EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSPMAG00000006949 (Gene tree)
Gene ID
-
Gene Symbol
lsm6
Alias
-
Full Name
LSM6 homolog%2C U6 small nuclear RNA and mRNA degradation associated
Gene Type
protein_coding
Species
Petromyzon_marinus
Status
putative
Strand
Plus strand
Length
4792 bases
Position
chrGL476395:427129-431920
Accession
ZDB-GENE-040625-50
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPMAP00000007662LSMPF01423.225.3e-2011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPMAT00000007696-646-ENSPMAP0000000766280 (aa)-S4RR26
Gene Model
Click here to download ENSPMAG00000006949's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000006949's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPMAG00000006949lsm610098.750ENSG00000164167LSM610098.750Homo_sapiens
ENSPMAG00000006949lsm610095.000ENSAPOG00000019832lsm610095.000Acanthochromis_polyacanthus
ENSPMAG00000006949lsm610098.750ENSAMEG00000016671LSM610098.750Ailuropoda_melanoleuca
ENSPMAG00000006949lsm610095.000ENSACIG00000016711lsm610095.000Amphilophus_citrinellus
ENSPMAG00000006949lsm610095.000ENSAOCG00000002110lsm65295.000Amphiprion_ocellaris
ENSPMAG00000006949lsm610095.000ENSAPEG00000023992lsm610095.000Amphiprion_percula
ENSPMAG00000006949lsm610095.000ENSATEG00000012610lsm610095.000Anabas_testudineus
ENSPMAG00000006949lsm69698.701ENSAPLG00000012594LSM69998.701Anas_platyrhynchos
ENSPMAG00000006949lsm610098.750ENSACAG00000004004LSM610098.750Anolis_carolinensis
ENSPMAG00000006949lsm610098.750ENSANAG00000030568-10098.750Aotus_nancymaae
ENSPMAG00000006949lsm610085.000ENSANAG00000021839-10085.000Aotus_nancymaae
ENSPMAG00000006949lsm610095.000ENSACLG00000025621lsm610095.000Astatotilapia_calliptera
ENSPMAG00000006949lsm610095.000ENSAMXG00000038738lsm610095.000Astyanax_mexicanus
ENSPMAG00000006949lsm610092.500ENSBTAG00000052085-10092.500Bos_taurus
ENSPMAG00000006949lsm610098.750ENSBTAG00000014060LSM610098.750Bos_taurus
ENSPMAG00000006949lsm69481.333WBGene00003080lsm-69781.333Caenorhabditis_elegans
ENSPMAG00000006949lsm610098.750ENSCJAG00000002482LSM610098.750Callithrix_jacchus
ENSPMAG00000006949lsm610098.750ENSCAFG00000007738LSM610098.750Canis_familiaris
ENSPMAG00000006949lsm610098.750ENSCAFG00020025902LSM610098.750Canis_lupus_dingo
ENSPMAG00000006949lsm610098.750ENSCHIG00000010334-10098.750Capra_hircus
ENSPMAG00000006949lsm689100.000ENSCHIG00000012864-100100.000Capra_hircus
ENSPMAG00000006949lsm610082.500ENSCHIG00000024198-9582.500Capra_hircus
ENSPMAG00000006949lsm68092.188ENSTSYG00000012759-8492.188Carlito_syrichta
ENSPMAG00000006949lsm610098.750ENSTSYG00000026972LSM610098.750Carlito_syrichta
ENSPMAG00000006949lsm610098.750ENSCAPG00000008104LSM610098.750Cavia_aperea
ENSPMAG00000006949lsm68196.923ENSCAPG00000011179-10096.923Cavia_aperea
ENSPMAG00000006949lsm610098.750ENSCPOG00000032655LSM610098.750Cavia_porcellus
ENSPMAG00000006949lsm69998.734ENSCCAG00000020665-9998.734Cebus_capucinus
ENSPMAG00000006949lsm610098.750ENSCCAG00000036437LSM610098.750Cebus_capucinus
ENSPMAG00000006949lsm610071.250ENSCATG00000038799-10071.250Cercocebus_atys
ENSPMAG00000006949lsm610098.750ENSCATG00000002770-10098.750Cercocebus_atys
ENSPMAG00000006949lsm68980.282ENSCLAG00000005685-10080.282Chinchilla_lanigera
ENSPMAG00000006949lsm610098.750ENSCLAG00000005495LSM610098.750Chinchilla_lanigera
