EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000006707 (Gene tree)
Gene ID: -
Gene Symbol: clp1
Alias: -
Full Name: cleavage and polyadenylation factor I subunit 1
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 4427 bases
Position: chrGL477919:41994-46420
Accession: ZDB-GENE-030131-5306
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000007403	Clp1	PF06807.14	2.4e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000007436	-	1275	-	ENSPMAP00000007403	424 (aa)	-	S4RQB7

Gene Model

Click here to download ENSPMAG00000006707's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000006707's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000006707	clp1	100	76.291	ENSG00000172409	CLP1	100	76.291	Homo_sapiens
ENSPMAG00000006707	clp1	97	68.171	ENSAPOG00000008242	clp1	95	68.171	Acanthochromis_polyacanthus
ENSPMAG00000006707	clp1	100	76.056	ENSAMEG00000014551	CLP1	98	76.056	Ailuropoda_melanoleuca
ENSPMAG00000006707	clp1	97	68.171	ENSACIG00000006310	clp1	95	68.171	Amphilophus_citrinellus
ENSPMAG00000006707	clp1	99	67.056	ENSAOCG00000010681	clp1	99	67.056	Amphiprion_ocellaris
ENSPMAG00000006707	clp1	97	68.171	ENSAPEG00000012165	clp1	98	68.171	Amphiprion_percula
ENSPMAG00000006707	clp1	97	68.646	ENSATEG00000012374	clp1	95	68.646	Anabas_testudineus
ENSPMAG00000006707	clp1	100	75.587	ENSACAG00000007139	CLP1	100	75.587	Anolis_carolinensis
ENSPMAG00000006707	clp1	100	76.291	ENSANAG00000034935	CLP1	100	76.291	Aotus_nancymaae
ENSPMAG00000006707	clp1	97	67.221	ENSACLG00000013573	clp1	95	67.221	Astatotilapia_calliptera
ENSPMAG00000006707	clp1	97	68.646	ENSAMXG00000014194	clp1	97	68.646	Astyanax_mexicanus
ENSPMAG00000006707	clp1	100	76.056	ENSBTAG00000006493	CLP1	100	76.056	Bos_taurus
ENSPMAG00000006707	clp1	99	44.626	WBGene00010304	clpf-1	99	44.626	Caenorhabditis_elegans
ENSPMAG00000006707	clp1	100	76.291	ENSCJAG00000008748	CLP1	100	76.291	Callithrix_jacchus
ENSPMAG00000006707	clp1	100	76.056	ENSCAFG00000007815	CLP1	100	76.056	Canis_familiaris
ENSPMAG00000006707	clp1	100	76.056	ENSCAFG00020000903	CLP1	100	76.056	Canis_lupus_dingo
ENSPMAG00000006707	clp1	100	75.587	ENSCHIG00000023497	CLP1	100	75.587	Capra_hircus
ENSPMAG00000006707	clp1	100	76.291	ENSTSYG00000006824	CLP1	99	76.291	Carlito_syrichta
ENSPMAG00000006707	clp1	100	76.941	ENSCAPG00000009703	CLP1	100	76.941	Cavia_aperea
ENSPMAG00000006707	clp1	97	77.482	ENSCPOG00000012554	CLP1	99	77.482	Cavia_porcellus
ENSPMAG00000006707	clp1	100	76.056	ENSCCAG00000031957	CLP1	100	76.056	Cebus_capucinus
ENSPMAG00000006707	clp1	100	76.291	ENSCATG00000044628	CLP1	100	76.291	Cercocebus_atys
ENSPMAG00000006707	clp1	100	76.291	ENSCLAG00000004094	CLP1	100	76.291	Chinchilla_lanigera
