EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMAG00000006708 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 1664 bases
Position: chrGL498585:318-1981
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000007400	zf-C2H2	PF00096.26	2.3e-28	1	5
ENSPMAP00000007400	zf-C2H2	PF00096.26	2.3e-28	2	5
ENSPMAP00000007400	zf-C2H2	PF00096.26	2.3e-28	3	5
ENSPMAP00000007400	zf-C2H2	PF00096.26	2.3e-28	4	5
ENSPMAP00000007400	zf-C2H2	PF00096.26	2.3e-28	5	5
ENSPMAP00000007400	zf-met	PF12874.7	3.8e-09	1	2
ENSPMAP00000007400	zf-met	PF12874.7	3.8e-09	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000007433	-	570	-	ENSPMAP00000007400	190 (aa)	-	S4RQB4

Gene Model

Click here to download ENSPMAG00000006708's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000006708's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMAG00000006708	-	98	33.621	ENSPMAG00000007983	-	97	33.621
ENSPMAG00000006708	-	97	36.517	ENSPMAG00000004189	-	98	36.517
ENSPMAG00000006708	-	96	34.058	ENSPMAG00000003606	-	71	34.058
ENSPMAG00000006708	-	99	43.478	ENSPMAG00000005248	prdm5	99	43.478
ENSPMAG00000006708	-	97	38.095	ENSPMAG00000008196	-	100	38.095
ENSPMAG00000006708	-	95	46.377	ENSPMAG00000004344	-	85	46.377
ENSPMAG00000006708	-	99	38.806	ENSPMAG00000004710	znf236	51	38.806
ENSPMAG00000006708	-	98	35.519	ENSPMAG00000001294	-	100	35.519
ENSPMAG00000006708	-	97	31.737	ENSPMAG00000006198	ZBTB47	70	31.737
ENSPMAG00000006708	-	97	45.312	ENSPMAG00000007084	-	100	45.312
ENSPMAG00000006708	-	97	35.185	ENSPMAG00000002022	-	95	35.185
ENSPMAG00000006708	-	97	37.963	ENSPMAG00000006066	znf366	93	37.963
ENSPMAG00000006708	-	96	35.922	ENSPMAG00000000839	-	94	35.922
ENSPMAG00000006708	-	97	35.429	ENSPMAG00000007731	-	91	35.429
ENSPMAG00000006708	-	99	37.895	ENSPMAG00000007500	ZNF436	100	37.640
ENSPMAG00000006708	-	97	37.079	ENSPMAG00000000404	-	97	37.079
ENSPMAG00000006708	-	97	36.022	ENSPMAG00000000401	-	87	36.022
ENSPMAG00000006708	-	100	32.796	ENSPMAG00000009794	PRDM15	59	32.796
ENSPMAG00000006708	-	97	35.772	ENSPMAG00000008879	-	100	35.772
ENSPMAG00000006708	-	92	38.095	ENSPMAG00000008691	-	99	38.095
ENSPMAG00000006708	-	99	32.886	ENSPMAG00000000706	-	100	32.886

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000006708	-	97	44.134	ENSG00000196757	ZNF700	82	44.134	Homo_sapiens
ENSPMAG00000006708	-	97	44.262	ENSAMEG00000012006	-	85	43.716	Ailuropoda_melanoleuca
ENSPMAG00000006708	-	96	41.722	ENSBTAG00000049339	-	80	41.722	Bos_taurus
ENSPMAG00000006708	-	98	44.262	ENSBTAG00000016721	-	99	44.262	Bos_taurus
ENSPMAG00000006708	-	98	42.473	ENSCJAG00000005453	-	98	42.473	Callithrix_jacchus
ENSPMAG00000006708	-	98	45.055	ENSCAFG00000031471	-	84	45.055	Canis_familiaris
ENSPMAG00000006708	-	97	45.405	ENSCAFG00000032123	-	84	45.405	Canis_familiaris
ENSPMAG00000006708	-	98	45.055	ENSCAFG00020005083	-	98	45.055	Canis_lupus_dingo
ENSPMAG00000006708	-	97	45.055	ENSCAFG00020005065	-	98	45.055	Canis_lupus_dingo
