EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMAG00000006731 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Plus strand
Length: 29308 bases
Position: chrGL477584:36900-66207
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000007421	dsrm	PF00035.26	1.6e-28	1	2
ENSPMAP00000007421	dsrm	PF00035.26	1.6e-28	2	2
ENSPMAP00000007421	A_deamin	PF02137.18	1e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000007454	-	1161	-	ENSPMAP00000007421	387 (aa)	-	S4RQD5

Gene Model

Click here to download ENSPMAG00000006731's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000006731's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMAG00000006731	-	98	62.368	ENSPMAG00000007453	-	52	62.730

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000006731	-	97	66.406	ENSG00000197381	ADARB1	65	69.792	Homo_sapiens
ENSPMAG00000006731	-	98	64.767	ENSAPOG00000021651	adarb1b	53	65.553	Acanthochromis_polyacanthus
ENSPMAG00000006731	-	97	67.895	ENSAPOG00000021275	-	57	66.667	Acanthochromis_polyacanthus
ENSPMAG00000006731	-	98	65.039	ENSAMEG00000001885	ADARB1	51	66.067	Ailuropoda_melanoleuca
ENSPMAG00000006731	-	99	61.440	ENSACIG00000024297	-	54	61.340	Amphilophus_citrinellus
ENSPMAG00000006731	-	98	63.590	ENSACIG00000004927	adarb1b	53	65.039	Amphilophus_citrinellus
ENSPMAG00000006731	-	98	64.767	ENSAOCG00000004046	adarb1b	53	65.553	Amphiprion_ocellaris
ENSPMAG00000006731	-	97	67.632	ENSAOCG00000001169	-	53	66.406	Amphiprion_ocellaris
ENSPMAG00000006731	-	97	67.632	ENSAPEG00000011629	-	54	66.406	Amphiprion_percula
ENSPMAG00000006731	-	98	64.767	ENSAPEG00000007937	adarb1b	53	65.553	Amphiprion_percula
ENSPMAG00000006731	-	98	65.128	ENSATEG00000011777	adarb1b	53	65.553	Anabas_testudineus
ENSPMAG00000006731	-	97	62.176	ENSATEG00000013653	-	52	61.917	Anabas_testudineus
ENSPMAG00000006731	-	99	65.835	ENSAPLG00000015600	ADARB1	53	65.586	Anas_platyrhynchos
ENSPMAG00000006731	-	98	67.717	ENSACAG00000009710	ADARB1	52	67.717	Anolis_carolinensis
ENSPMAG00000006731	-	99	65.482	ENSANAG00000023685	ADARB1	53	65.482	Aotus_nancymaae
ENSPMAG00000006731	-	98	64.508	ENSACLG00000006817	adarb1b	53	65.553	Astatotilapia_calliptera
ENSPMAG00000006731	-	98	61.026	ENSACLG00000009531	-	53	61.026	Astatotilapia_calliptera
ENSPMAG00000006731	-	97	67.989	ENSAMXG00000018363	adarb1b	53	68.063	Astyanax_mexicanus
ENSPMAG00000006731	-	99	64.377	ENSAMXG00000013675	adarb1a	54	64.286	Astyanax_mexicanus
ENSPMAG00000006731	-	98	66.753	ENSBTAG00000017486	ADARB1	51	66.753	Bos_taurus
ENSPMAG00000006731	-	98	65.979	ENSCJAG00000018646	ADARB1	52	65.561	Callithrix_jacchus
ENSPMAG00000006731	-	98	66.324	ENSCAFG00000011077	ADARB1	52	66.067	Canis_familiaris
ENSPMAG00000006731	-	98	66.324	ENSCAFG00020019446	ADARB1	84	63.363	Canis_lupus_dingo
ENSPMAG00000006731	-	98	66.753	ENSCHIG00000018259	ADARB1	52	66.753	Capra_hircus
ENSPMAG00000006731	-	98	65.464	ENSTSYG00000014318	ADARB1	52	65.553	Carlito_syrichta
