EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPMAG00000006171 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Petromyzon_marinus
Status
putative
Strand
Minus strand
Length
17070 bases
Position
chrGL476370:610756-627825
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPMAP00000006828MMR_HSR1PF01926.233e-0511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPMAT00000006858-720-ENSPMAP00000006828212 (aa)-S4RNP2
Gene Model
Click here to download ENSPMAG00000006171's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000006171's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPMAG00000006171-7232.903ENSPMAG00000000465MRAS8133.728
ENSPMAG00000006171-7842.771ENSPMAG00000001399rab5c7942.771
ENSPMAG00000006171-5430.769ENSPMAG00000010406ARL4A5830.769
ENSPMAG00000006171-8036.000ENSPMAG00000004657rab367336.000
ENSPMAG00000006171-7531.677ENSPMAG00000000547rheb8731.677
ENSPMAG00000006171-9959.716ENSPMAG00000002006-9759.716
ENSPMAG00000006171-7732.927ENSPMAG00000004548hrasb9133.523
ENSPMAG00000006171-7933.721ENSPMAG00000005573dnajc276233.721
ENSPMAG00000006171-7535.802ENSPMAG00000006671si:cabz01085950.18035.802
ENSPMAG00000006171-7641.667ENSPMAG00000007247rab33ba6941.667
ENSPMAG00000006171-9944.286ENSPMAG00000001801rab1ba9744.286
ENSPMAG00000006171-8495.531ENSPMAG00000008764RAB2B9795.531
ENSPMAG00000006171-5536.207ENSPMAG00000004439rab205336.752
ENSPMAG00000006171-7756.364ENSPMAG00000005938-9956.364
ENSPMAG00000006171-7541.176ENSPMAG00000005537rab27a7741.176
ENSPMAG00000006171-9740.580ENSPMAG00000000008rab5c8840.580
ENSPMAG00000006171-7754.878ENSPMAG00000009335-7954.878
ENSPMAG00000006171-7333.121ENSPMAG00000005048MRAS8034.337
ENSPMAG00000006171-7642.857ENSPMAG00000001403-8042.857
ENSPMAG00000006171-7433.333ENSPMAG00000006835-7133.929
ENSPMAG00000006171-8942.857ENSPMAG00000007867rab5c8842.857
ENSPMAG00000006171-9744.928ENSPMAG00000005322rab18b9344.928
ENSPMAG00000006171-9843.541ENSPMAG00000006105rab309543.541
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPMAG00000006171-10084.259ENSG00000129472RAB2B10093.548Homo_sapiens
ENSPMAG00000006171-10092.925ENSG00000104388RAB2A10092.925Homo_sapiens
ENSPMAG00000006171-10091.981ENSAPOG00000009138rab2a10091.981Acanthochromis_polyacanthus
ENSPMAG00000006171-10085.185ENSAMEG00000006285RAB2B10085.185Ailuropoda_melanoleuca
ENSPMAG00000006171-10091.981ENSAOCG00000014658rab2a10091.981Amphiprion_ocellaris
ENSPMAG00000006171-10091.981ENSAPEG00000010294rab2a10091.981Amphiprion_percula
ENSPMAG00000006171-10091.981ENSATEG00000002553rab2a9895.918Anabas_testudineus
ENSPMAG00000006171-9272.959ENSACAG00000003034RAB2B9472.959Anolis_carolinensis
ENSPMAG00000006171-10092.925ENSACAG00000005694RAB2A10092.925Anolis_carolinensis
ENSPMAG00000006171-10084.259ENSANAG00000018900RAB2B10084.259Aotus_nancymaae
ENSPMAG00000006171-10092.925ENSANAG00000035405RAB2A10092.925Aotus_nancymaae
ENSPMAG00000006171-10092.925ENSAMXG00000036772rab2a10092.925Astyanax_mexicanus
ENSPMAG00000006171-10084.722ENSBTAG00000044207RAB2B10084.722Bos_taurus
ENSPMAG00000006171-10082.547ENSBTAG00000000948RAB2A10082.547Bos_taurus
