EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000006513 (Gene tree)
Gene ID: -
Gene Symbol: rrs1
Alias: -
Full Name: RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 15992 bases
Position: chrGL478722:39803-55794
Accession: ZDB-GENE-030131-9345
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000007199	RRS1	PF04939.12	3.8e-60	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000007231	-	1134	-	ENSPMAP00000007199	377 (aa)	-	S4RPR3

Gene Model

Click here to download ENSPMAG00000006513's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000006513's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000006513	rrs1	81	59.486	ENSG00000179041	RRS1	82	59.801	Homo_sapiens
ENSPMAG00000006513	rrs1	94	56.497	ENSATEG00000011743	rrs1	85	60.606	Anabas_testudineus
ENSPMAG00000006513	rrs1	85	59.443	ENSANAG00000018116	RRS1	83	59.603	Aotus_nancymaae
ENSPMAG00000006513	rrs1	84	59.306	ENSAMXG00000037893	rrs1	80	59.740	Astyanax_mexicanus
ENSPMAG00000006513	rrs1	85	59.259	ENSBTAG00000016716	RRS1	82	60.535	Bos_taurus
ENSPMAG00000006513	rrs1	68	44.318	WBGene00007617	rrbs-1	78	44.318	Caenorhabditis_elegans
ENSPMAG00000006513	rrs1	85	58.824	ENSCJAG00000022034	RRS1	82	59.866	Callithrix_jacchus
ENSPMAG00000006513	rrs1	81	60.129	ENSCAFG00000007313	RRS1	82	61.130	Canis_familiaris
ENSPMAG00000006513	rrs1	81	60.129	ENSCAFG00020016049	-	82	61.130	Canis_lupus_dingo
ENSPMAG00000006513	rrs1	81	60.129	ENSCAFG00020020365	-	82	61.130	Canis_lupus_dingo
ENSPMAG00000006513	rrs1	81	59.105	ENSCHIG00000009141	RRS1	82	59.866	Capra_hircus
ENSPMAG00000006513	rrs1	85	58.333	ENSCPOG00000000647	RRS1	84	60.133	Cavia_porcellus
ENSPMAG00000006513	rrs1	85	58.824	ENSCCAG00000032186	RRS1	82	59.468	Cebus_capucinus
ENSPMAG00000006513	rrs1	81	59.807	ENSCATG00000016944	RRS1	82	60.133	Cercocebus_atys
ENSPMAG00000006513	rrs1	89	57.558	ENSCSAG00000018552	RRS1	82	59.801	Chlorocebus_sabaeus
ENSPMAG00000006513	rrs1	81	59.744	ENSCHOG00000002455	RRS1	82	60.465	Choloepus_hoffmanni
ENSPMAG00000006513	rrs1	81	51.582	ENSCPBG00000021374	RRS1	87	52.273	Chrysemys_picta_bellii
ENSPMAG00000006513	rrs1	78	53.559	ENSCING00000002177	-	91	53.559	Ciona_intestinalis
ENSPMAG00000006513	rrs1	77	50.512	ENSCSAVG00000011819	-	90	50.512	Ciona_savignyi
ENSPMAG00000006513	rrs1	85	59.443	ENSCANG00000012718	RRS1	82	60.133	Colobus_angolensis_palliatus
ENSPMAG00000006513	rrs1	97	55.556	ENSCGRG00001002391	-	82	60.067	Cricetulus_griseus_chok1gshd
ENSPMAG00000006513	rrs1	85	58.025	ENSCGRG00001015575	-	86	59.396	Cricetulus_griseus_chok1gshd
ENSPMAG00000006513	rrs1	78	50.338	ENSCSEG00000014750	rrs1	81	50.338	Cynoglossus_semilaevis
ENSPMAG00000006513	rrs1	79	49.000	ENSCVAG00000017878	rrs1	85	49.000	Cyprinodon_variegatus
ENSPMAG00000006513	rrs1	79	61.279	ENSDARG00000003941	rrs1	86	61.279	Danio_rerio
ENSPMAG00000006513	rrs1	81	58.333	ENSDNOG00000017900	RRS1	81	58.746	Dasypus_novemcinctus
ENSPMAG00000006513	rrs1	57	58.904	ENSDORG00000026331	Rrs1	78	60.386	Dipodomys_ordii
