EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000006205 (Gene tree)
Gene ID: -
Gene Symbol: cpsf2
Alias: -
Full Name: cleavage and polyadenylation specific factor 2
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 20216 bases
Position: chrGL476370:652825-673040
Accession: ZDB-GENE-040718-79
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000006902	Beta-Casp	PF10996.8	2.3e-21	1	1
ENSPMAP00000006902	Lactamase_B	PF00753.27	3.1e-07	1	1
ENSPMAP00000006902	RMMBL	PF07521.12	9.5e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000006932	-	2530	-	ENSPMAP00000006902	789 (aa)	-	S4RNW6

Gene Model

Click here to download ENSPMAG00000006205's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000006205's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000006205	cpsf2	100	74.336	ENSG00000165934	CPSF2	100	80.000	Homo_sapiens
ENSPMAG00000006205	cpsf2	100	72.784	ENSAPOG00000001242	cpsf2	100	72.647	Acanthochromis_polyacanthus
ENSPMAG00000006205	cpsf2	100	73.810	ENSACIG00000009331	cpsf2	100	73.810	Amphilophus_citrinellus
ENSPMAG00000006205	cpsf2	100	73.034	ENSAOCG00000014095	cpsf2	100	72.773	Amphiprion_ocellaris
ENSPMAG00000006205	cpsf2	100	73.034	ENSAPEG00000009158	cpsf2	100	72.773	Amphiprion_percula
ENSPMAG00000006205	cpsf2	96	72.135	ENSATEG00000017644	cpsf2	99	68.812	Anabas_testudineus
ENSPMAG00000006205	cpsf2	100	73.897	ENSAPLG00000006330	CPSF2	100	73.897	Anas_platyrhynchos
ENSPMAG00000006205	cpsf2	100	74.116	ENSACAG00000009245	CPSF2	100	74.116	Anolis_carolinensis
ENSPMAG00000006205	cpsf2	100	74.336	ENSANAG00000022915	CPSF2	100	74.336	Aotus_nancymaae
ENSPMAG00000006205	cpsf2	100	73.492	ENSAMXG00000018696	cpsf2	100	73.492	Astyanax_mexicanus
ENSPMAG00000006205	cpsf2	100	74.336	ENSBTAG00000010227	CPSF2	100	74.336	Bos_taurus
ENSPMAG00000006205	cpsf2	100	42.640	WBGene00017313	cpsf-2	100	43.042	Caenorhabditis_elegans
ENSPMAG00000006205	cpsf2	100	74.336	ENSCJAG00000018069	CPSF2	100	74.336	Callithrix_jacchus
ENSPMAG00000006205	cpsf2	100	74.336	ENSCAFG00000010909	CPSF2	100	74.336	Canis_familiaris
ENSPMAG00000006205	cpsf2	100	74.336	ENSCAFG00020020670	CPSF2	100	74.336	Canis_lupus_dingo
ENSPMAG00000006205	cpsf2	100	74.336	ENSCHIG00000023848	CPSF2	100	74.336	Capra_hircus
ENSPMAG00000006205	cpsf2	100	74.083	ENSTSYG00000009036	CPSF2	100	74.083	Carlito_syrichta
ENSPMAG00000006205	cpsf2	100	74.336	ENSCPOG00000010899	CPSF2	100	74.336	Cavia_porcellus
ENSPMAG00000006205	cpsf2	100	74.336	ENSCCAG00000028088	CPSF2	100	74.336	Cebus_capucinus
ENSPMAG00000006205	cpsf2	100	74.336	ENSCATG00000030132	CPSF2	100	74.336	Cercocebus_atys
ENSPMAG00000006205	cpsf2	100	74.336	ENSCLAG00000012404	CPSF2	100	74.336	Chinchilla_lanigera
