EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMAG00000006835 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 7037 bases
Position: chrGL478650:148856-155892
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000007542	MMR_HSR1	PF01926.23	6.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000007576	-	705	-	ENSPMAP00000007542	234 (aa)	-	S4RQQ6

Gene Model

Click here to download ENSPMAG00000006835's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000006835's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMAG00000006835	-	71	33.533	ENSPMAG00000007867	rab5c	73	32.903
ENSPMAG00000006835	-	62	34.211	ENSPMAG00000005048	MRAS	80	31.953
ENSPMAG00000006835	-	63	30.201	ENSPMAG00000004548	hrasb	77	30.201
ENSPMAG00000006835	-	76	31.461	ENSPMAG00000000008	rab5c	76	30.723
ENSPMAG00000006835	-	68	35.000	ENSPMAG00000000547	rheb	80	34.228
ENSPMAG00000006835	-	74	37.500	ENSPMAG00000004657	rab36	68	35.152
ENSPMAG00000006835	-	70	34.545	ENSPMAG00000009335	-	75	32.903
ENSPMAG00000006835	-	71	33.929	ENSPMAG00000006171	-	74	33.333
ENSPMAG00000006835	-	68	31.176	ENSPMAG00000005537	rab27a	77	31.176
ENSPMAG00000006835	-	68	35.542	ENSPMAG00000007247	rab33ba	64	35.065
ENSPMAG00000006835	-	71	34.911	ENSPMAG00000008764	RAB2B	85	34.395
ENSPMAG00000006835	-	72	34.320	ENSPMAG00000002006	-	73	33.758
ENSPMAG00000006835	-	88	32.692	ENSPMAG00000001801	rab1ba	88	32.979
ENSPMAG00000006835	-	62	30.872	ENSPMAG00000000465	MRAS	74	30.323
ENSPMAG00000006835	-	71	33.918	ENSPMAG00000001399	rab5c	76	33.333
ENSPMAG00000006835	-	71	34.911	ENSPMAG00000005322	rab18b	73	34.641
ENSPMAG00000006835	-	79	36.898	ENSPMAG00000006105	rab30	88	36.898

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000006835	-	99	68.220	ENSG00000112210	RAB23	99	68.220	Homo_sapiens
ENSPMAG00000006835	-	100	67.660	ENSAPOG00000008892	rab23	100	67.660	Acanthochromis_polyacanthus
ENSPMAG00000006835	-	99	68.220	ENSAMEG00000006825	RAB23	99	68.220	Ailuropoda_melanoleuca
ENSPMAG00000006835	-	100	60.684	ENSACIG00000020496	rab23	100	60.684	Amphilophus_citrinellus
ENSPMAG00000006835	-	100	67.660	ENSAOCG00000004234	rab23	100	67.660	Amphiprion_ocellaris
ENSPMAG00000006835	-	100	67.660	ENSAPEG00000019758	rab23	100	67.660	Amphiprion_percula
ENSPMAG00000006835	-	100	67.234	ENSATEG00000020913	rab23	100	67.234	Anabas_testudineus
ENSPMAG00000006835	-	75	74.857	ENSAPLG00000003715	RAB23	99	74.857	Anas_platyrhynchos
ENSPMAG00000006835	-	99	65.401	ENSACAG00000006656	RAB23	99	65.401	Anolis_carolinensis
ENSPMAG00000006835	-	99	68.644	ENSANAG00000027052	-	99	68.644	Aotus_nancymaae
ENSPMAG00000006835	-	100	67.660	ENSACLG00000002819	rab23	100	67.660	Astatotilapia_calliptera