ENSPMAG00000006707	clp1	100	76.291	ENSCSAG00000005994	CLP1	100	76.291	Chlorocebus_sabaeus
ENSPMAG00000006707	clp1	100	75.117	ENSCPBG00000016843	CLP1	100	75.117	Chrysemys_picta_bellii
ENSPMAG00000006707	clp1	98	58.454	ENSCING00000003779	-	96	58.454	Ciona_intestinalis
ENSPMAG00000006707	clp1	99	60.142	ENSCSAVG00000003437	-	99	60.142	Ciona_savignyi
ENSPMAG00000006707	clp1	100	76.291	ENSCANG00000034335	CLP1	100	76.291	Colobus_angolensis_palliatus
ENSPMAG00000006707	clp1	100	76.056	ENSCGRG00001002227	CLP1	100	76.056	Cricetulus_griseus_chok1gshd
ENSPMAG00000006707	clp1	100	76.056	ENSCGRG00000004328	CLP1	100	76.056	Cricetulus_griseus_crigri
ENSPMAG00000006707	clp1	98	67.062	ENSCSEG00000008614	clp1	95	67.062	Cynoglossus_semilaevis
ENSPMAG00000006707	clp1	97	68.409	ENSCVAG00000020101	clp1	95	68.409	Cyprinodon_variegatus
ENSPMAG00000006707	clp1	97	68.735	ENSDARG00000063663	clp1	94	68.735	Danio_rerio
ENSPMAG00000006707	clp1	99	76.000	ENSDNOG00000042415	CLP1	90	76.000	Dasypus_novemcinctus
ENSPMAG00000006707	clp1	100	76.056	ENSDORG00000014685	Clp1	100	76.056	Dipodomys_ordii
ENSPMAG00000006707	clp1	99	52.941	FBgn0033842	cbc	99	52.941	Drosophila_melanogaster
ENSPMAG00000006707	clp1	100	76.291	ENSETEG00000003009	CLP1	100	76.291	Echinops_telfairi
ENSPMAG00000006707	clp1	98	74.940	ENSEBUG00000011648	clp1	98	74.940	Eptatretus_burgeri
ENSPMAG00000006707	clp1	100	76.291	ENSEASG00005002093	CLP1	100	76.291	Equus_asinus_asinus
ENSPMAG00000006707	clp1	100	76.291	ENSECAG00000011597	CLP1	100	76.291	Equus_caballus
ENSPMAG00000006707	clp1	100	76.056	ENSEEUG00000012771	CLP1	100	76.056	Erinaceus_europaeus
ENSPMAG00000006707	clp1	97	70.071	ENSELUG00000024048	clp1	95	70.071	Esox_lucius
ENSPMAG00000006707	clp1	100	76.056	ENSFCAG00000006633	CLP1	100	76.056	Felis_catus
ENSPMAG00000006707	clp1	99	75.592	ENSFALG00000011145	CLP1	99	75.592	Ficedula_albicollis
ENSPMAG00000006707	clp1	100	76.291	ENSFDAG00000000234	CLP1	100	76.291	Fukomys_damarensis
ENSPMAG00000006707	clp1	97	68.646	ENSFHEG00000014760	CLP1	95	68.646	Fundulus_heteroclitus
ENSPMAG00000006707	clp1	97	69.856	ENSGMOG00000019340	clp1	95	69.856	Gadus_morhua
ENSPMAG00000006707	clp1	100	75.352	ENSGALG00000007370	CLP1	100	75.352	Gallus_gallus
ENSPMAG00000006707	clp1	97	67.933	ENSGAFG00000003020	clp1	97	67.933	Gambusia_affinis
ENSPMAG00000006707	clp1	97	67.933	ENSGACG00000017832	clp1	95	67.933	Gasterosteus_aculeatus
ENSPMAG00000006707	clp1	100	75.352	ENSGAGG00000013279	CLP1	100	75.352	Gopherus_agassizii
ENSPMAG00000006707	clp1	100	76.291	ENSGGOG00000023006	CLP1	100	76.291	Gorilla_gorilla
ENSPMAG00000006707	clp1	97	67.458	ENSHBUG00000010436	clp1	95	67.458	Haplochromis_burtoni