ENSPMAG00000006171-9294.898WBGene00006833unc-10810088.785Caenorhabditis_elegans
ENSPMAG00000006171-10084.259ENSCJAG00000008981RAB2B10084.259Callithrix_jacchus
ENSPMAG00000006171-10092.925ENSCAFG00000007153RAB2A9192.925Canis_familiaris
ENSPMAG00000006171-10085.185ENSCAFG00000005641RAB2B10085.185Canis_familiaris
ENSPMAG00000006171-9692.647ENSCAFG00020021797-9392.647Canis_lupus_dingo
ENSPMAG00000006171-10093.396ENSCHIG00000020374RAB2A10093.396Capra_hircus
ENSPMAG00000006171-10085.514ENSCHIG00000017531-10085.514Capra_hircus
ENSPMAG00000006171-10092.925ENSTSYG00000030301RAB2A10092.925Carlito_syrichta
ENSPMAG00000006171-10083.796ENSTSYG00000033832RAB2B10083.796Carlito_syrichta
ENSPMAG00000006171-10084.259ENSCPOG00000026575RAB2B10084.259Cavia_porcellus
ENSPMAG00000006171-10068.056ENSCCAG00000028745RAB2B10068.056Cebus_capucinus
ENSPMAG00000006171-10092.925ENSCCAG00000025945RAB2A10092.925Cebus_capucinus
ENSPMAG00000006171-10092.925ENSCATG00000028334RAB2A10092.925Cercocebus_atys
ENSPMAG00000006171-10084.259ENSCATG00000044849RAB2B10084.259Cercocebus_atys
ENSPMAG00000006171-10084.259ENSCLAG00000002400RAB2B10084.259Chinchilla_lanigera
ENSPMAG00000006171-10093.396ENSCLAG00000005708RAB2A10093.396Chinchilla_lanigera
ENSPMAG00000006171-10092.925ENSCSAG00000014359RAB2A10092.925Chlorocebus_sabaeus
ENSPMAG00000006171-10084.259ENSCSAG00000016480RAB2B10084.259Chlorocebus_sabaeus
ENSPMAG00000006171-10080.660ENSCHOG00000000710RAB2B10080.660Choloepus_hoffmanni
ENSPMAG00000006171-10092.925ENSCPBG00000023254RAB2A10092.925Chrysemys_picta_bellii
ENSPMAG00000006171-10083.721ENSCPBG00000012691RAB2B10083.721Chrysemys_picta_bellii
ENSPMAG00000006171-8596.133ENSCING00000019877-9196.133Ciona_intestinalis
ENSPMAG00000006171-10090.141ENSCSAVG00000002088-10090.141Ciona_savignyi
ENSPMAG00000006171-10084.259ENSCANG00000029206RAB2B10084.259Colobus_angolensis_palliatus
ENSPMAG00000006171-10092.925ENSCGRG00001020076Rab2a10092.925Cricetulus_griseus_chok1gshd
ENSPMAG00000006171-10084.259ENSCGRG00001020833-10084.259Cricetulus_griseus_chok1gshd
ENSPMAG00000006171-10084.259ENSCGRG00000010264-10084.259Cricetulus_griseus_crigri
ENSPMAG00000006171-10092.453ENSCSEG00000017211rab2a10092.453Cynoglossus_semilaevis
ENSPMAG00000006171-10091.981ENSCVAG00000017623rab2a10091.981Cyprinodon_variegatus
ENSPMAG00000006171-10093.396ENSDARG00000020261rab2a10093.396Danio_rerio
ENSPMAG00000006171-10084.722ENSDORG00000012048Rab2b10084.722Dipodomys_ordii
ENSPMAG00000006171-10093.396ENSDORG00000025014Rab2a10093.396Dipodomys_ordii
ENSPMAG00000006171-10087.793FBgn0014009Rab210087.793Drosophila_melanogaster
ENSPMAG00000006171-10092.925ENSETEG00000010340RAB2A10092.925Echinops_telfairi
ENSPMAG00000006171-10076.852ENSEASG00005011485RAB2B10076.852Equus_asinus_asinus
ENSPMAG00000006171-10092.925ENSEASG00005016261RAB2A10092.925Equus_asinus_asinus
ENSPMAG00000006171-10092.925ENSECAG00000012124RAB2A10092.925Equus_caballus
ENSPMAG00000006171-10085.185ENSECAG00000006219RAB2B10085.185Equus_caballus
ENSPMAG00000006171-10092.925ENSELUG00000023964rab2a10092.925Esox_lucius
ENSPMAG00000006171-10092.925ENSFCAG00000024352RAB2A10092.925Felis_catus
ENSPMAG00000006171-10085.185ENSFCAG00000007745RAB2B10085.185Felis_catus
