgc:162396	81	43.137	Oryzias_melastigma
ENSPMAG00000006166	zgc:162396	100	39.500	ENSPKIG00000014798	zgc:162396	84	39.500	Paramormyrops_kingsleyae
ENSPMAG00000006166	zgc:162396	100	43.216	ENSPSIG00000016701	-	73	43.216	Pelodiscus_sinensis
ENSPMAG00000006166	zgc:162396	100	41.262	ENSPFOG00000002666	zgc:162396	74	41.262	Poecilia_formosa
ENSPMAG00000006166	zgc:162396	100	41.748	ENSPLAG00000010281	zgc:162396	74	41.748	Poecilia_latipinna
ENSPMAG00000006166	zgc:162396	100	42.233	ENSPMEG00000002349	zgc:162396	74	42.233	Poecilia_mexicana
ENSPMAG00000006166	zgc:162396	100	42.439	ENSPREG00000016491	zgc:162396	74	42.439	Poecilia_reticulata
ENSPMAG00000006166	zgc:162396	100	42.857	ENSPNYG00000009858	zgc:162396	74	42.857	Pundamilia_nyererei
ENSPMAG00000006166	zgc:162396	100	42.714	ENSPNAG00000026074	zgc:162396	73	42.714	Pygocentrus_nattereri
ENSPMAG00000006166	zgc:162396	100	41.709	ENSPNAG00000004920	zgc:162396	74	41.709	Pygocentrus_nattereri
ENSPMAG00000006166	zgc:162396	100	42.714	ENSSFOG00015023503	zgc:162396	73	42.714	Scleropages_formosus
ENSPMAG00000006166	zgc:162396	100	44.724	ENSSFOG00015023495	zgc:162396	73	44.724	Scleropages_formosus
ENSPMAG00000006166	zgc:162396	100	43.000	ENSSMAG00000004484	zgc:162396	74	43.000	Scophthalmus_maximus
ENSPMAG00000006166	zgc:162396	100	42.857	ENSSDUG00000010278	zgc:162396	74	42.857	Seriola_dumerili
ENSPMAG00000006166	zgc:162396	100	43.350	ENSSLDG00000021423	zgc:162396	74	43.350	Seriola_lalandi_dorsalis
ENSPMAG00000006166	zgc:162396	100	44.776	ENSSPUG00000015532	-	62	44.776	Sphenodon_punctatus
ENSPMAG00000006166	zgc:162396	100	43.564	ENSSPAG00000005505	zgc:162396	74	43.564	Stegastes_partitus
ENSPMAG00000006166	zgc:162396	79	40.000	ENSTGUG00000015044	-	84	40.000	Taeniopygia_guttata
ENSPMAG00000006166	zgc:162396	100	42.786	ENSTGUG00000003861	-	74	42.786	Taeniopygia_guttata
ENSPMAG00000006166	zgc:162396	98	39.286	ENSTRUG00000007506	zgc:162396	74	39.286	Takifugu_rubripes
ENSPMAG00000006166	zgc:162396	100	39.806	ENSTRUG00000010648	-	73	39.806	Takifugu_rubripes
ENSPMAG00000006166	zgc:162396	100	34.804	ENSTNIG00000001485	zgc:162396	74	34.804	Tetraodon_nigroviridis
ENSPMAG00000006166	zgc:162396	100	34.171	ENSXETG00000033236	-	67	34.171	Xenopus_tropicalis
ENSPMAG00000006166	zgc:162396	97	41.500	ENSXCOG00000014529	zgc:162396	72	41.500	Xiphophorus_couchianus
ENSPMAG00000006166	zgc:162396	100	41.463	ENSXMAG00000023129	zgc:162396	74	41.463	Xiphophorus_maculatus