ENSPMAG00000006205	cpsf2	100	74.336	ENSCSAG00000011300	CPSF2	100	74.336	Chlorocebus_sabaeus
ENSPMAG00000006205	cpsf2	94	82.500	ENSCHOG00000012904	CPSF2	100	71.176	Choloepus_hoffmanni
ENSPMAG00000006205	cpsf2	100	73.737	ENSCPBG00000008766	CPSF2	97	73.737	Chrysemys_picta_bellii
ENSPMAG00000006205	cpsf2	100	53.884	ENSCING00000007881	-	100	53.514	Ciona_intestinalis
ENSPMAG00000006205	cpsf2	94	74.259	ENSCANG00000041651	CPSF2	100	74.224	Colobus_angolensis_palliatus
ENSPMAG00000006205	cpsf2	100	74.336	ENSCGRG00001006901	Cpsf2	100	74.336	Cricetulus_griseus_chok1gshd
ENSPMAG00000006205	cpsf2	100	74.336	ENSCGRG00000012416	Cpsf2	100	74.336	Cricetulus_griseus_crigri
ENSPMAG00000006205	cpsf2	100	73.034	ENSCSEG00000004116	cpsf2	100	72.682	Cynoglossus_semilaevis
ENSPMAG00000006205	cpsf2	100	71.941	ENSCVAG00000000095	cpsf2	100	72.773	Cyprinodon_variegatus
ENSPMAG00000006205	cpsf2	100	73.091	ENSDARG00000028971	cpsf2	100	73.183	Danio_rerio
ENSPMAG00000006205	cpsf2	100	74.336	ENSDNOG00000042757	CPSF2	100	74.336	Dasypus_novemcinctus
ENSPMAG00000006205	cpsf2	100	74.336	ENSDORG00000013709	Cpsf2	100	74.336	Dipodomys_ordii
ENSPMAG00000006205	cpsf2	100	51.605	FBgn0027873	Cpsf100	100	50.980	Drosophila_melanogaster
ENSPMAG00000006205	cpsf2	100	69.318	ENSETEG00000012123	CPSF2	100	69.318	Echinops_telfairi
ENSPMAG00000006205	cpsf2	51	79.557	ENSEBUG00000012098	cpsf2	93	79.557	Eptatretus_burgeri
ENSPMAG00000006205	cpsf2	89	86.348	ENSEASG00005021193	CPSF2	100	86.348	Equus_asinus_asinus
ENSPMAG00000006205	cpsf2	100	74.336	ENSECAG00000023935	CPSF2	100	74.336	Equus_caballus
ENSPMAG00000006205	cpsf2	100	72.773	ENSELUG00000008442	cpsf2	100	71.960	Esox_lucius
ENSPMAG00000006205	cpsf2	100	74.336	ENSFCAG00000007886	CPSF2	100	74.336	Felis_catus
ENSPMAG00000006205	cpsf2	100	74.210	ENSFALG00000002412	CPSF2	100	74.210	Ficedula_albicollis
ENSPMAG00000006205	cpsf2	100	74.210	ENSFDAG00000006327	CPSF2	100	74.210	Fukomys_damarensis
ENSPMAG00000006205	cpsf2	96	72.021	ENSFHEG00000015465	cpsf2	98	72.021	Fundulus_heteroclitus
ENSPMAG00000006205	cpsf2	100	73.000	ENSGMOG00000008761	cpsf2	100	72.875	Gadus_morhua
ENSPMAG00000006205	cpsf2	100	74.083	ENSGALG00000010783	CPSF2	100	74.083	Gallus_gallus
ENSPMAG00000006205	cpsf2	100	72.784	ENSGAFG00000001407	cpsf2	100	72.522	Gambusia_affinis
ENSPMAG00000006205	cpsf2	100	73.283	ENSGACG00000008418	cpsf2	100	73.149	Gasterosteus_aculeatus
ENSPMAG00000006205	cpsf2	100	73.611	ENSGAGG00000008287	CPSF2	100	73.611	Gopherus_agassizii
ENSPMAG00000006205	cpsf2	100	74.336	ENSGGOG00000011799	CPSF2	100	74.336	Gorilla_gorilla
ENSPMAG00000006205	cpsf2	100	72.682	ENSHBUG00000023466	cpsf2	100	72.898	Haplochromis_burtoni