ENSPMAG00000006171-10092.925ENSFALG00000005613RAB2A10092.925Ficedula_albicollis
ENSPMAG00000006171-10084.722ENSFDAG00000017456RAB2B10084.722Fukomys_damarensis
ENSPMAG00000006171-10091.509ENSFHEG00000001296rab2a10091.509Fundulus_heteroclitus
ENSPMAG00000006171-10092.925ENSGALG00000015450RAB2A9896.939Gallus_gallus
ENSPMAG00000006171-10092.453ENSGAFG00000006846rab2a10092.453Gambusia_affinis
ENSPMAG00000006171-10086.916ENSGACG00000014905rab2a10086.916Gasterosteus_aculeatus
ENSPMAG00000006171-10084.186ENSGAGG00000023041RAB2B10084.186Gopherus_agassizii
ENSPMAG00000006171-10092.925ENSGAGG00000005606RAB2A10092.925Gopherus_agassizii
ENSPMAG00000006171-10084.259ENSGGOG00000014650RAB2B10084.259Gorilla_gorilla
ENSPMAG00000006171-10092.925ENSGGOG00000043049RAB2A10092.925Gorilla_gorilla
ENSPMAG00000006171-10091.038ENSHBUG00000019164rab2a10091.038Haplochromis_burtoni
ENSPMAG00000006171-10085.185ENSHGLG00000004071RAB2B10085.185Heterocephalus_glaber_female
ENSPMAG00000006171-10092.925ENSHGLG00000019399RAB2A10092.925Heterocephalus_glaber_female
ENSPMAG00000006171-10092.925ENSHGLG00100015803RAB2A10092.925Heterocephalus_glaber_male
ENSPMAG00000006171-10091.981ENSHCOG00000014428rab2a10091.981Hippocampus_comes
ENSPMAG00000006171-10092.925ENSIPUG00000007539rab2a10092.925Ictalurus_punctatus
ENSPMAG00000006171-10085.185ENSSTOG00000001886RAB2B10085.185Ictidomys_tridecemlineatus
ENSPMAG00000006171-10092.925ENSJJAG00000000676Rab2a10092.925Jaculus_jaculus
ENSPMAG00000006171-10091.981ENSKMAG00000009799rab2a10091.981Kryptolebias_marmoratus
ENSPMAG00000006171-10091.981ENSLBEG00000020796rab2a10091.981Labrus_bergylta
ENSPMAG00000006171-10092.453ENSLACG00000012521RAB2A10092.453Latimeria_chalumnae
ENSPMAG00000006171-7593.125ENSLACG00000014446RAB2B9793.125Latimeria_chalumnae
ENSPMAG00000006171-10092.925ENSLOCG00000005108rab2a10092.925Lepisosteus_oculatus
ENSPMAG00000006171-10093.396ENSLAFG00000015567RAB2A10093.396Loxodonta_africana
ENSPMAG00000006171-10084.259ENSMFAG00000027114RAB2B10084.259Macaca_fascicularis
ENSPMAG00000006171-10092.925ENSMFAG00000037805RAB2A10092.925Macaca_fascicularis
ENSPMAG00000006171-10092.925ENSMMUG00000017038RAB2A10092.925Macaca_mulatta
ENSPMAG00000006171-10084.259ENSMMUG00000014992RAB2B10084.259Macaca_mulatta
ENSPMAG00000006171-10092.925ENSMNEG00000037175RAB2A10092.925Macaca_nemestrina
ENSPMAG00000006171-10084.259ENSMNEG00000032275RAB2B10084.259Macaca_nemestrina
ENSPMAG00000006171-10084.259ENSMLEG00000043065RAB2B10084.259Mandrillus_leucophaeus
ENSPMAG00000006171-10091.981ENSMAMG00000011549rab2a10091.981Mastacembelus_armatus
ENSPMAG00000006171-10091.038ENSMZEG00005010611rab2a10091.038Maylandia_zebra
ENSPMAG00000006171-10092.925ENSMAUG00000017792Rab2a10092.925Mesocricetus_auratus
ENSPMAG00000006171-10092.925ENSMICG00000034540RAB2A10092.925Microcebus_murinus
ENSPMAG00000006171-10092.925ENSMOCG00000014140Rab2a10092.925Microtus_ochrogaster
ENSPMAG00000006171-10084.722ENSMOCG00000013161Rab2b10084.722Microtus_ochrogaster
ENSPMAG00000006171-10085.185ENSMODG00000006121RAB2B10085.185Monodelphis_domestica
ENSPMAG00000006171-10093.396ENSMODG00000008556RAB2A10093.396Monodelphis_domestica