ENSPMAG00000006707	clp1	100	76.291	ENSHGLG00000009914	CLP1	100	76.291	Heterocephalus_glaber_female
ENSPMAG00000006707	clp1	100	76.291	ENSHGLG00100006105	CLP1	100	76.291	Heterocephalus_glaber_male
ENSPMAG00000006707	clp1	99	67.202	ENSHCOG00000010072	clp1	99	67.202	Hippocampus_comes
ENSPMAG00000006707	clp1	97	68.884	ENSIPUG00000016238	clp1	94	68.884	Ictalurus_punctatus
ENSPMAG00000006707	clp1	100	76.056	ENSSTOG00000029257	CLP1	100	76.056	Ictidomys_tridecemlineatus
ENSPMAG00000006707	clp1	100	76.056	ENSJJAG00000023691	Clp1	100	76.056	Jaculus_jaculus
ENSPMAG00000006707	clp1	99	66.200	ENSKMAG00000011990	clp1	97	66.200	Kryptolebias_marmoratus
ENSPMAG00000006707	clp1	97	68.884	ENSLBEG00000010201	clp1	95	68.884	Labrus_bergylta
ENSPMAG00000006707	clp1	99	74.408	ENSLACG00000003160	CLP1	99	74.408	Latimeria_chalumnae
ENSPMAG00000006707	clp1	73	68.634	ENSLOCG00000008074	clp1	100	68.634	Lepisosteus_oculatus
ENSPMAG00000006707	clp1	100	76.056	ENSLAFG00000014907	CLP1	100	76.056	Loxodonta_africana
ENSPMAG00000006707	clp1	100	76.291	ENSMFAG00000046074	CLP1	100	76.291	Macaca_fascicularis
ENSPMAG00000006707	clp1	100	76.291	ENSMMUG00000038007	CLP1	99	76.291	Macaca_mulatta
ENSPMAG00000006707	clp1	100	76.291	ENSMNEG00000000259	CLP1	100	76.291	Macaca_nemestrina
ENSPMAG00000006707	clp1	100	76.291	ENSMLEG00000043556	CLP1	100	76.291	Mandrillus_leucophaeus
ENSPMAG00000006707	clp1	97	68.171	ENSMAMG00000002149	clp1	95	68.171	Mastacembelus_armatus
ENSPMAG00000006707	clp1	97	67.221	ENSMZEG00005002850	clp1	95	67.221	Maylandia_zebra
ENSPMAG00000006707	clp1	100	75.352	ENSMGAG00000009643	CLP1	100	75.352	Meleagris_gallopavo
ENSPMAG00000006707	clp1	100	75.822	ENSMAUG00000016261	Clp1	100	75.822	Mesocricetus_auratus
ENSPMAG00000006707	clp1	100	76.056	ENSMICG00000004895	CLP1	100	76.056	Microcebus_murinus
ENSPMAG00000006707	clp1	100	76.291	ENSMOCG00000005498	Clp1	100	76.291	Microtus_ochrogaster
ENSPMAG00000006707	clp1	97	67.933	ENSMMOG00000003229	clp1	95	67.933	Mola_mola
ENSPMAG00000006707	clp1	100	75.822	ENSMODG00000024148	-	100	76.291	Monodelphis_domestica
ENSPMAG00000006707	clp1	100	75.822	ENSMODG00000020107	-	100	76.291	Monodelphis_domestica
ENSPMAG00000006707	clp1	99	66.667	ENSMALG00000014239	clp1	98	66.667	Monopterus_albus
ENSPMAG00000006707	clp1	100	76.291	MGP_CAROLIEiJ_G0023726	Clp1	100	76.291	Mus_caroli
ENSPMAG00000006707	clp1	100	76.291	ENSMUSG00000027079	Clp1	100	76.291	Mus_musculus
ENSPMAG00000006707	clp1	100	76.526	MGP_PahariEiJ_G0025177	Clp1	100	76.526	Mus_pahari
ENSPMAG00000006707	clp1	100	76.291	MGP_SPRETEiJ_G0024646	Clp1	100	76.291	Mus_spretus