ENSPMAG00000006205	cpsf2	100	74.210	ENSHGLG00000018311	CPSF2	100	74.210	Heterocephalus_glaber_female
ENSPMAG00000006205	cpsf2	100	74.210	ENSHGLG00100016460	CPSF2	100	74.210	Heterocephalus_glaber_male
ENSPMAG00000006205	cpsf2	100	73.149	ENSHCOG00000019527	cpsf2	98	72.898	Hippocampus_comes
ENSPMAG00000006205	cpsf2	100	74.497	ENSIPUG00000020857	cpsf2	100	74.497	Ictalurus_punctatus
ENSPMAG00000006205	cpsf2	100	74.336	ENSSTOG00000009528	CPSF2	100	74.336	Ictidomys_tridecemlineatus
ENSPMAG00000006205	cpsf2	100	74.336	ENSJJAG00000017925	Cpsf2	100	74.336	Jaculus_jaculus
ENSPMAG00000006205	cpsf2	100	72.784	ENSKMAG00000019429	cpsf2	100	72.522	Kryptolebias_marmoratus
ENSPMAG00000006205	cpsf2	95	72.053	ENSLBEG00000011585	cpsf2	99	72.053	Labrus_bergylta
ENSPMAG00000006205	cpsf2	100	74.842	ENSLACG00000019024	CPSF2	100	74.842	Latimeria_chalumnae
ENSPMAG00000006205	cpsf2	100	73.935	ENSLOCG00000014102	cpsf2	100	73.935	Lepisosteus_oculatus
ENSPMAG00000006205	cpsf2	100	74.149	ENSLAFG00000004891	CPSF2	100	74.149	Loxodonta_africana
ENSPMAG00000006205	cpsf2	100	74.336	ENSMFAG00000041212	CPSF2	100	74.336	Macaca_fascicularis
ENSPMAG00000006205	cpsf2	100	74.336	ENSMMUG00000000699	CPSF2	100	74.336	Macaca_mulatta
ENSPMAG00000006205	cpsf2	100	74.336	ENSMNEG00000031584	CPSF2	100	74.336	Macaca_nemestrina
ENSPMAG00000006205	cpsf2	100	74.336	ENSMLEG00000029394	CPSF2	100	74.336	Mandrillus_leucophaeus
ENSPMAG00000006205	cpsf2	100	73.159	ENSMAMG00000004235	cpsf2	100	72.898	Mastacembelus_armatus
ENSPMAG00000006205	cpsf2	100	72.773	ENSMZEG00005001769	cpsf2	100	72.773	Maylandia_zebra
ENSPMAG00000006205	cpsf2	100	73.864	ENSMGAG00000013122	CPSF2	100	73.864	Meleagris_gallopavo
ENSPMAG00000006205	cpsf2	100	74.336	ENSMAUG00000015160	Cpsf2	100	74.336	Mesocricetus_auratus
ENSPMAG00000006205	cpsf2	100	74.336	ENSMICG00000016441	CPSF2	100	74.336	Microcebus_murinus
ENSPMAG00000006205	cpsf2	100	74.336	ENSMOCG00000015372	Cpsf2	100	74.336	Microtus_ochrogaster
ENSPMAG00000006205	cpsf2	100	68.539	ENSMMOG00000015590	cpsf2	100	68.256	Mola_mola
ENSPMAG00000006205	cpsf2	100	74.083	ENSMODG00000002042	CPSF2	100	74.083	Monodelphis_domestica
ENSPMAG00000006205	cpsf2	100	71.660	ENSMALG00000022275	cpsf2	100	71.267	Monopterus_albus
ENSPMAG00000006205	cpsf2	100	74.336	ENSMUSG00000041781	Cpsf2	100	74.336	Mus_musculus
ENSPMAG00000006205	cpsf2	100	74.336	MGP_PahariEiJ_G0029791	Cpsf2	100	74.336	Mus_pahari
ENSPMAG00000006205	cpsf2	100	74.336	MGP_SPRETEiJ_G0018877	Cpsf2	100	74.336	Mus_spretus
ENSPMAG00000006205	cpsf2	100	74.463	ENSMPUG00000007617	CPSF2	98	74.463	Mustela_putorius_furo
ENSPMAG00000006205	cpsf2	100	74.210	ENSMLUG00000005570	CPSF2	100	74.210	Myotis_lucifugus