ENSPMAG00000006835	-	100	68.354	ENSAMXG00000014960	rab23	100	68.354	Astyanax_mexicanus
ENSPMAG00000006835	-	99	66.946	ENSBTAG00000005362	RAB23	99	66.946	Bos_taurus
ENSPMAG00000006835	-	99	68.644	ENSCJAG00000010247	RAB23	99	68.644	Callithrix_jacchus
ENSPMAG00000006835	-	99	68.201	ENSCAFG00000002459	RAB23	99	68.201	Canis_familiaris
ENSPMAG00000006835	-	99	68.201	ENSCAFG00020015900	RAB23	99	68.201	Canis_lupus_dingo
ENSPMAG00000006835	-	99	66.946	ENSCHIG00000009815	RAB23	99	66.946	Capra_hircus
ENSPMAG00000006835	-	100	68.354	ENSTSYG00000029126	RAB23	100	68.354	Carlito_syrichta
ENSPMAG00000006835	-	99	68.511	ENSCPOG00000030218	RAB23	99	68.511	Cavia_porcellus
ENSPMAG00000006835	-	99	68.644	ENSCCAG00000020364	RAB23	99	68.644	Cebus_capucinus
ENSPMAG00000006835	-	99	68.644	ENSCATG00000027876	RAB23	99	68.644	Cercocebus_atys
ENSPMAG00000006835	-	99	66.946	ENSCLAG00000000797	RAB23	99	66.946	Chinchilla_lanigera
ENSPMAG00000006835	-	99	67.797	ENSCSAG00000013438	RAB23	99	67.797	Chlorocebus_sabaeus
ENSPMAG00000006835	-	99	67.373	ENSCPBG00000022640	RAB23	99	67.373	Chrysemys_picta_bellii
ENSPMAG00000006835	-	100	57.202	ENSCING00000001155	-	99	58.333	Ciona_intestinalis
ENSPMAG00000006835	-	99	56.379	ENSCSAVG00000001356	-	99	56.379	Ciona_savignyi
ENSPMAG00000006835	-	99	68.220	ENSCANG00000031065	RAB23	99	68.220	Colobus_angolensis_palliatus
ENSPMAG00000006835	-	99	69.038	ENSCGRG00001008994	Rab23	99	69.038	Cricetulus_griseus_chok1gshd
ENSPMAG00000006835	-	99	68.067	ENSCGRG00000013630	Rab23	99	68.067	Cricetulus_griseus_crigri
ENSPMAG00000006835	-	100	61.111	ENSCSEG00000010565	rab23	100	61.111	Cynoglossus_semilaevis
ENSPMAG00000006835	-	100	67.660	ENSCVAG00000020501	rab23	100	67.660	Cyprinodon_variegatus
ENSPMAG00000006835	-	100	69.198	ENSDARG00000004151	rab23	100	69.198	Danio_rerio
ENSPMAG00000006835	-	99	66.809	ENSDNOG00000015501	RAB23	99	66.809	Dasypus_novemcinctus
ENSPMAG00000006835	-	100	68.619	ENSDORG00000028344	Rab23	100	68.619	Dipodomys_ordii
ENSPMAG00000006835	-	100	55.187	FBgn0037364	Rab23	90	55.187	Drosophila_melanogaster
ENSPMAG00000006835	-	98	62.232	ENSEBUG00000010861	-	93	62.232	Eptatretus_burgeri
ENSPMAG00000006835	-	99	68.644	ENSEASG00005003529	RAB23	99	68.644	Equus_asinus_asinus
ENSPMAG00000006835	-	99	69.068	ENSECAG00000013427	RAB23	99	69.068	Equus_caballus
ENSPMAG00000006835	-	100	68.333	ENSEEUG00000015045	RAB23	100	68.333	Erinaceus_europaeus
ENSPMAG00000006835	-	100	68.936	ENSELUG00000020788	rab23	100	68.936	Esox_lucius
ENSPMAG00000006835	-	99	68.220	ENSFCAG00000044358	RAB23	99	68.220	Felis_catus
ENSPMAG00000006835	-	99	67.797	ENSFALG00000001708	RAB23	99	67.797	Ficedula_albicollis
ENSPMAG00000006835	-	99	66.525	ENSFDAG00000014834	RAB23	99	66.525	Fukomys_damarensis