ENSPMAG00000006731	-	97	65.625	ENSCAPG00000014999	ADARB1	60	64.796	Cavia_aperea
ENSPMAG00000006731	-	97	65.625	ENSCPOG00000022969	ADARB1	61	64.796	Cavia_porcellus
ENSPMAG00000006731	-	98	65.561	ENSCCAG00000029934	ADARB1	52	65.561	Cebus_capucinus
ENSPMAG00000006731	-	97	65.885	ENSCATG00000029876	ADARB1	52	65.464	Cercocebus_atys
ENSPMAG00000006731	-	97	65.104	ENSCLAG00000010595	ADARB1	53	63.980	Chinchilla_lanigera
ENSPMAG00000006731	-	97	65.885	ENSCSAG00000007489	ADARB1	52	65.464	Chlorocebus_sabaeus
ENSPMAG00000006731	-	98	67.277	ENSCPBG00000004191	ADARB1	54	65.823	Chrysemys_picta_bellii
ENSPMAG00000006731	-	97	66.146	ENSCANG00000005413	ADARB1	52	65.722	Colobus_angolensis_palliatus
ENSPMAG00000006731	-	98	64.267	ENSCGRG00001023922	Adarb1	52	63.776	Cricetulus_griseus_chok1gshd
ENSPMAG00000006731	-	98	64.267	ENSCGRG00000005984	Adarb1	52	63.776	Cricetulus_griseus_crigri
ENSPMAG00000006731	-	98	65.885	ENSCSEG00000019137	adarb1b	53	65.729	Cynoglossus_semilaevis
ENSPMAG00000006731	-	97	49.471	ENSCSEG00000005961	-	54	49.471	Cynoglossus_semilaevis
ENSPMAG00000006731	-	98	65.544	ENSCVAG00000006161	adarb1b	53	65.296	Cyprinodon_variegatus
ENSPMAG00000006731	-	82	55.828	ENSCVAG00000010248	-	88	55.718	Cyprinodon_variegatus
ENSPMAG00000006731	-	97	64.583	ENSDARG00000041609	adarb1a	55	63.797	Danio_rerio
ENSPMAG00000006731	-	98	65.482	ENSDARG00000003544	adarb1b	53	65.985	Danio_rerio
ENSPMAG00000006731	-	97	65.285	ENSDNOG00000006954	ADARB1	55	66.931	Dasypus_novemcinctus
ENSPMAG00000006731	-	98	64.872	ENSDORG00000000619	Adarb1	53	64.377	Dipodomys_ordii
ENSPMAG00000006731	-	97	66.495	ENSETEG00000007374	ADARB1	50	65.414	Echinops_telfairi
ENSPMAG00000006731	-	99	61.750	ENSEBUG00000004654	-	93	60.247	Eptatretus_burgeri
ENSPMAG00000006731	-	98	66.495	ENSEASG00005007085	ADARB1	52	66.495	Equus_asinus_asinus
ENSPMAG00000006731	-	98	66.237	ENSECAG00000019917	ADARB1	52	66.237	Equus_caballus
ENSPMAG00000006731	-	97	64.935	ENSELUG00000016573	adarb1a	53	64.467	Esox_lucius
ENSPMAG00000006731	-	98	65.296	ENSELUG00000012944	adarb1b	53	65.810	Esox_lucius
ENSPMAG00000006731	-	97	67.188	ENSFCAG00000009665	ADARB1	52	66.753	Felis_catus
ENSPMAG00000006731	-	99	67.448	ENSFALG00000013340	ADARB1	59	65.327	Ficedula_albicollis
ENSPMAG00000006731	-	97	65.625	ENSFDAG00000007146	ADARB1	52	64.796	Fukomys_damarensis
ENSPMAG00000006731	-	97	62.760	ENSFHEG00000015959	-	52	62.760	Fundulus_heteroclitus
ENSPMAG00000006731	-	99	65.375	ENSFHEG00000005765	adarb1b	57	65.544	Fundulus_heteroclitus
ENSPMAG00000006731	-	98	64.103	ENSGMOG00000002964	-	90	64.433	Gadus_morhua
ENSPMAG00000006731	-	97	68.783	ENSGALG00000007527	ADARB1	66	67.352	Gallus_gallus
ENSPMAG00000006731	-	98	65.803	ENSGAFG00000018552	adarb1b	53	65.544	Gambusia_affinis
ENSPMAG00000006731	-	98	64.541	ENSGACG00000015240	-	53	64.031	Gasterosteus_aculeatus
ENSPMAG00000006731	-	98	67.277	ENSGAGG00000013378	ADARB1	54	65.823	Gopherus_agassizii
ENSPMAG00000006731	-	97	66.406	ENSGGOG00000013244	ADARB1	52	65.979	Gorilla_gorilla