ENSPMAG00000006205	cpsf2	100	74.589	ENSNGAG00000020312	Cpsf2	100	74.589	Nannospalax_galili
ENSPMAG00000006205	cpsf2	100	72.898	ENSNBRG00000022402	cpsf2	100	72.773	Neolamprologus_brichardi
ENSPMAG00000006205	cpsf2	100	73.451	ENSNLEG00000017132	CPSF2	100	73.451	Nomascus_leucogenys
ENSPMAG00000006205	cpsf2	91	88.997	ENSMEUG00000008138	CPSF2	91	88.997	Notamacropus_eugenii
ENSPMAG00000006205	cpsf2	85	84.722	ENSOPRG00000008484	-	92	84.722	Ochotona_princeps
ENSPMAG00000006205	cpsf2	100	74.210	ENSODEG00000008682	CPSF2	100	74.210	Octodon_degus
ENSPMAG00000006205	cpsf2	100	73.149	ENSONIG00000005901	cpsf2	100	72.773	Oreochromis_niloticus
ENSPMAG00000006205	cpsf2	100	74.336	ENSOANG00000003822	CPSF2	100	74.336	Ornithorhynchus_anatinus
ENSPMAG00000006205	cpsf2	100	74.336	ENSOCUG00000005713	CPSF2	100	74.336	Oryctolagus_cuniculus
ENSPMAG00000006205	cpsf2	100	68.414	ENSORLG00000011628	cpsf2	100	68.005	Oryzias_latipes
ENSPMAG00000006205	cpsf2	100	73.034	ENSORLG00020016980	cpsf2	100	72.647	Oryzias_latipes_hni
ENSPMAG00000006205	cpsf2	100	73.034	ENSORLG00015011910	cpsf2	100	72.647	Oryzias_latipes_hsok
ENSPMAG00000006205	cpsf2	100	73.159	ENSOMEG00000022876	cpsf2	100	72.556	Oryzias_melastigma
ENSPMAG00000006205	cpsf2	100	71.375	ENSOARG00000012889	CPSF2	100	71.375	Ovis_aries
ENSPMAG00000006205	cpsf2	100	74.336	ENSPPAG00000039666	CPSF2	100	74.336	Pan_paniscus
ENSPMAG00000006205	cpsf2	99	74.304	ENSPPRG00000010869	CPSF2	100	74.304	Panthera_pardus
ENSPMAG00000006205	cpsf2	100	74.336	ENSPTIG00000021202	CPSF2	100	74.336	Panthera_tigris_altaica
ENSPMAG00000006205	cpsf2	100	74.336	ENSPTRG00000006651	CPSF2	100	74.336	Pan_troglodytes
ENSPMAG00000006205	cpsf2	100	74.336	ENSPANG00000017417	CPSF2	100	74.336	Papio_anubis
ENSPMAG00000006205	cpsf2	100	69.686	ENSPKIG00000021453	cpsf2	100	69.095	Paramormyrops_kingsleyae
ENSPMAG00000006205	cpsf2	100	73.485	ENSPSIG00000006289	CPSF2	100	73.485	Pelodiscus_sinensis
ENSPMAG00000006205	cpsf2	76	68.439	ENSPMGG00000002511	cpsf2	99	68.033	Periophthalmus_magnuspinnatus
ENSPMAG00000006205	cpsf2	100	74.463	ENSPEMG00000007917	Cpsf2	100	74.463	Peromyscus_maniculatus_bairdii
ENSPMAG00000006205	cpsf2	100	74.083	ENSPCIG00000011393	CPSF2	94	84.504	Phascolarctos_cinereus
ENSPMAG00000006205	cpsf2	100	72.909	ENSPFOG00000018648	cpsf2	100	72.647	Poecilia_formosa
ENSPMAG00000006205	cpsf2	100	72.909	ENSPLAG00000019199	cpsf2	99	72.647	Poecilia_latipinna
ENSPMAG00000006205	cpsf2	96	72.539	ENSPMEG00000012100	cpsf2	99	72.266	Poecilia_mexicana
ENSPMAG00000006205	cpsf2	100	72.659	ENSPREG00000008960	cpsf2	100	72.271	Poecilia_reticulata
ENSPMAG00000006205	cpsf2	64	66.337	ENSPPYG00000029685	-	100	66.337	Pongo_abelii
ENSPMAG00000006205	cpsf2	100	74.463	ENSPCAG00000012477	CPSF2	100	74.463	Procavia_capensis