ENSPMAG00000006708	-	98	43.258	ENSCHIG00000020779	-	82	43.258	Capra_hircus
ENSPMAG00000006708	-	98	44.262	ENSCHIG00000008992	-	92	44.262	Capra_hircus
ENSPMAG00000006708	-	100	40.642	ENSCCAG00000024419	-	97	40.642	Cebus_capucinus
ENSPMAG00000006708	-	97	43.258	ENSCCAG00000027336	ZNF791	83	43.258	Cebus_capucinus
ENSPMAG00000006708	-	97	43.820	ENSCATG00000041735	ZNF791	86	43.820	Cercocebus_atys
ENSPMAG00000006708	-	98	43.169	ENSCATG00000025335	ZNF700	79	43.169	Cercocebus_atys
ENSPMAG00000006708	-	98	44.262	ENSCSAG00000006686	ZNF700	78	44.262	Chlorocebus_sabaeus
ENSPMAG00000006708	-	97	43.820	ENSCSAG00000006632	ZNF791	91	43.820	Chlorocebus_sabaeus
ENSPMAG00000006708	-	99	43.889	ENSCGRG00001001639	Zfp882	86	43.889	Cricetulus_griseus_chok1gshd
ENSPMAG00000006708	-	99	45.699	ENSCGRG00000013919	Zfp709	76	45.699	Cricetulus_griseus_crigri
ENSPMAG00000006708	-	97	45.902	ENSEASG00005014394	-	83	45.902	Equus_asinus_asinus
ENSPMAG00000006708	-	98	47.568	ENSEASG00005004288	-	94	47.568	Equus_asinus_asinus
ENSPMAG00000006708	-	97	46.328	ENSEASG00005004237	-	72	46.328	Equus_asinus_asinus
ENSPMAG00000006708	-	98	47.283	ENSEASG00005011546	-	99	47.283	Equus_asinus_asinus
ENSPMAG00000006708	-	99	44.809	ENSEASG00005004284	-	84	44.809	Equus_asinus_asinus
ENSPMAG00000006708	-	98	44.776	ENSEASG00005022060	-	87	44.776	Equus_asinus_asinus
ENSPMAG00000006708	-	98	46.927	ENSEASG00005004229	-	89	46.927	Equus_asinus_asinus
ENSPMAG00000006708	-	98	45.355	ENSEASG00005004225	-	98	45.355	Equus_asinus_asinus
ENSPMAG00000006708	-	97	50.000	ENSEASG00005004242	-	78	50.000	Equus_asinus_asinus
ENSPMAG00000006708	-	98	46.154	ENSECAG00000031831	-	86	46.154	Equus_caballus
ENSPMAG00000006708	-	98	45.355	ENSECAG00000036480	-	82	45.355	Equus_caballus
ENSPMAG00000006708	-	98	44.776	ENSECAG00000032997	-	91	44.776	Equus_caballus
ENSPMAG00000006708	-	98	47.826	ENSECAG00000018175	-	96	47.826	Equus_caballus
ENSPMAG00000006708	-	97	45.810	ENSECAG00000034536	-	88	45.810	Equus_caballus
ENSPMAG00000006708	-	99	44.505	ENSECAG00000024804	-	93	44.505	Equus_caballus
ENSPMAG00000006708	-	98	47.568	ENSECAG00000009346	-	94	47.568	Equus_caballus
ENSPMAG00000006708	-	98	47.826	ENSECAG00000000636	-	82	47.826	Equus_caballus
ENSPMAG00000006708	-	96	45.902	ENSECAG00000005497	-	92	45.902	Equus_caballus
ENSPMAG00000006708	-	97	47.568	ENSECAG00000018881	-	96	47.568	Equus_caballus
ENSPMAG00000006708	-	100	40.690	ENSEEUG00000013556	-	88	40.690	Erinaceus_europaeus
ENSPMAG00000006708	-	97	43.956	ENSEEUG00000009480	-	79	43.956	Erinaceus_europaeus
ENSPMAG00000006708	-	97	41.584	ENSEEUG00000008954	-	83	41.584	Erinaceus_europaeus
ENSPMAG00000006708	-	98	44.385	ENSFCAG00000039667	-	87	43.836	Felis_catus
ENSPMAG00000006708	-	97	44.776	ENSGGOG00000011661	ZNF878	81	44.776	Gorilla_gorilla
ENSPMAG00000006708	-	97	44.134	ENSGGOG00000038420	ZNF700	77	44.134	Gorilla_gorilla
ENSPMAG00000006708	-	100	45.161	ENSJJAG00000012972	Zfp709	85	45.161	Jaculus_jaculus