ENSPMAG00000006835	-	100	68.511	ENSFHEG00000023069	rab23	100	68.511	Fundulus_heteroclitus
ENSPMAG00000006835	-	100	67.660	ENSGMOG00000005102	rab23	100	67.660	Gadus_morhua
ENSPMAG00000006835	-	99	67.797	ENSGALG00000016279	RAB23	99	67.797	Gallus_gallus
ENSPMAG00000006835	-	100	67.234	ENSGAFG00000007684	rab23	100	67.234	Gambusia_affinis
ENSPMAG00000006835	-	100	68.936	ENSGACG00000006151	rab23	100	68.936	Gasterosteus_aculeatus
ENSPMAG00000006835	-	99	67.797	ENSGAGG00000012709	RAB23	99	67.797	Gopherus_agassizii
ENSPMAG00000006835	-	100	61.111	ENSHBUG00000007966	rab23	100	61.111	Haplochromis_burtoni
ENSPMAG00000006835	-	99	56.250	ENSHGLG00000009371	-	99	55.417	Heterocephalus_glaber_female
ENSPMAG00000006835	-	99	66.949	ENSHGLG00000013030	-	99	67.373	Heterocephalus_glaber_female
ENSPMAG00000006835	-	99	66.949	ENSHGLG00100005945	-	99	67.373	Heterocephalus_glaber_male
ENSPMAG00000006835	-	99	56.250	ENSHGLG00100017177	-	99	55.417	Heterocephalus_glaber_male
ENSPMAG00000006835	-	100	59.402	ENSHCOG00000013919	rab23	100	59.402	Hippocampus_comes
ENSPMAG00000006835	-	100	61.441	ENSIPUG00000016494	rab23	100	61.441	Ictalurus_punctatus
ENSPMAG00000006835	-	99	67.797	ENSSTOG00000010962	RAB23	99	67.797	Ictidomys_tridecemlineatus
ENSPMAG00000006835	-	99	69.038	ENSJJAG00000020094	Rab23	99	69.038	Jaculus_jaculus
ENSPMAG00000006835	-	100	67.234	ENSKMAG00000018270	rab23	100	67.234	Kryptolebias_marmoratus
ENSPMAG00000006835	-	100	66.809	ENSLBEG00000013176	rab23	100	66.809	Labrus_bergylta
ENSPMAG00000006835	-	100	67.511	ENSLACG00000004025	RAB23	100	67.511	Latimeria_chalumnae
ENSPMAG00000006835	-	100	67.500	ENSLOCG00000016999	rab23	100	67.500	Lepisosteus_oculatus
ENSPMAG00000006835	-	99	68.220	ENSLAFG00000007209	RAB23	99	68.220	Loxodonta_africana
ENSPMAG00000006835	-	99	68.644	ENSMFAG00000032369	RAB23	99	68.644	Macaca_fascicularis
ENSPMAG00000006835	-	99	68.644	ENSMMUG00000018003	RAB23	99	68.644	Macaca_mulatta
ENSPMAG00000006835	-	99	68.644	ENSMNEG00000037012	RAB23	99	68.644	Macaca_nemestrina
ENSPMAG00000006835	-	99	68.644	ENSMLEG00000042429	RAB23	99	68.644	Mandrillus_leucophaeus
ENSPMAG00000006835	-	100	67.234	ENSMAMG00000015456	rab23	100	67.234	Mastacembelus_armatus
ENSPMAG00000006835	-	100	67.660	ENSMZEG00005005441	rab23	100	67.660	Maylandia_zebra
ENSPMAG00000006835	-	99	68.220	ENSMGAG00000013882	RAB23	99	68.220	Meleagris_gallopavo
ENSPMAG00000006835	-	99	68.644	ENSMICG00000014037	RAB23	99	68.644	Microcebus_murinus
ENSPMAG00000006835	-	99	69.038	ENSMOCG00000000444	Rab23	99	69.038	Microtus_ochrogaster
ENSPMAG00000006835	-	100	61.111	ENSMMOG00000007703	rab23	100	61.111	Mola_mola
ENSPMAG00000006835	-	99	68.644	ENSMODG00000018720	RAB23	99	68.644	Monodelphis_domestica