ENSPMAG00000006707	clp1	100	76.056	ENSMPUG00000000268	CLP1	100	76.056	Mustela_putorius_furo
ENSPMAG00000006707	clp1	100	76.056	ENSMLUG00000007904	CLP1	100	76.056	Myotis_lucifugus
ENSPMAG00000006707	clp1	100	75.822	ENSNGAG00000006165	Clp1	100	75.822	Nannospalax_galili
ENSPMAG00000006707	clp1	97	67.221	ENSNBRG00000005225	clp1	95	67.221	Neolamprologus_brichardi
ENSPMAG00000006707	clp1	75	75.556	ENSNLEG00000012809	-	100	75.556	Nomascus_leucogenys
ENSPMAG00000006707	clp1	100	75.822	ENSMEUG00000010949	CLP1	99	76.291	Notamacropus_eugenii
ENSPMAG00000006707	clp1	70	76.846	ENSOPRG00000007329	CLP1	100	76.846	Ochotona_princeps
ENSPMAG00000006707	clp1	100	76.291	ENSODEG00000011410	CLP1	100	76.291	Octodon_degus
ENSPMAG00000006707	clp1	97	66.983	ENSONIG00000005089	clp1	95	66.983	Oreochromis_niloticus
ENSPMAG00000006707	clp1	100	76.056	ENSOCUG00000007045	CLP1	100	76.056	Oryctolagus_cuniculus
ENSPMAG00000006707	clp1	99	66.435	ENSORLG00000003647	clp1	98	66.435	Oryzias_latipes
ENSPMAG00000006707	clp1	99	66.204	ENSORLG00020016676	clp1	98	66.204	Oryzias_latipes_hni
ENSPMAG00000006707	clp1	99	66.435	ENSORLG00015019484	clp1	98	66.435	Oryzias_latipes_hsok
ENSPMAG00000006707	clp1	99	66.898	ENSOMEG00000021303	clp1	98	66.898	Oryzias_melastigma
ENSPMAG00000006707	clp1	100	76.056	ENSOGAG00000004508	CLP1	100	76.056	Otolemur_garnettii
ENSPMAG00000006707	clp1	100	74.883	ENSOARG00000010145	CLP1	98	74.883	Ovis_aries
ENSPMAG00000006707	clp1	100	76.291	ENSPPAG00000041519	CLP1	100	76.291	Pan_paniscus
ENSPMAG00000006707	clp1	100	76.056	ENSPPRG00000006135	CLP1	100	76.056	Panthera_pardus
ENSPMAG00000006707	clp1	100	76.056	ENSPTIG00000015866	CLP1	100	76.056	Panthera_tigris_altaica
ENSPMAG00000006707	clp1	100	76.291	ENSPTRG00000047318	CLP1	100	76.291	Pan_troglodytes
ENSPMAG00000006707	clp1	100	76.291	ENSPANG00000017078	CLP1	97	76.291	Papio_anubis
ENSPMAG00000006707	clp1	97	71.256	ENSPKIG00000007697	clp1	94	71.256	Paramormyrops_kingsleyae
ENSPMAG00000006707	clp1	95	73.945	ENSPSIG00000005468	CLP1	100	73.945	Pelodiscus_sinensis
ENSPMAG00000006707	clp1	97	67.458	ENSPMGG00000012171	clp1	95	67.458	Periophthalmus_magnuspinnatus
ENSPMAG00000006707	clp1	100	76.291	ENSPEMG00000011213	-	100	76.291	Peromyscus_maniculatus_bairdii
ENSPMAG00000006707	clp1	100	75.822	ENSPCIG00000011899	CLP1	99	76.291	Phascolarctos_cinereus
ENSPMAG00000006707	clp1	98	67.773	ENSPFOG00000008169	clp1	95	67.773	Poecilia_formosa
ENSPMAG00000006707	clp1	98	67.773	ENSPLAG00000022388	clp1	97	67.773	Poecilia_latipinna
ENSPMAG00000006707	clp1	98	67.773	ENSPMEG00000021088	clp1	97	67.773	Poecilia_mexicana
ENSPMAG00000006707	clp1	97	68.171	ENSPREG00000017802	clp1	95	68.171	Poecilia_reticulata
