EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000006192 (Gene tree)
Gene ID: -
Gene Symbol: SCAF8
Alias: -
Full Name: SR-related CTD associated factor 8
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Plus strand
Length: 14045 bases
Position: chrGL481838:187798-201842
Accession: 20959
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000006861	RRM_1	PF00076.22	2.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000006891	SCAF8-201	2145	-	ENSPMAP00000006861	715 (aa)	-	S4RNS5

Gene Model

Click here to download ENSPMAG00000006192's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000006192's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000006192	SCAF8	64	53.901	ENSAPOG00000019615	scaf4b	52	59.712	Acanthochromis_polyacanthus
ENSPMAG00000006192	SCAF8	59	58.904	ENSAOCG00000010433	scaf4b	52	58.993	Amphiprion_ocellaris
ENSPMAG00000006192	SCAF8	64	56.000	ENSAPEG00000010913	scaf4b	57	52.465	Amphiprion_percula
ENSPMAG00000006192	SCAF8	81	45.289	ENSATEG00000011758	scaf4b	51	58.865	Anabas_testudineus
ENSPMAG00000006192	SCAF8	68	58.333	ENSACLG00000024833	scaf4b	55	58.273	Astatotilapia_calliptera
ENSPMAG00000006192	SCAF8	72	63.758	ENSCJAG00000008993	SCAF4	63	54.667	Callithrix_jacchus
ENSPMAG00000006192	SCAF8	57	63.758	ENSCAFG00020026019	SCAF4	63	52.083	Canis_lupus_dingo
ENSPMAG00000006192	SCAF8	59	55.957	ENSCSEG00000012808	-	52	54.676	Cynoglossus_semilaevis
ENSPMAG00000006192	SCAF8	60	58.170	ENSCVAG00000009142	scaf4b	52	58.993	Cyprinodon_variegatus
ENSPMAG00000006192	SCAF8	63	56.129	ENSFHEG00000007634	scaf4b	56	57.447	Fundulus_heteroclitus
ENSPMAG00000006192	SCAF8	74	50.562	ENSIPUG00000019311	-	57	59.420	Ictalurus_punctatus
ENSPMAG00000006192	SCAF8	68	58.000	ENSKMAG00000005742	scaf4b	52	57.447	Kryptolebias_marmoratus
ENSPMAG00000006192	SCAF8	60	58.333	ENSONIG00000005610	scaf4b	66	58.993	Oreochromis_niloticus
ENSPMAG00000006192	SCAF8	67	56.329	ENSORLG00000003420	scaf4b	58	57.857	Oryzias_latipes
ENSPMAG00000006192	SCAF8	67	55.696	ENSORLG00020013853	scaf4b	59	56.000	Oryzias_latipes_hni
ENSPMAG00000006192	SCAF8	72	52.364	ENSPLAG00000004403	-	51	56.552	Poecilia_latipinna
ENSPMAG00000006192	SCAF8	72	52.364	ENSPMEG00000006666	-	51	57.931	Poecilia_mexicana
ENSPMAG00000006192	SCAF8	72	53.818	ENSPREG00000013510	scaf4b	52	57.432	Poecilia_reticulata
ENSPMAG00000006192	SCAF8	68	58.333	ENSPNYG00000010526	scaf4b	55	58.273	Pundamilia_nyererei
ENSPMAG00000006192	SCAF8	71	58.084	ENSSMAG00000003738	scaf4b	59	57.554	Scophthalmus_maximus
ENSPMAG00000006192	SCAF8	67	58.156	ENSSDUG00000012380	scaf4b	55	58.156	Seriola_dumerili
ENSPMAG00000006192	SCAF8	67	58.156	ENSSLDG00000023152	-	55	58.156	Seriola_lalandi_dorsalis
ENSPMAG00000006192	SCAF8	70	50.357	ENSTRUG00000009536	-	55	57.554	Takifugu_rubripes