EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMAG00000006518 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Plus strand
Length: 948 bases
Position: chrGL497490:2135-3082
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000007184	RRM_1	PF00076.22	9.7e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000007216	-	702	-	ENSPMAP00000007184	234 (aa)	-	S4RPP8

Gene Model

Click here to download ENSPMAG00000006518's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000006518's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMAG00000006518	-	58	51.471	ENSPMAG00000007450	ncbp2	73	54.918

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000006518	-	53	48.780	ENSG00000170935	NCBP2L	88	46.324	Homo_sapiens
ENSPMAG00000006518	-	56	43.511	ENSAMEG00000018655	NCBP2L	85	43.511	Ailuropoda_melanoleuca
ENSPMAG00000006518	-	50	57.265	ENSACAG00000015128	-	70	57.265	Anolis_carolinensis
ENSPMAG00000006518	-	58	56.835	WBGene00009141	ncbp-2	89	62.963	Caenorhabditis_elegans
ENSPMAG00000006518	-	56	48.485	ENSCAFG00000017990	NCBP2L	81	48.485	Canis_familiaris
ENSPMAG00000006518	-	56	48.485	ENSCAFG00020006690	NCBP2L	83	48.485	Canis_lupus_dingo
ENSPMAG00000006518	-	56	46.212	ENSCHIG00000020051	NCBP2L	84	46.212	Capra_hircus
ENSPMAG00000006518	-	56	52.632	ENSCHIG00000025737	-	85	52.632	Capra_hircus
ENSPMAG00000006518	-	58	49.630	ENSCCAG00000025053	NCBP2	98	49.630	Cebus_capucinus
ENSPMAG00000006518	-	50	55.085	ENSCATG00000030004	NCBP2	86	55.085	Cercocebus_atys
ENSPMAG00000006518	-	53	52.419	ENSCSAG00000008705	NCBP2	53	52.419	Chlorocebus_sabaeus
ENSPMAG00000006518	-	54	49.206	ENSCSAG00000000310	NCBP2L	82	49.206	Chlorocebus_sabaeus
ENSPMAG00000006518	-	50	56.410	ENSCPBG00000016711	-	70	56.410	Chrysemys_picta_bellii
ENSPMAG00000006518	-	56	50.758	ENSCING00000018317	-	71	50.758	Ciona_intestinalis
ENSPMAG00000006518	-	56	50.000	ENSCSAVG00000005823	-	71	50.000	Ciona_savignyi
ENSPMAG00000006518	-	50	58.475	ENSCSEG00000019322	ncbp2	72	58.475	Cynoglossus_semilaevis
ENSPMAG00000006518	-	56	46.212	ENSDNOG00000004831	NCBP2L	84	46.212	Dasypus_novemcinctus
ENSPMAG00000006518	-	56	54.545	FBgn0022943	Cbp20	86	54.545	Drosophila_melanogaster
ENSPMAG00000006518	-	57	45.255	ENSEASG00005019772	NCBP2L	81	47.445	Equus_asinus_asinus
ENSPMAG00000006518	-	55	46.565	ENSECAG00000003478	NCBP2L	87	48.855	Equus_caballus
ENSPMAG00000006518	-	50	38.793	ENSEEUG00000004605	NCBP2L	86	40.000	Erinaceus_europaeus
ENSPMAG00000006518	-	50	55.085	ENSFCAG00000029865	NCBP2	86	55.085	Felis_catus
ENSPMAG00000006518	-	51	58.333	ENSFALG00000011928	-	86	58.333	Ficedula_albicollis
ENSPMAG00000006518	-	54	54.762	ENSFHEG00000002308	ncbp2	70	59.649	Fundulus_heteroclitus
ENSPMAG00000006518	-	54	54.331	ENSGAFG00000010213	ncbp2	70	59.649	Gambusia_affinis
ENSPMAG00000006518	-	50	56.410	ENSGAGG00000015966	-	70	56.410	Gopherus_agassizii
ENSPMAG00000006518	-	53	48.780	ENSGGOG00000014581	NCBP2L	88	46.324	Gorilla_gorilla
ENSPMAG00000006518	-	50	45.299	ENSHGLG00000003263	-	71	45.299	Heterocephalus_glaber_female