ENSPMAG00000006205	cpsf2	100	74.336	ENSPCOG00000026387	CPSF2	100	74.336	Propithecus_coquereli
ENSPMAG00000006205	cpsf2	64	85.714	ENSPVAG00000004223	CPSF2	65	85.714	Pteropus_vampyrus
ENSPMAG00000006205	cpsf2	100	72.807	ENSPNYG00000023356	cpsf2	100	72.807	Pundamilia_nyererei
ENSPMAG00000006205	cpsf2	100	73.744	ENSPNAG00000001849	cpsf2	100	73.744	Pygocentrus_nattereri
ENSPMAG00000006205	cpsf2	100	74.210	ENSRNOG00000005733	Cpsf2	100	74.210	Rattus_norvegicus
ENSPMAG00000006205	cpsf2	100	74.336	ENSRBIG00000044792	CPSF2	100	74.336	Rhinopithecus_bieti
ENSPMAG00000006205	cpsf2	100	74.336	ENSRROG00000034875	CPSF2	100	74.336	Rhinopithecus_roxellana
ENSPMAG00000006205	cpsf2	100	74.336	ENSSBOG00000024571	CPSF2	100	74.336	Saimiri_boliviensis_boliviensis
ENSPMAG00000006205	cpsf2	100	74.210	ENSSHAG00000010458	CPSF2	100	74.210	Sarcophilus_harrisii
ENSPMAG00000006205	cpsf2	100	74.372	ENSSFOG00015002117	cpsf2	100	74.372	Scleropages_formosus
ENSPMAG00000006205	cpsf2	100	72.534	ENSSMAG00000002001	cpsf2	100	72.180	Scophthalmus_maximus
ENSPMAG00000006205	cpsf2	100	73.275	ENSSDUG00000004084	cpsf2	100	73.275	Seriola_dumerili
ENSPMAG00000006205	cpsf2	100	72.431	ENSSLDG00000024330	cpsf2	100	72.898	Seriola_lalandi_dorsalis
ENSPMAG00000006205	cpsf2	57	91.089	ENSSARG00000009784	-	63	91.089	Sorex_araneus
ENSPMAG00000006205	cpsf2	100	73.831	ENSSPUG00000013485	CPSF2	100	73.831	Sphenodon_punctatus
ENSPMAG00000006205	cpsf2	100	73.159	ENSSPAG00000013284	cpsf2	100	73.024	Stegastes_partitus
ENSPMAG00000006205	cpsf2	100	74.336	ENSSSCG00000002447	CPSF2	100	74.336	Sus_scrofa
ENSPMAG00000006205	cpsf2	100	74.083	ENSTGUG00000012571	-	100	74.083	Taeniopygia_guttata
ENSPMAG00000006205	cpsf2	100	72.444	ENSTRUG00000003742	cpsf2	100	72.647	Takifugu_rubripes
ENSPMAG00000006205	cpsf2	100	72.015	ENSTNIG00000012228	cpsf2	100	72.716	Tetraodon_nigroviridis
ENSPMAG00000006205	cpsf2	88	80.000	ENSTBEG00000004530	CPSF2	91	80.000	Tupaia_belangeri
ENSPMAG00000006205	cpsf2	88	77.083	ENSTTRG00000008697	CPSF2	88	77.083	Tursiops_truncatus
ENSPMAG00000006205	cpsf2	100	74.336	ENSUAMG00000028071	CPSF2	100	74.336	Ursus_americanus
ENSPMAG00000006205	cpsf2	92	84.211	ENSUMAG00000005029	CPSF2	100	84.988	Ursus_maritimus
ENSPMAG00000006205	cpsf2	99	74.177	ENSVPAG00000003503	CPSF2	100	74.177	Vicugna_pacos
ENSPMAG00000006205	cpsf2	100	74.336	ENSVVUG00000024642	CPSF2	100	74.336	Vulpes_vulpes
ENSPMAG00000006205	cpsf2	100	73.864	ENSXETG00000010289	cpsf2	100	73.864	Xenopus_tropicalis
ENSPMAG00000006205	cpsf2	100	72.784	ENSXCOG00000001764	cpsf2	100	72.522	Xiphophorus_couchianus
ENSPMAG00000006205	cpsf2	100	73.034	ENSXMAG00000017048	cpsf2	100	72.647	Xiphophorus_maculatus