ENSPMAG00000006171-10091.981ENSMALG00000004342rab2a10091.981Monopterus_albus
ENSPMAG00000006171-10084.722MGP_CAROLIEiJ_G0019238Rab2b10084.722Mus_caroli
ENSPMAG00000006171-10092.925MGP_CAROLIEiJ_G0025796Rab2a10092.925Mus_caroli
ENSPMAG00000006171-10084.722ENSMUSG00000022159Rab2b10084.722Mus_musculus
ENSPMAG00000006171-10092.925ENSMUSG00000047187Rab2a10092.925Mus_musculus
ENSPMAG00000006171-10092.925MGP_PahariEiJ_G0023919Rab2a10092.925Mus_pahari
ENSPMAG00000006171-10085.185MGP_PahariEiJ_G0030259Rab2b10085.185Mus_pahari
ENSPMAG00000006171-10084.722MGP_SPRETEiJ_G0020130Rab2b10084.722Mus_spretus
ENSPMAG00000006171-10092.925MGP_SPRETEiJ_G0026744Rab2a10092.925Mus_spretus
ENSPMAG00000006171-9984.722ENSMPUG00000000177RAB2B9884.722Mustela_putorius_furo
ENSPMAG00000006171-10082.870ENSMLUG00000001902RAB2B10082.870Myotis_lucifugus
ENSPMAG00000006171-10092.925ENSMLUG00000002855RAB2A10092.925Myotis_lucifugus
ENSPMAG00000006171-10085.185ENSNGAG00000017091Rab2b10085.185Nannospalax_galili
ENSPMAG00000006171-10092.925ENSNGAG00000020764Rab2a10092.925Nannospalax_galili
ENSPMAG00000006171-10091.509ENSNBRG00000001241rab2a10091.509Neolamprologus_brichardi
ENSPMAG00000006171-10092.925ENSNLEG00000036148RAB2A10092.925Nomascus_leucogenys
ENSPMAG00000006171-10084.259ENSNLEG00000014534RAB2B10084.259Nomascus_leucogenys
ENSPMAG00000006171-10085.648ENSMEUG00000010489RAB2B10085.648Notamacropus_eugenii
ENSPMAG00000006171-10083.721ENSOPRG00000016163RAB2B10083.721Ochotona_princeps
ENSPMAG00000006171-10092.925ENSODEG00000002369-10092.925Octodon_degus
ENSPMAG00000006171-9290.306ENSODEG00000016788-9990.306Octodon_degus
ENSPMAG00000006171-10084.259ENSODEG00000001343RAB2B10084.259Octodon_degus
ENSPMAG00000006171-10091.509ENSONIG00000016622rab2a10091.509Oreochromis_niloticus
ENSPMAG00000006171-10092.925ENSOANG00000005041RAB2A10092.925Ornithorhynchus_anatinus
ENSPMAG00000006171-10084.186ENSOCUG00000000331RAB2B10084.186Oryctolagus_cuniculus
ENSPMAG00000006171-10091.981ENSORLG00000013432rab2a10091.981Oryzias_latipes
ENSPMAG00000006171-10091.981ENSORLG00020020035rab2a10091.981Oryzias_latipes_hni
ENSPMAG00000006171-10091.981ENSORLG00015020900rab2a10091.981Oryzias_latipes_hsok
ENSPMAG00000006171-10091.981ENSOMEG00000016752rab2a10091.981Oryzias_melastigma
ENSPMAG00000006171-10084.259ENSOGAG00000002728-10084.259Otolemur_garnettii
ENSPMAG00000006171-9986.190ENSOARG00000019625RAB2B9586.190Ovis_aries
ENSPMAG00000006171-10084.259ENSPPAG00000035840RAB2B10084.259Pan_paniscus
ENSPMAG00000006171-10092.925ENSPPRG00000012945RAB2A10092.925Panthera_pardus
ENSPMAG00000006171-10085.185ENSPPRG00000005831RAB2B10085.185Panthera_pardus
ENSPMAG00000006171-10085.185ENSPTIG00000021935RAB2B10085.185Panthera_tigris_altaica
ENSPMAG00000006171-8591.713ENSPTRG00000006125-10091.713Pan_troglodytes
ENSPMAG00000006171-10092.925ENSPTRG00000020284RAB2A10092.925Pan_troglodytes
ENSPMAG00000006171-10092.925ENSPANG00000021867RAB2A10092.925Papio_anubis
ENSPMAG00000006171-10084.259ENSPANG00000021789RAB2B10084.259Papio_anubis
ENSPMAG00000006171-10092.453ENSPKIG00000005764RAB2A10092.453Paramormyrops_kingsleyae