ENSPMAG00000006708	-	97	41.899	ENSJJAG00000014350	Zfp961	71	41.899	Jaculus_jaculus
ENSPMAG00000006708	-	98	43.169	ENSMFAG00000034497	ZNF700	79	43.169	Macaca_fascicularis
ENSPMAG00000006708	-	97	43.820	ENSMFAG00000036181	ZNF791	86	43.820	Macaca_fascicularis
ENSPMAG00000006708	-	97	43.820	ENSMMUG00000016862	ZNF791	86	43.820	Macaca_mulatta
ENSPMAG00000006708	-	98	43.169	ENSMMUG00000012587	ZNF700	79	43.169	Macaca_mulatta
ENSPMAG00000006708	-	97	43.820	ENSMNEG00000045545	ZNF791	93	43.820	Macaca_nemestrina
ENSPMAG00000006708	-	98	43.169	ENSMNEG00000030711	ZNF700	80	44.444	Macaca_nemestrina
ENSPMAG00000006708	-	97	43.820	ENSMLEG00000034449	ZNF791	86	43.820	Mandrillus_leucophaeus
ENSPMAG00000006708	-	97	41.011	ENSMAUG00000007713	Zfp868	75	41.722	Mesocricetus_auratus
ENSPMAG00000006708	-	99	44.444	ENSMAUG00000010647	Zfp882	88	44.444	Mesocricetus_auratus
ENSPMAG00000006708	-	97	45.405	ENSMICG00000033630	-	74	45.405	Microcebus_murinus
ENSPMAG00000006708	-	98	41.436	ENSMICG00000044274	-	71	41.436	Microcebus_murinus
ENSPMAG00000006708	-	97	44.693	ENSMICG00000042598	-	69	44.693	Microcebus_murinus
ENSPMAG00000006708	-	97	42.623	ENSMICG00000027210	-	78	42.623	Microcebus_murinus
ENSPMAG00000006708	-	97	42.045	ENSMOCG00000020165	Zfp101	65	42.045	Microtus_ochrogaster
ENSPMAG00000006708	-	100	39.344	ENSMOCG00000014774	Zfp961	69	41.899	Microtus_ochrogaster
ENSPMAG00000006708	-	99	43.333	MGP_CAROLIEiJ_G0031203	Zfp882	86	43.333	Mus_caroli
ENSPMAG00000006708	-	97	43.258	MGP_CAROLIEiJ_G0016437	Zfp867	78	43.258	Mus_caroli
ENSPMAG00000006708	-	97	43.258	ENSMUSG00000054519	Zfp867	78	43.258	Mus_musculus
ENSPMAG00000006708	-	99	45.213	ENSMUSG00000056019	Zfp709	82	45.213	Mus_musculus
ENSPMAG00000006708	-	99	43.333	ENSMUSG00000089857	Zfp882	86	43.333	Mus_musculus
ENSPMAG00000006708	-	97	43.258	MGP_PahariEiJ_G0017567	Zfp867	79	43.258	Mus_pahari
ENSPMAG00000006708	-	99	43.889	MGP_PahariEiJ_G0021668	Zfp882	85	43.889	Mus_pahari
ENSPMAG00000006708	-	97	43.258	MGP_SPRETEiJ_G0017272	Zfp867	78	43.258	Mus_spretus
ENSPMAG00000006708	-	98	45.055	ENSMPUG00000004877	-	87	45.055	Mustela_putorius_furo
ENSPMAG00000006708	-	97	45.405	ENSMPUG00000004901	-	75	45.405	Mustela_putorius_furo
ENSPMAG00000006708	-	98	43.784	ENSMLUG00000003693	-	81	43.784	Myotis_lucifugus
ENSPMAG00000006708	-	97	44.693	ENSNLEG00000012661	ZNF700	78	44.693	Nomascus_leucogenys
ENSPMAG00000006708	-	98	41.420	ENSOCUG00000029755	-	87	46.154	Oryctolagus_cuniculus
ENSPMAG00000006708	-	98	44.444	ENSOGAG00000002111	-	86	43.284	Otolemur_garnettii
ENSPMAG00000006708	-	98	44.262	ENSOARG00000012703	-	86	44.262	Ovis_aries
ENSPMAG00000006708	-	96	41.538	ENSOARG00000012765	-	74	41.538	Ovis_aries
ENSPMAG00000006708	-	97	43.716	ENSPPRG00000011201	-	84	43.716	Panthera_pardus
ENSPMAG00000006708	-	98	44.737	ENSPTIG00000012277	-	93	44.737	Panthera_tigris_altaica
ENSPMAG00000006708	-	98	44.800	ENSPTIG00000009499	-	99	44.800	Panthera_tigris_altaica