ENSPMAG00000006949lsm610098.750ENSCSAG00000003421LSM610098.750Chlorocebus_sabaeus
ENSPMAG00000006949lsm610077.500ENSCHOG00000003420LSM610077.500Choloepus_hoffmanni
ENSPMAG00000006949lsm610098.750ENSCPBG00000027472LSM68498.750Chrysemys_picta_bellii
ENSPMAG00000006949lsm69596.053ENSCING00000019152-9396.053Ciona_intestinalis
ENSPMAG00000006949lsm69597.368ENSCSAVG00000002065-9397.368Ciona_savignyi
ENSPMAG00000006949lsm610098.750ENSCANG00000041263-10098.750Colobus_angolensis_palliatus
ENSPMAG00000006949lsm610098.750ENSCANG00000006849-10098.750Colobus_angolensis_palliatus
ENSPMAG00000006949lsm610070.000ENSCANG00000035214-10070.000Colobus_angolensis_palliatus
ENSPMAG00000006949lsm610098.750ENSCGRG00001017142Lsm610098.750Cricetulus_griseus_chok1gshd
ENSPMAG00000006949lsm610098.750ENSCGRG00000008320Lsm610098.750Cricetulus_griseus_crigri
ENSPMAG00000006949lsm610095.000ENSCSEG00000000423lsm610095.000Cynoglossus_semilaevis
ENSPMAG00000006949lsm610095.000ENSCVAG00000001592lsm610095.000Cyprinodon_variegatus
ENSPMAG00000006949lsm610095.000ENSDARG00000036995lsm610095.000Danio_rerio
ENSPMAG00000006949lsm686100.000ENSDNOG00000040186-74100.000Dasypus_novemcinctus
ENSPMAG00000006949lsm610097.500ENSDNOG00000044848-10097.500Dasypus_novemcinctus
ENSPMAG00000006949lsm610098.750ENSDORG00000000933Lsm610098.750Dipodomys_ordii
ENSPMAG00000006949lsm69685.714FBgn0034564CG93449785.714Drosophila_melanogaster
ENSPMAG00000006949lsm66097.917ENSETEG00000013098LSM610097.917Echinops_telfairi
ENSPMAG00000006949lsm610098.750ENSEBUG00000017073lsm610098.750Eptatretus_burgeri
ENSPMAG00000006949lsm686100.000ENSEASG00005001533LSM672100.000Equus_asinus_asinus
ENSPMAG00000006949lsm610098.750ENSECAG00000021036LSM610098.750Equus_caballus
ENSPMAG00000006949lsm69970.886ENSEEUG00000002101LSM610070.886Erinaceus_europaeus
ENSPMAG00000006949lsm610095.000ENSELUG00000014301LSM610095.000Esox_lucius
ENSPMAG00000006949lsm610098.750ENSFCAG00000003047LSM610098.750Felis_catus
ENSPMAG00000006949lsm610098.750ENSFALG00000005509LSM69298.750Ficedula_albicollis
ENSPMAG00000006949lsm610087.500ENSFDAG00000019073-10087.500Fukomys_damarensis
ENSPMAG00000006949lsm610098.750ENSFDAG00000020913-10098.750Fukomys_damarensis
ENSPMAG00000006949lsm610095.000ENSFHEG00000007948lsm610095.000Fundulus_heteroclitus
ENSPMAG00000006949lsm610095.000ENSGMOG00000015550lsm610095.000Gadus_morhua
ENSPMAG00000006949lsm610098.750ENSGALG00000009985LSM610098.750Gallus_gallus
ENSPMAG00000006949lsm610095.000ENSGAFG00000017763lsm610095.000Gambusia_affinis
ENSPMAG00000006949lsm69996.203ENSGACG00000017223lsm69996.203Gasterosteus_aculeatus
ENSPMAG00000006949lsm610098.750ENSGAGG00000020980LSM610098.750Gopherus_agassizii
ENSPMAG00000006949lsm610098.750ENSGGOG00000001310LSM610098.750Gorilla_gorilla
ENSPMAG00000006949lsm610095.000ENSHBUG00000008618lsm610095.000Haplochromis_burtoni
ENSPMAG00000006949lsm610098.750ENSHGLG00000000205LSM610098.750Heterocephalus_glaber_female
ENSPMAG00000006949lsm610098.750ENSHGLG00100014341LSM610098.750Heterocephalus_glaber_male
ENSPMAG00000006949lsm610096.250ENSHCOG00000005591lsm610096.250Hippocampus_comes
ENSPMAG00000006949lsm610093.750ENSIPUG00000004508lsm610093.750Ictalurus_punctatus
ENSPMAG00000006949lsm610098.750ENSSTOG00000002678LSM610098.750Ictidomys_tridecemlineatus
ENSPMAG00000006949lsm69677.922ENSJJAG00000016942-9777.922Jaculus_jaculus