ENSPMAG00000006835	-	100	67.234	ENSMALG00000002136	rab23	100	67.234	Monopterus_albus
ENSPMAG00000006835	-	99	66.525	MGP_CAROLIEiJ_G0014015	Rab23	99	66.525	Mus_caroli
ENSPMAG00000006835	-	99	66.102	ENSMUSG00000004768	Rab23	99	66.102	Mus_musculus
ENSPMAG00000006835	-	99	65.678	MGP_PahariEiJ_G0027261	Rab23	99	65.678	Mus_pahari
ENSPMAG00000006835	-	99	66.102	MGP_SPRETEiJ_G0014820	Rab23	99	66.102	Mus_spretus
ENSPMAG00000006835	-	99	63.333	ENSMPUG00000002642	RAB23	99	63.333	Mustela_putorius_furo
ENSPMAG00000006835	-	99	68.644	ENSMLUG00000004058	RAB23	99	68.644	Myotis_lucifugus
ENSPMAG00000006835	-	99	68.201	ENSNGAG00000018038	Rab23	99	68.201	Nannospalax_galili
ENSPMAG00000006835	-	100	67.660	ENSNBRG00000013691	rab23	100	67.660	Neolamprologus_brichardi
ENSPMAG00000006835	-	99	68.220	ENSNLEG00000027830	RAB23	99	68.220	Nomascus_leucogenys
ENSPMAG00000006835	-	99	67.797	ENSODEG00000016056	RAB23	99	67.797	Octodon_degus
ENSPMAG00000006835	-	100	66.949	ENSONIG00000009749	rab23	100	66.949	Oreochromis_niloticus
ENSPMAG00000006835	-	99	69.492	ENSOANG00000001398	RAB23	99	69.492	Ornithorhynchus_anatinus
ENSPMAG00000006835	-	99	69.068	ENSOCUG00000004816	RAB23	99	69.068	Oryctolagus_cuniculus
ENSPMAG00000006835	-	100	66.383	ENSORLG00000010115	rab23	100	66.383	Oryzias_latipes
ENSPMAG00000006835	-	100	66.383	ENSORLG00020020220	rab23	100	66.383	Oryzias_latipes_hni
ENSPMAG00000006835	-	100	67.234	ENSORLG00015004033	rab23	100	67.234	Oryzias_latipes_hsok
ENSPMAG00000006835	-	100	66.809	ENSOMEG00000001706	rab23	100	66.809	Oryzias_melastigma
ENSPMAG00000006835	-	99	68.619	ENSOGAG00000005675	RAB23	99	68.619	Otolemur_garnettii
ENSPMAG00000006835	-	99	66.946	ENSOARG00000005749	RAB23	99	66.946	Ovis_aries
ENSPMAG00000006835	-	99	68.644	ENSPPAG00000010023	RAB23	99	68.644	Pan_paniscus
ENSPMAG00000006835	-	99	67.797	ENSPPRG00000012453	RAB23	99	67.797	Panthera_pardus
ENSPMAG00000006835	-	99	68.220	ENSPTIG00000009435	RAB23	99	68.220	Panthera_tigris_altaica
ENSPMAG00000006835	-	99	68.220	ENSPTRG00000043341	RAB23	99	68.220	Pan_troglodytes
ENSPMAG00000006835	-	99	68.644	ENSPANG00000017772	RAB23	99	68.644	Papio_anubis
ENSPMAG00000006835	-	82	72.539	ENSPKIG00000024310	rab23	95	72.539	Paramormyrops_kingsleyae
ENSPMAG00000006835	-	99	66.949	ENSPSIG00000015579	RAB23	99	66.949	Pelodiscus_sinensis
ENSPMAG00000006835	-	100	60.684	ENSPMGG00000008577	rab23	100	60.684	Periophthalmus_magnuspinnatus
ENSPMAG00000006835	-	99	69.456	ENSPEMG00000023271	Rab23	99	69.456	Peromyscus_maniculatus_bairdii
ENSPMAG00000006835	-	99	69.068	ENSPCIG00000007267	RAB23	99	69.068	Phascolarctos_cinereus
ENSPMAG00000006835	-	100	68.085	ENSPFOG00000011493	rab23	100	68.085	Poecilia_formosa