ENSPMAG00000006708	-	97	45.055	ENSPTIG00000009517	-	98	45.055	Panthera_tigris_altaica
ENSPMAG00000006708	-	97	44.134	ENSPTRG00000010515	ZNF700	78	44.134	Pan_troglodytes
ENSPMAG00000006708	-	98	43.169	ENSPANG00000004914	ZNF700	79	43.169	Papio_anubis
ENSPMAG00000006708	-	99	46.237	ENSPEMG00000022834	Zfp709	82	46.237	Peromyscus_maniculatus_bairdii
ENSPMAG00000006708	-	97	44.262	ENSPPYG00000029413	-	85	44.262	Pongo_abelii
ENSPMAG00000006708	-	97	43.575	ENSPPYG00000009590	ZNF700	80	43.575	Pongo_abelii
ENSPMAG00000006708	-	97	44.776	ENSPPYG00000009596	ZNF791	87	44.776	Pongo_abelii
ENSPMAG00000006708	-	98	43.429	ENSPCAG00000007476	-	93	42.541	Procavia_capensis
ENSPMAG00000006708	-	97	44.865	ENSPCOG00000024437	-	75	44.865	Propithecus_coquereli
ENSPMAG00000006708	-	97	45.361	ENSPCOG00000025734	-	84	45.361	Propithecus_coquereli
ENSPMAG00000006708	-	97	43.200	ENSPCOG00000014758	-	92	43.200	Propithecus_coquereli
ENSPMAG00000006708	-	97	45.506	ENSPCOG00000015720	ZNF791	85	45.506	Propithecus_coquereli
ENSPMAG00000006708	-	100	44.324	ENSPVAG00000002257	-	72	44.324	Pteropus_vampyrus
ENSPMAG00000006708	-	97	44.505	ENSPVAG00000015563	-	86	44.505	Pteropus_vampyrus
ENSPMAG00000006708	-	96	40.845	ENSPVAG00000001626	-	82	40.845	Pteropus_vampyrus
ENSPMAG00000006708	-	98	43.017	ENSRNOG00000022431	Zfp867	79	43.017	Rattus_norvegicus
ENSPMAG00000006708	-	99	43.889	ENSRNOG00000016417	Zfp136	86	43.889	Rattus_norvegicus
ENSPMAG00000006708	-	97	47.761	ENSRBIG00000041827	ZNF878	92	47.761	Rhinopithecus_bieti
ENSPMAG00000006708	-	98	45.522	ENSRBIG00000043636	ZNF700	80	43.548	Rhinopithecus_bieti
ENSPMAG00000006708	-	97	43.284	ENSRROG00000031644	ZNF791	86	43.284	Rhinopithecus_roxellana
ENSPMAG00000006708	-	98	43.784	ENSRROG00000030540	ZNF700	78	43.716	Rhinopithecus_roxellana
ENSPMAG00000006708	-	97	43.357	ENSSBOG00000024486	ZNF791	86	43.357	Saimiri_boliviensis_boliviensis
ENSPMAG00000006708	-	97	42.077	ENSSSCG00000039774	-	77	41.848	Sus_scrofa
ENSPMAG00000006708	-	98	43.956	ENSSSCG00000022634	-	91	43.956	Sus_scrofa
ENSPMAG00000006708	-	98	43.407	ENSSSCG00000029347	-	89	42.703	Sus_scrofa
ENSPMAG00000006708	-	96	45.455	ENSSSCG00000036608	-	90	45.455	Sus_scrofa
ENSPMAG00000006708	-	97	43.169	ENSTTRG00000000768	-	84	43.716	Tursiops_truncatus
ENSPMAG00000006708	-	97	44.324	ENSTTRG00000003482	-	98	44.324	Tursiops_truncatus
ENSPMAG00000006708	-	97	45.055	ENSUAMG00000019652	-	82	45.055	Ursus_americanus
ENSPMAG00000006708	-	97	44.865	ENSUAMG00000017817	-	94	44.865	Ursus_americanus
ENSPMAG00000006708	-	97	44.865	ENSUMAG00000019496	-	94	44.865	Ursus_maritimus
ENSPMAG00000006708	-	98	45.055	ENSUMAG00000007577	-	98	45.055	Ursus_maritimus
ENSPMAG00000006708	-	100	46.237	ENSVPAG00000009652	-	84	46.237	Vicugna_pacos
ENSPMAG00000006708	-	97	45.055	ENSVVUG00000023811	-	98	45.055	Vulpes_vulpes
ENSPMAG00000006708	-	98	45.055	ENSVVUG00000023819	-	97	45.055	Vulpes_vulpes