ENSPMAG00000006171-10091.981ENSPKIG00000009739rab2a10091.981Paramormyrops_kingsleyae
ENSPMAG00000006171-10092.453ENSPSIG00000011994RAB2A10092.453Pelodiscus_sinensis
ENSPMAG00000006171-8689.848ENSPCIG00000000024-8589.848Phascolarctos_cinereus
ENSPMAG00000006171-10085.648ENSPCIG00000021943RAB2B10085.648Phascolarctos_cinereus
ENSPMAG00000006171-10091.981ENSPFOG00000004786rab2a10091.981Poecilia_formosa
ENSPMAG00000006171-10091.981ENSPLAG00000023374rab2a10091.981Poecilia_latipinna
ENSPMAG00000006171-10091.981ENSPREG00000014888rab2a10091.981Poecilia_reticulata
ENSPMAG00000006171-10092.925ENSPPYG00000018617RAB2A10092.925Pongo_abelii
ENSPMAG00000006171-10083.333ENSPPYG00000005597RAB2B10083.333Pongo_abelii
ENSPMAG00000006171-10092.925ENSPCOG00000020717RAB2A10092.925Propithecus_coquereli
ENSPMAG00000006171-10084.259ENSPVAG00000000273RAB2B10084.259Pteropus_vampyrus
ENSPMAG00000006171-10091.038ENSPNYG00000012426rab2a10091.038Pundamilia_nyererei
ENSPMAG00000006171-10092.453ENSPNAG00000011193rab2a10092.453Pygocentrus_nattereri
ENSPMAG00000006171-10084.186ENSRNOG00000012488Rab2b10084.186Rattus_norvegicus
ENSPMAG00000006171-9792.718ENSRNOG00000005963Rab2a10092.718Rattus_norvegicus
ENSPMAG00000006171-10084.259ENSRBIG00000027517RAB2B10084.259Rhinopithecus_bieti
ENSPMAG00000006171-9296.429ENSRBIG00000037603RAB2A10092.925Rhinopithecus_bieti
ENSPMAG00000006171-10084.259ENSRROG00000039326RAB2B10084.259Rhinopithecus_roxellana
ENSPMAG00000006171-10092.925ENSRROG00000031181RAB2A10092.925Rhinopithecus_roxellana
ENSPMAG00000006171-10068.056ENSSBOG00000034839RAB2B10068.056Saimiri_boliviensis_boliviensis
ENSPMAG00000006171-10092.925ENSSBOG00000025313RAB2A10092.925Saimiri_boliviensis_boliviensis
ENSPMAG00000006171-10082.547ENSSHAG00000013149-10082.547Sarcophilus_harrisii
ENSPMAG00000006171-10092.453ENSSFOG00015000865-10092.453Scleropages_formosus
ENSPMAG00000006171-10092.453ENSSFOG00015015034rab2a10092.453Scleropages_formosus
ENSPMAG00000006171-10091.981ENSSMAG00000001002rab2a10091.981Scophthalmus_maximus
ENSPMAG00000006171-10091.981ENSSDUG00000013724rab2a10091.981Seriola_dumerili
ENSPMAG00000006171-10091.981ENSSLDG00000022555rab2a10091.981Seriola_lalandi_dorsalis
ENSPMAG00000006171-10083.410ENSSPUG00000010112RAB2B10083.410Sphenodon_punctatus
ENSPMAG00000006171-10093.396ENSSSCG00000006232RAB2A10093.396Sus_scrofa
ENSPMAG00000006171-10085.185ENSSSCG00000029544RAB2B10085.185Sus_scrofa
ENSPMAG00000006171-10092.925ENSTGUG00000011182RAB2A10092.925Taeniopygia_guttata
ENSPMAG00000006171-10091.509ENSTRUG00000003363rab2a10091.509Takifugu_rubripes
ENSPMAG00000006171-10089.202ENSTNIG00000003472rab2a10089.202Tetraodon_nigroviridis
ENSPMAG00000006171-10085.185ENSUMAG00000004940RAB2B10085.185Ursus_maritimus
ENSPMAG00000006171-10082.243ENSVPAG00000007360RAB2B10082.243Vicugna_pacos
ENSPMAG00000006171-9590.547ENSVVUG00000011426-9690.547Vulpes_vulpes
ENSPMAG00000006171-10092.925ENSVVUG00000018053-10092.925Vulpes_vulpes
ENSPMAG00000006171-10083.256ENSXETG00000017184rab2b10083.256Xenopus_tropicalis
ENSPMAG00000006171-10091.509ENSXMAG00000024267rab2a10091.509Xiphophorus_maculatus

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