ENSPMAG00000006835	-	100	67.660	ENSPLAG00000011697	rab23	100	67.660	Poecilia_latipinna
ENSPMAG00000006835	-	100	67.660	ENSPMEG00000017300	rab23	100	67.660	Poecilia_mexicana
ENSPMAG00000006835	-	100	60.256	ENSPREG00000022509	rab23	100	60.256	Poecilia_reticulata
ENSPMAG00000006835	-	99	68.220	ENSPPYG00000016739	RAB23	99	68.220	Pongo_abelii
ENSPMAG00000006835	-	99	68.644	ENSPCOG00000028471	RAB23	99	68.644	Propithecus_coquereli
ENSPMAG00000006835	-	99	61.925	ENSPVAG00000017693	RAB23	99	61.925	Pteropus_vampyrus
ENSPMAG00000006835	-	100	67.660	ENSPNYG00000019639	rab23	100	67.660	Pundamilia_nyererei
ENSPMAG00000006835	-	100	68.776	ENSPNAG00000024728	rab23	100	68.776	Pygocentrus_nattereri
ENSPMAG00000006835	-	99	66.525	ENSRNOG00000012629	Rab23	99	66.525	Rattus_norvegicus
ENSPMAG00000006835	-	99	64.315	ENSRBIG00000030547	RAB23	99	64.315	Rhinopithecus_bieti
ENSPMAG00000006835	-	99	68.644	ENSRROG00000035920	RAB23	99	68.644	Rhinopithecus_roxellana
ENSPMAG00000006835	-	99	68.619	ENSSBOG00000033237	RAB23	99	68.619	Saimiri_boliviensis_boliviensis
ENSPMAG00000006835	-	99	68.644	ENSSHAG00000006379	RAB23	99	68.644	Sarcophilus_harrisii
ENSPMAG00000006835	-	100	70.464	ENSSFOG00015012604	rab23	100	70.464	Scleropages_formosus
ENSPMAG00000006835	-	100	68.511	ENSSMAG00000006341	rab23	100	68.511	Scophthalmus_maximus
ENSPMAG00000006835	-	100	67.234	ENSSDUG00000023508	rab23	100	67.234	Seriola_dumerili
ENSPMAG00000006835	-	100	67.234	ENSSLDG00000000287	rab23	100	67.234	Seriola_lalandi_dorsalis
ENSPMAG00000006835	-	99	68.619	ENSSARG00000013689	RAB23	99	68.619	Sorex_araneus
ENSPMAG00000006835	-	99	67.373	ENSSPUG00000006274	RAB23	99	67.373	Sphenodon_punctatus
ENSPMAG00000006835	-	100	67.660	ENSSPAG00000010373	rab23	100	67.660	Stegastes_partitus
ENSPMAG00000006835	-	99	68.220	ENSSSCG00000029539	RAB23	99	68.220	Sus_scrofa
ENSPMAG00000006835	-	99	67.373	ENSTGUG00000012794	RAB23	99	67.373	Taeniopygia_guttata
ENSPMAG00000006835	-	100	68.376	ENSTRUG00000015697	rab23	100	68.376	Takifugu_rubripes
ENSPMAG00000006835	-	100	67.521	ENSTNIG00000016575	rab23	100	67.521	Tetraodon_nigroviridis
ENSPMAG00000006835	-	99	68.220	ENSUAMG00000013367	RAB23	99	68.220	Ursus_americanus
ENSPMAG00000006835	-	99	68.220	ENSUMAG00000018629	RAB23	99	68.220	Ursus_maritimus
ENSPMAG00000006835	-	77	55.801	ENSVPAG00000006805	RAB23	95	55.801	Vicugna_pacos
ENSPMAG00000006835	-	99	68.201	ENSVVUG00000008535	RAB23	99	68.201	Vulpes_vulpes
ENSPMAG00000006835	-	100	63.445	ENSXETG00000004449	rab23	100	63.445	Xenopus_tropicalis
ENSPMAG00000006835	-	100	67.660	ENSXCOG00000011864	rab23	100	67.660	Xiphophorus_couchianus
ENSPMAG00000006835	-	100	67.660	ENSXMAG00000009387	rab23	100	67.660	Xiphophorus_maculatus