ENSPMAG00000006707	clp1	53	75.446	ENSPPYG00000003266	-	100	75.446	Pongo_abelii
ENSPMAG00000006707	clp1	100	76.056	ENSPCOG00000000360	CLP1	98	76.056	Propithecus_coquereli
ENSPMAG00000006707	clp1	100	76.056	ENSPVAG00000016270	CLP1	100	76.056	Pteropus_vampyrus
ENSPMAG00000006707	clp1	97	67.458	ENSPNYG00000017274	clp1	95	67.458	Pundamilia_nyererei
ENSPMAG00000006707	clp1	97	69.121	ENSPNAG00000026460	clp1	94	69.121	Pygocentrus_nattereri
ENSPMAG00000006707	clp1	100	76.291	ENSRNOG00000007416	Clp1	100	76.291	Rattus_norvegicus
ENSPMAG00000006707	clp1	100	76.291	ENSRBIG00000018191	CLP1	100	76.291	Rhinopithecus_bieti
ENSPMAG00000006707	clp1	100	76.291	ENSRROG00000039265	CLP1	100	76.291	Rhinopithecus_roxellana
ENSPMAG00000006707	clp1	96	63.636	ENSSBOG00000010558	-	93	63.636	Saimiri_boliviensis_boliviensis
ENSPMAG00000006707	clp1	100	76.291	ENSSBOG00000032517	-	100	76.291	Saimiri_boliviensis_boliviensis
ENSPMAG00000006707	clp1	100	75.822	ENSSHAG00000015695	CLP1	100	76.291	Sarcophilus_harrisii
ENSPMAG00000006707	clp1	97	69.014	ENSSFOG00015000628	clp1	96	69.014	Scleropages_formosus
ENSPMAG00000006707	clp1	97	68.884	ENSSMAG00000019423	clp1	94	68.884	Scophthalmus_maximus
ENSPMAG00000006707	clp1	97	68.646	ENSSDUG00000014495	clp1	95	68.646	Seriola_dumerili
ENSPMAG00000006707	clp1	97	68.646	ENSSLDG00000000937	clp1	95	68.646	Seriola_lalandi_dorsalis
ENSPMAG00000006707	clp1	53	74.888	ENSSARG00000002459	CLP1	100	74.888	Sorex_araneus
ENSPMAG00000006707	clp1	100	74.883	ENSSPUG00000016811	CLP1	100	74.883	Sphenodon_punctatus
ENSPMAG00000006707	clp1	97	67.696	ENSSPAG00000016052	clp1	95	67.696	Stegastes_partitus
ENSPMAG00000006707	clp1	100	76.056	ENSSSCG00000031442	CLP1	100	76.056	Sus_scrofa
ENSPMAG00000006707	clp1	99	75.355	ENSTGUG00000007002	CLP1	99	75.355	Taeniopygia_guttata
ENSPMAG00000006707	clp1	97	68.106	ENSTRUG00000012602	clp1	95	68.106	Takifugu_rubripes
ENSPMAG00000006707	clp1	97	68.106	ENSTNIG00000013125	clp1	95	68.106	Tetraodon_nigroviridis
ENSPMAG00000006707	clp1	100	75.822	ENSTBEG00000009975	CLP1	100	75.822	Tupaia_belangeri
ENSPMAG00000006707	clp1	100	75.822	ENSTTRG00000002096	CLP1	100	75.822	Tursiops_truncatus
ENSPMAG00000006707	clp1	100	76.056	ENSUAMG00000011388	CLP1	100	76.056	Ursus_americanus
ENSPMAG00000006707	clp1	100	76.056	ENSUMAG00000018317	CLP1	100	76.056	Ursus_maritimus
ENSPMAG00000006707	clp1	100	76.056	ENSVVUG00000017138	CLP1	97	76.056	Vulpes_vulpes
ENSPMAG00000006707	clp1	98	67.225	ENSXETG00000007088	clp1	95	67.703	Xenopus_tropicalis
ENSPMAG00000006707	clp1	97	67.696	ENSXCOG00000002287	clp1	95	67.696	Xiphophorus_couchianus
ENSPMAG00000006707	clp1	97	67.696	ENSXMAG00000009783	clp1	95	67.696	Xiphophorus_maculatus