ENSPMAG00000006513	rrs1	91	45.352	FBgn0052409	CG32409	84	46.622	Drosophila_melanogaster
ENSPMAG00000006513	rrs1	51	59.184	ENSETEG00000000935	-	53	59.184	Echinops_telfairi
ENSPMAG00000006513	rrs1	92	55.307	ENSEBUG00000013506	rrs1	96	59.298	Eptatretus_burgeri
ENSPMAG00000006513	rrs1	81	59.744	ENSEASG00005001691	RRS1	82	60.465	Equus_asinus_asinus
ENSPMAG00000006513	rrs1	86	58.434	ENSECAG00000004492	RRS1	89	60.396	Equus_caballus
ENSPMAG00000006513	rrs1	81	59.744	ENSEEUG00000013719	RRS1	82	60.465	Erinaceus_europaeus
ENSPMAG00000006513	rrs1	81	59.355	ENSFCAG00000014332	RRS1	82	60.333	Felis_catus
ENSPMAG00000006513	rrs1	77	52.769	ENSGALG00000030890	RRS1	86	53.185	Gallus_gallus
ENSPMAG00000006513	rrs1	79	58.389	ENSGACG00000002969	rrs1	84	58.389	Gasterosteus_aculeatus
ENSPMAG00000006513	rrs1	81	51.899	ENSGAGG00000023718	RRS1	85	52.273	Gopherus_agassizii
ENSPMAG00000006513	rrs1	81	60.000	ENSGGOG00000026663	RRS1	82	60.726	Gorilla_gorilla
ENSPMAG00000006513	rrs1	85	60.681	ENSHGLG00000021423	RRS1	82	61.000	Heterocephalus_glaber_female
ENSPMAG00000006513	rrs1	85	60.681	ENSHGLG00100020640	RRS1	82	61.000	Heterocephalus_glaber_male
ENSPMAG00000006513	rrs1	94	56.056	ENSHCOG00000015358	rrs1	84	60.261	Hippocampus_comes
ENSPMAG00000006513	rrs1	79	61.538	ENSIPUG00000014412	rrs1	86	61.000	Ictalurus_punctatus
ENSPMAG00000006513	rrs1	91	55.833	ENSSTOG00000026310	RRS1	82	60.870	Ictidomys_tridecemlineatus
ENSPMAG00000006513	rrs1	80	60.328	ENSJJAG00000011507	-	82	60.396	Jaculus_jaculus
ENSPMAG00000006513	rrs1	73	53.986	ENSJJAG00000020395	-	80	53.986	Jaculus_jaculus
ENSPMAG00000006513	rrs1	79	58.586	ENSKMAG00000008238	rrs1	88	58.586	Kryptolebias_marmoratus
ENSPMAG00000006513	rrs1	81	63.192	ENSLACG00000004058	RRS1	90	64.646	Latimeria_chalumnae
ENSPMAG00000006513	rrs1	82	62.136	ENSLOCG00000017812	rrs1	88	63.000	Lepisosteus_oculatus
ENSPMAG00000006513	rrs1	83	59.006	ENSLAFG00000015405	RRS1	83	59.486	Loxodonta_africana
ENSPMAG00000006513	rrs1	97	55.256	ENSMFAG00000042747	RRS1	82	60.133	Macaca_fascicularis
ENSPMAG00000006513	rrs1	97	55.256	ENSMMUG00000000886	RRS1	82	60.133	Macaca_mulatta
ENSPMAG00000006513	rrs1	97	55.256	ENSMNEG00000011696	RRS1	82	60.133	Macaca_nemestrina
ENSPMAG00000006513	rrs1	81	59.807	ENSMLEG00000004794	RRS1	82	60.133	Mandrillus_leucophaeus
ENSPMAG00000006513	rrs1	78	60.339	ENSMZEG00005004349	RRS1	83	60.535	Maylandia_zebra
ENSPMAG00000006513	rrs1	97	55.256	ENSMAUG00000005392	Rrs1	82	60.133	Mesocricetus_auratus
ENSPMAG00000006513	rrs1	88	57.396	ENSMOCG00000015862	Rrs1	78	59.801	Microtus_ochrogaster
ENSPMAG00000006513	rrs1	85	59.816	ENSMODG00000024952	RRS1	83	62.171	Monodelphis_domestica
ENSPMAG00000006513	rrs1	97	55.405	MGP_CAROLIEiJ_G0013936	Rrs1	82	60.067	Mus_caroli
ENSPMAG00000006513	rrs1	97	54.865	ENSMUSG00000061024	Rrs1	82	60.067	Mus_musculus
ENSPMAG00000006513	rrs1	97	54.743	MGP_PahariEiJ_G0023883	Rrs1	82	59.060	Mus_pahari
ENSPMAG00000006513	rrs1	97	55.135	MGP_SPRETEiJ_G0014739	Rrs1	82	60.067	Mus_spretus
ENSPMAG00000006513	rrs1	97	56.150	ENSMPUG00000018626	RRS1	81	60.797	Mustela_putorius_furo