ENSPMAG00000006731	-	98	60.256	ENSHBUG00000023046	-	62	60.256	Haplochromis_burtoni
ENSPMAG00000006731	-	98	64.508	ENSHBUG00000004710	adarb1b	53	65.553	Haplochromis_burtoni
ENSPMAG00000006731	-	97	66.146	ENSHGLG00000005906	ADARB1	53	64.987	Heterocephalus_glaber_female
ENSPMAG00000006731	-	97	66.146	ENSHGLG00100006988	ADARB1	53	64.987	Heterocephalus_glaber_male
ENSPMAG00000006731	-	98	65.217	ENSHCOG00000009597	adarb1b	53	65.217	Hippocampus_comes
ENSPMAG00000006731	-	98	66.667	ENSIPUG00000008384	adarb1b	53	66.158	Ictalurus_punctatus
ENSPMAG00000006731	-	99	62.629	ENSIPUG00000008816	adarb1	53	62.629	Ictalurus_punctatus
ENSPMAG00000006731	-	99	64.885	ENSSTOG00000015792	ADARB1	53	64.885	Ictidomys_tridecemlineatus
ENSPMAG00000006731	-	98	64.691	ENSJJAG00000016847	Adarb1	56	64.175	Jaculus_jaculus
ENSPMAG00000006731	-	98	65.206	ENSKMAG00000018557	adarb1b	53	65.464	Kryptolebias_marmoratus
ENSPMAG00000006731	-	97	65.535	ENSKMAG00000010426	-	53	65.092	Kryptolebias_marmoratus
ENSPMAG00000006731	-	97	64.467	ENSLBEG00000017967	-	53	64.975	Labrus_bergylta
ENSPMAG00000006731	-	98	65.285	ENSLBEG00000026387	adarb1b	53	65.810	Labrus_bergylta
ENSPMAG00000006731	-	98	67.539	ENSLACG00000008270	ADARB1	53	67.866	Latimeria_chalumnae
ENSPMAG00000006731	-	98	66.929	ENSLOCG00000009051	adarb1b	53	66.495	Lepisosteus_oculatus
ENSPMAG00000006731	-	97	67.010	ENSLAFG00000007480	ADARB1	51	67.008	Loxodonta_africana
ENSPMAG00000006731	-	97	65.885	ENSMFAG00000011312	ADARB1	54	65.464	Macaca_fascicularis
ENSPMAG00000006731	-	97	65.885	ENSMMUG00000010695	ADARB1	52	65.464	Macaca_mulatta
ENSPMAG00000006731	-	97	65.885	ENSMNEG00000031543	ADARB1	52	65.464	Macaca_nemestrina
ENSPMAG00000006731	-	97	65.885	ENSMLEG00000033846	ADARB1	56	65.464	Mandrillus_leucophaeus
ENSPMAG00000006731	-	97	62.240	ENSMAMG00000000571	-	54	63.395	Mastacembelus_armatus
ENSPMAG00000006731	-	98	64.767	ENSMAMG00000013170	adarb1b	53	65.553	Mastacembelus_armatus
ENSPMAG00000006731	-	98	61.026	ENSMZEG00005021060	-	51	61.026	Maylandia_zebra
ENSPMAG00000006731	-	98	64.508	ENSMZEG00005017003	adarb1b	53	65.553	Maylandia_zebra
ENSPMAG00000006731	-	98	63.776	ENSMAUG00000009334	Adarb1	52	63.776	Mesocricetus_auratus
ENSPMAG00000006731	-	97	65.365	ENSMICG00000008433	ADARB1	53	63.980	Microcebus_murinus
ENSPMAG00000006731	-	98	64.267	ENSMOCG00000018324	Adarb1	52	63.776	Microtus_ochrogaster
ENSPMAG00000006731	-	98	65.195	ENSMMOG00000005423	adarb1b	55	65.464	Mola_mola
ENSPMAG00000006731	-	97	66.404	ENSMMOG00000006394	-	54	65.104	Mola_mola
ENSPMAG00000006731	-	99	64.175	ENSMALG00000022629	adarb1b	53	65.217	Monopterus_albus
ENSPMAG00000006731	-	98	64.267	MGP_CAROLIEiJ_G0015481	Adarb1	52	63.776	Mus_caroli
ENSPMAG00000006731	-	98	64.267	ENSMUSG00000020262	Adarb1	52	63.776	Mus_musculus
ENSPMAG00000006731	-	98	64.267	MGP_PahariEiJ_G0030894	Adarb1	52	63.776	Mus_pahari
ENSPMAG00000006731	-	98	64.267	MGP_SPRETEiJ_G0016294	Adarb1	52	63.776	Mus_spretus
