EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMAG00000006346 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Plus strand
Length: 990 bases
Position: chrGL477854:1437-2426
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000006986	PARP	PF00644.20	1.1e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000007017	-	606	-	ENSPMAP00000006986	202 (aa)	-	S4RP50

Gene Model

Click here to download ENSPMAG00000006346's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000006346's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMAG00000006346	-	99	41.872	ENSPMAG00000001724	-	82	41.872
ENSPMAG00000006346	-	99	38.049	ENSPMAG00000002134	-	84	37.561

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000006346	-	100	49.505	ENSG00000059378	PARP12	88	62.687	Homo_sapiens
ENSPMAG00000006346	-	99	46.766	ENSEBUG00000003295	-	64	46.766	Eptatretus_burgeri
ENSPMAG00000006346	-	99	48.259	ENSGMOG00000001046	-	80	47.761	Gadus_morhua
ENSPMAG00000006346	-	99	48.756	ENSGMOG00000005375	-	86	48.259	Gadus_morhua
ENSPMAG00000006346	-	99	46.269	ENSGMOG00000005410	-	93	45.771	Gadus_morhua
ENSPMAG00000006346	-	99	48.241	ENSGMOG00000005403	-	95	47.739	Gadus_morhua
ENSPMAG00000006346	-	100	50.990	ENSLOCG00000016971	-	72	48.515	Lepisosteus_oculatus
ENSPMAG00000006346	-	100	44.554	ENSMZEG00005018262	-	57	44.059	Maylandia_zebra