ENSPMAG00000006513	rrs1	85	58.824	ENSNGAG00000012904	Rrs1	82	60.201	Nannospalax_galili
ENSPMAG00000006513	rrs1	62	60.338	ENSNLEG00000027730	RRS1	76	59.914	Nomascus_leucogenys
ENSPMAG00000006513	rrs1	78	61.017	ENSONIG00000014187	rrs1	86	60.943	Oreochromis_niloticus
ENSPMAG00000006513	rrs1	87	56.587	ENSOANG00000012348	RRS1	88	55.988	Ornithorhynchus_anatinus
ENSPMAG00000006513	rrs1	81	59.355	ENSOCUG00000013490	RRS1	82	59.868	Oryctolagus_cuniculus
ENSPMAG00000006513	rrs1	82	49.045	ENSOMEG00000008525	rrs1	84	49.498	Oryzias_melastigma
ENSPMAG00000006513	rrs1	85	60.372	ENSOGAG00000001085	RRS1	82	61.204	Otolemur_garnettii
ENSPMAG00000006513	rrs1	83	54.717	ENSOARG00000017417	RRS1	82	55.556	Ovis_aries
ENSPMAG00000006513	rrs1	81	59.365	ENSPPAG00000024378	RRS1	82	60.066	Pan_paniscus
ENSPMAG00000006513	rrs1	79	60.927	ENSPPRG00000021408	RRS1	82	61.000	Panthera_pardus
ENSPMAG00000006513	rrs1	81	59.048	ENSPTRG00000030988	RRS1	82	59.736	Pan_troglodytes
ENSPMAG00000006513	rrs1	89	44.571	ENSPANG00000035974	RRS1	78	46.801	Papio_anubis
ENSPMAG00000006513	rrs1	79	61.204	ENSPKIG00000007953	rrs1	87	61.204	Paramormyrops_kingsleyae
ENSPMAG00000006513	rrs1	97	54.960	ENSPEMG00000014427	Rrs1	82	60.133	Peromyscus_maniculatus_bairdii
ENSPMAG00000006513	rrs1	79	60.133	ENSPCIG00000026695	RRS1	84	60.133	Phascolarctos_cinereus
ENSPMAG00000006513	rrs1	78	62.373	ENSPFOG00000020722	rrs1	93	62.000	Poecilia_formosa
ENSPMAG00000006513	rrs1	79	52.318	ENSPREG00000019960	rrs1	83	52.318	Poecilia_reticulata
ENSPMAG00000006513	rrs1	77	61.168	ENSPPYG00000018637	RRS1	98	61.168	Pongo_abelii
ENSPMAG00000006513	rrs1	85	59.133	ENSPCAG00000009115	RRS1	82	59.468	Procavia_capensis
ENSPMAG00000006513	rrs1	97	54.447	ENSRNOG00000007240	Rrs1	82	59.532	Rattus_norvegicus
ENSPMAG00000006513	rrs1	81	59.807	ENSRBIG00000009132	RRS1	82	60.133	Rhinopithecus_bieti
ENSPMAG00000006513	rrs1	81	59.807	ENSRROG00000013472	RRS1	82	60.133	Rhinopithecus_roxellana
ENSPMAG00000006513	rrs1	79	59.866	ENSSBOG00000012639	-	84	59.866	Saimiri_boliviensis_boliviensis
ENSPMAG00000006513	rrs1	79	59.801	ENSSBOG00000011006	-	84	59.866	Saimiri_boliviensis_boliviensis
ENSPMAG00000006513	rrs1	79	49.329	ENSSFOG00015015772	rrs1	83	49.329	Scleropages_formosus
ENSPMAG00000006513	rrs1	88	56.233	ENSSMAG00000015226	rrs1	81	61.953	Scophthalmus_maximus
ENSPMAG00000006513	rrs1	64	59.322	ENSSARG00000006976	RRS1	64	59.322	Sorex_araneus
ENSPMAG00000006513	rrs1	97	55.795	ENSSSCG00000006214	RRS1	82	60.465	Sus_scrofa
ENSPMAG00000006513	rrs1	82	60.129	ENSTRUG00000008796	rrs1	98	58.075	Takifugu_rubripes
ENSPMAG00000006513	rrs1	72	63.139	ENSTNIG00000004026	rrs1	88	62.290	Tetraodon_nigroviridis
ENSPMAG00000006513	rrs1	81	60.450	ENSTBEG00000014752	RRS1	82	61.204	Tupaia_belangeri
ENSPMAG00000006513	rrs1	97	56.300	ENSUAMG00000008502	RRS1	82	60.797	Ursus_americanus
ENSPMAG00000006513	rrs1	81	60.129	ENSVVUG00000018452	RRS1	82	61.130	Vulpes_vulpes
ENSPMAG00000006513	rrs1	78	63.300	ENSXCOG00000009809	rrs1	85	62.914	Xiphophorus_couchianus