ENSPMAG00000006731	-	98	66.579	ENSMPUG00000010296	ADARB1	52	66.495	Mustela_putorius_furo
ENSPMAG00000006731	-	98	67.352	ENSMLUG00000011328	ADARB1	52	67.352	Myotis_lucifugus
ENSPMAG00000006731	-	98	64.267	ENSNGAG00000021602	Adarb1	52	63.776	Nannospalax_galili
ENSPMAG00000006731	-	98	64.508	ENSNBRG00000015066	adarb1b	53	65.553	Neolamprologus_brichardi
ENSPMAG00000006731	-	98	60.769	ENSNBRG00000013437	-	54	60.769	Neolamprologus_brichardi
ENSPMAG00000006731	-	97	65.885	ENSNLEG00000002514	ADARB1	52	65.464	Nomascus_leucogenys
ENSPMAG00000006731	-	99	65.482	ENSMEUG00000009400	ADARB1	50	65.810	Notamacropus_eugenii
ENSPMAG00000006731	-	97	65.974	ENSODEG00000014508	ADARB1	51	65.051	Octodon_degus
ENSPMAG00000006731	-	98	61.538	ENSONIG00000007354	-	51	61.538	Oreochromis_niloticus
ENSPMAG00000006731	-	97	65.879	ENSORLG00000018106	adarb1b	52	66.316	Oryzias_latipes
ENSPMAG00000006731	-	97	48.533	ENSORLG00000020682	-	51	48.533	Oryzias_latipes
ENSPMAG00000006731	-	97	65.879	ENSORLG00020012709	adarb1b	52	65.625	Oryzias_latipes_hni
ENSPMAG00000006731	-	97	48.148	ENSORLG00020013949	-	50	48.148	Oryzias_latipes_hni
ENSPMAG00000006731	-	99	54.922	ENSOMEG00000010969	-	51	55.959	Oryzias_melastigma
ENSPMAG00000006731	-	97	66.142	ENSOMEG00000010493	adarb1b	52	65.617	Oryzias_melastigma
ENSPMAG00000006731	-	98	65.385	ENSOGAG00000017167	ADARB1	52	65.140	Otolemur_garnettii
ENSPMAG00000006731	-	97	66.406	ENSPPAG00000027139	ADARB1	52	65.979	Pan_paniscus
ENSPMAG00000006731	-	97	67.188	ENSPPRG00000012281	ADARB1	52	66.753	Panthera_pardus
ENSPMAG00000006731	-	97	66.406	ENSPTRG00000013997	ADARB1	52	65.979	Pan_troglodytes
ENSPMAG00000006731	-	97	65.885	ENSPANG00000020871	ADARB1	62	65.464	Papio_anubis
ENSPMAG00000006731	-	98	62.895	ENSPKIG00000014295	adarb1b	53	63.874	Paramormyrops_kingsleyae
ENSPMAG00000006731	-	98	65.897	ENSPKIG00000010029	adarb1b	53	65.641	Paramormyrops_kingsleyae
ENSPMAG00000006731	-	98	66.838	ENSPSIG00000006201	ADARB1	53	66.753	Pelodiscus_sinensis
ENSPMAG00000006731	-	98	64.267	ENSPEMG00000022360	Adarb1	52	63.776	Peromyscus_maniculatus_bairdii
ENSPMAG00000006731	-	97	66.494	ENSPCIG00000024187	ADARB1	52	66.067	Phascolarctos_cinereus
ENSPMAG00000006731	-	98	65.803	ENSPFOG00000002576	adarb1b	53	65.803	Poecilia_formosa
ENSPMAG00000006731	-	97	62.051	ENSPFOG00000002564	-	52	62.051	Poecilia_formosa
ENSPMAG00000006731	-	72	56.184	ENSPLAG00000011630	-	78	57.480	Poecilia_latipinna
ENSPMAG00000006731	-	98	66.142	ENSPLAG00000003525	adarb1b	51	65.879	Poecilia_latipinna
ENSPMAG00000006731	-	98	66.142	ENSPMEG00000014365	adarb1b	53	65.803	Poecilia_mexicana
ENSPMAG00000006731	-	98	65.803	ENSPREG00000016600	adarb1b	53	65.803	Poecilia_reticulata
ENSPMAG00000006731	-	97	62.663	ENSPREG00000018254	-	50	63.255	Poecilia_reticulata
ENSPMAG00000006731	-	97	66.406	ENSPPYG00000011514	ADARB1	52	65.979	Pongo_abelii
ENSPMAG00000006731	-	98	66.067	ENSPCOG00000020406	ADARB1	52	65.306	Propithecus_coquereli