ENSPMAG00000006518	-	50	55.085	ENSJJAG00000013908	Ncbp2	73	55.085	Jaculus_jaculus
ENSPMAG00000006518	-	51	57.500	ENSLAFG00000027581	NCBP2L	84	54.545	Loxodonta_africana
ENSPMAG00000006518	-	50	55.085	ENSMFAG00000001109	NCBP2	86	55.085	Macaca_fascicularis
ENSPMAG00000006518	-	55	54.688	ENSMMUG00000007825	NCBP2	86	55.085	Macaca_mulatta
ENSPMAG00000006518	-	50	55.085	ENSMNEG00000040649	NCBP2	86	55.085	Macaca_nemestrina
ENSPMAG00000006518	-	60	48.227	ENSMICG00000012328	-	94	47.552	Microcebus_murinus
ENSPMAG00000006518	-	53	54.839	ENSMODG00000024607	-	79	54.839	Monodelphis_domestica
ENSPMAG00000006518	-	53	54.839	ENSMODG00000024608	-	79	54.839	Monodelphis_domestica
ENSPMAG00000006518	-	52	54.545	ENSMODG00000023276	-	78	54.545	Monodelphis_domestica
ENSPMAG00000006518	-	56	50.382	ENSMPUG00000018445	NCBP2L	88	48.551	Mustela_putorius_furo
ENSPMAG00000006518	-	55	54.688	ENSNLEG00000001727	NCBP2	86	55.085	Nomascus_leucogenys
ENSPMAG00000006518	-	52	54.545	ENSMEUG00000008126	-	78	54.545	Notamacropus_eugenii
ENSPMAG00000006518	-	50	51.695	ENSODEG00000009435	-	83	51.695	Octodon_degus
ENSPMAG00000006518	-	52	52.066	ENSODEG00000013562	-	76	52.066	Octodon_degus
ENSPMAG00000006518	-	56	44.444	ENSODEG00000002405	-	79	43.885	Octodon_degus
ENSPMAG00000006518	-	57	53.383	ENSPPRG00000010989	NCBP2L	87	53.383	Panthera_pardus
ENSPMAG00000006518	-	50	55.085	ENSPTIG00000009963	NCBP2	86	55.085	Panthera_tigris_altaica
ENSPMAG00000006518	-	57	52.632	ENSPTIG00000005892	NCBP2L	87	52.632	Panthera_tigris_altaica
ENSPMAG00000006518	-	50	58.621	ENSPSIG00000008535	-	83	58.621	Pelodiscus_sinensis
ENSPMAG00000006518	-	59	46.429	ENSPPYG00000020614	NCBP2L	87	47.015	Pongo_abelii
ENSPMAG00000006518	-	50	55.085	ENSPCOG00000017267	NCBP2	86	55.085	Propithecus_coquereli
ENSPMAG00000006518	-	55	54.688	ENSRBIG00000028514	NCBP2	97	55.422	Rhinopithecus_bieti
ENSPMAG00000006518	-	59	51.799	ENSRROG00000032530	-	86	55.085	Rhinopithecus_roxellana
ENSPMAG00000006518	-	56	35.606	ENSSBOG00000006326	-	81	35.606	Saimiri_boliviensis_boliviensis
ENSPMAG00000006518	-	52	54.545	ENSSHAG00000012279	-	78	54.545	Sarcophilus_harrisii
ENSPMAG00000006518	-	50	56.780	ENSSFOG00015014972	ncbp2	70	58.772	Scleropages_formosus
ENSPMAG00000006518	-	50	51.695	ENSSARG00000014294	NCBP2	76	51.695	Sorex_araneus
ENSPMAG00000006518	-	50	56.410	ENSSPUG00000000715	-	71	56.410	Sphenodon_punctatus
ENSPMAG00000006518	-	51	49.167	ENSSSCG00000012562	NCBP2L	79	49.167	Sus_scrofa
ENSPMAG00000006518	-	50	59.322	ENSTRUG00000018355	ncbp2	72	59.322	Takifugu_rubripes
ENSPMAG00000006518	-	50	59.322	ENSTNIG00000006065	ncbp2	76	59.322	Tetraodon_nigroviridis
ENSPMAG00000006518	-	56	45.038	ENSUAMG00000006936	NCBP2L	81	45.038	Ursus_americanus
ENSPMAG00000006518	-	56	45.038	ENSUMAG00000010623	NCBP2L	81	45.038	Ursus_maritimus
ENSPMAG00000006518	-	50	55.085	ENSVPAG00000010369	NCBP2	91	55.085	Vicugna_pacos
ENSPMAG00000006518	-	50	55.085	ENSVVUG00000008595	NCBP2	77	55.085	Vulpes_vulpes