ENSPMAG00000006731	-	97	64.491	ENSPVAG00000012197	ADARB1	58	63.706	Pteropus_vampyrus
ENSPMAG00000006731	-	98	61.026	ENSPNYG00000016509	-	53	61.026	Pundamilia_nyererei
ENSPMAG00000006731	-	98	64.508	ENSPNYG00000000542	adarb1b	53	65.553	Pundamilia_nyererei
ENSPMAG00000006731	-	99	63.566	ENSPNAG00000022697	adarb1a	57	63.472	Pygocentrus_nattereri
ENSPMAG00000006731	-	97	66.234	ENSPNAG00000013623	adarb1b	53	66.324	Pygocentrus_nattereri
ENSPMAG00000006731	-	98	64.267	ENSRNOG00000001227	Adarb1	53	63.776	Rattus_norvegicus
ENSPMAG00000006731	-	97	66.146	ENSRBIG00000033033	ADARB1	51	65.722	Rhinopithecus_bieti
ENSPMAG00000006731	-	97	66.146	ENSRROG00000042856	ADARB1	53	67.143	Rhinopithecus_roxellana
ENSPMAG00000006731	-	98	65.561	ENSSBOG00000021021	ADARB1	63	65.561	Saimiri_boliviensis_boliviensis
ENSPMAG00000006731	-	98	64.737	ENSSFOG00015008633	adarb1b	51	64.737	Scleropages_formosus
ENSPMAG00000006731	-	98	66.062	ENSSMAG00000004206	adarb1b	56	65.810	Scophthalmus_maximus
ENSPMAG00000006731	-	97	64.136	ENSSMAG00000009423	-	53	64.136	Scophthalmus_maximus
ENSPMAG00000006731	-	98	65.707	ENSSDUG00000010164	adarb1b	53	65.553	Seriola_dumerili
ENSPMAG00000006731	-	98	65.707	ENSSLDG00000021316	adarb1b	53	65.553	Seriola_lalandi_dorsalis
ENSPMAG00000006731	-	97	65.714	ENSSLDG00000013681	-	54	65.104	Seriola_lalandi_dorsalis
ENSPMAG00000006731	-	97	64.948	ENSSPUG00000014163	ADARB1	53	63.819	Sphenodon_punctatus
ENSPMAG00000006731	-	98	64.767	ENSSPAG00000005613	adarb1b	53	65.553	Stegastes_partitus
ENSPMAG00000006731	-	97	67.368	ENSSPAG00000003299	-	52	66.146	Stegastes_partitus
ENSPMAG00000006731	-	97	65.365	ENSSSCG00000012089	ADARB1	52	64.975	Sus_scrofa
ENSPMAG00000006731	-	98	67.539	ENSTGUG00000011159	ADARB1	53	66.076	Taeniopygia_guttata
ENSPMAG00000006731	-	97	66.313	ENSTRUG00000006823	adarb1b	52	65.885	Takifugu_rubripes
ENSPMAG00000006731	-	97	64.844	ENSTRUG00000006297	-	53	64.583	Takifugu_rubripes
ENSPMAG00000006731	-	98	63.613	ENSTNIG00000008894	adarb1b	50	64.286	Tetraodon_nigroviridis
ENSPMAG00000006731	-	97	65.116	ENSTNIG00000014498	-	53	64.508	Tetraodon_nigroviridis
ENSPMAG00000006731	-	97	61.198	ENSTBEG00000014798	ADARB1	51	61.198	Tupaia_belangeri
ENSPMAG00000006731	-	97	66.146	ENSTTRG00000002681	ADARB1	52	65.385	Tursiops_truncatus
ENSPMAG00000006731	-	98	64.781	ENSUAMG00000005024	ADARB1	57	65.810	Ursus_americanus
ENSPMAG00000006731	-	98	65.553	ENSUMAG00000025411	ADARB1	52	65.553	Ursus_maritimus
ENSPMAG00000006731	-	98	66.324	ENSVVUG00000023911	ADARB1	52	66.067	Vulpes_vulpes
ENSPMAG00000006731	-	99	67.885	ENSXETG00000018692	adarb1	51	67.010	Xenopus_tropicalis
ENSPMAG00000006731	-	97	63.255	ENSXCOG00000020590	-	52	62.730	Xiphophorus_couchianus
ENSPMAG00000006731	-	98	65.544	ENSXCOG00000014535	adarb1b	53	65.544	Xiphophorus_couchianus
ENSPMAG00000006731	-	97	63.255	ENSXMAG00000018829	-	50	62.730	Xiphophorus_maculatus
ENSPMAG00000006731	-	98	65.544	ENSXMAG00000002053	adarb1b	53	65.544	Xiphophorus_maculatus