ENSPMAG00000006949lsm610088.750ENSJJAG00000011211-10088.750Jaculus_jaculus
ENSPMAG00000006949lsm610098.750ENSJJAG00000013845-10098.750Jaculus_jaculus
ENSPMAG00000006949lsm610095.000ENSKMAG00000004105lsm610095.000Kryptolebias_marmoratus
ENSPMAG00000006949lsm610095.000ENSLBEG00000018441lsm610095.000Labrus_bergylta
ENSPMAG00000006949lsm610098.750ENSLACG00000006937LSM610098.750Latimeria_chalumnae
ENSPMAG00000006949lsm610095.000ENSLOCG00000008852lsm610095.000Lepisosteus_oculatus
ENSPMAG00000006949lsm610093.750ENSLOCG00000017683-10093.750Lepisosteus_oculatus
ENSPMAG00000006949lsm610098.750ENSLAFG00000001952LSM610098.750Loxodonta_africana
ENSPMAG00000006949lsm610098.750ENSMFAG00000033073LSM610098.750Macaca_fascicularis
ENSPMAG00000006949lsm610072.500ENSMNEG00000040412-10072.500Macaca_nemestrina
ENSPMAG00000006949lsm610098.750ENSMNEG00000034820-10098.750Macaca_nemestrina
ENSPMAG00000006949lsm610098.750ENSMLEG00000035153LSM610098.750Mandrillus_leucophaeus
ENSPMAG00000006949lsm610095.000ENSMAMG00000014029lsm610095.000Mastacembelus_armatus
ENSPMAG00000006949lsm610095.000ENSMZEG00005009146lsm610095.000Maylandia_zebra
ENSPMAG00000006949lsm610098.750ENSMGAG00000003802LSM610098.750Meleagris_gallopavo
ENSPMAG00000006949lsm610098.750ENSMAUG00000014938Lsm610098.750Mesocricetus_auratus
ENSPMAG00000006949lsm69891.026ENSMICG00000047411-9291.026Microcebus_murinus
ENSPMAG00000006949lsm610098.750ENSMICG00000042599LSM610098.750Microcebus_murinus
ENSPMAG00000006949lsm610098.750ENSMOCG00000020049Lsm610098.750Microtus_ochrogaster
ENSPMAG00000006949lsm610088.750ENSMMOG00000007379-10088.750Mola_mola
ENSPMAG00000006949lsm610095.000ENSMMOG00000005470lsm610095.000Mola_mola
ENSPMAG00000006949lsm610098.750ENSMODG00000000526LSM610098.750Monodelphis_domestica
ENSPMAG00000006949lsm610095.000ENSMALG00000002419lsm610095.000Monopterus_albus
ENSPMAG00000006949lsm610098.750MGP_CAROLIEiJ_G0031245Lsm610098.750Mus_caroli
ENSPMAG00000006949lsm610098.750ENSMUSG00000031683Lsm610098.750Mus_musculus
ENSPMAG00000006949lsm610098.750MGP_PahariEiJ_G0022851Lsm610098.750Mus_pahari
ENSPMAG00000006949lsm610098.750MGP_SPRETEiJ_G0032365Lsm610098.750Mus_spretus
ENSPMAG00000006949lsm699100.000ENSMPUG00000006936LSM692100.000Mustela_putorius_furo
ENSPMAG00000006949lsm610098.750ENSMLUG00000026355LSM610098.750Myotis_lucifugus
ENSPMAG00000006949lsm610098.750ENSNGAG00000019116Lsm610098.750Nannospalax_galili
ENSPMAG00000006949lsm610095.000ENSNBRG00000004887lsm610095.000Neolamprologus_brichardi
ENSPMAG00000006949lsm610098.750ENSNLEG00000005584LSM610098.750Nomascus_leucogenys
ENSPMAG00000006949lsm610097.500ENSOPRG00000011199LSM610097.500Ochotona_princeps
ENSPMAG00000006949lsm610095.000ENSODEG00000019419-10095.000Octodon_degus
ENSPMAG00000006949lsm610096.250ENSODEG00000020420-10096.250Octodon_degus
ENSPMAG00000006949lsm610097.500ENSODEG00000002307-10097.500Octodon_degus
ENSPMAG00000006949lsm69688.312ENSODEG00000018684-10088.312Octodon_degus
ENSPMAG00000006949lsm610095.000ENSONIG00000010005lsm610095.000Oreochromis_niloticus
ENSPMAG00000006949lsm69873.077ENSOANG00000006895-10073.077Ornithorhynchus_anatinus
ENSPMAG00000006949lsm69873.077ENSOANG00000006894-10073.077Ornithorhynchus_anatinus
ENSPMAG00000006949lsm610093.750ENSORLG00000024158lsm610093.750Oryzias_latipes
ENSPMAG00000006949lsm610093.750ENSORLG00020017383lsm610093.750Oryzias_latipes_hni
ENSPMAG00000006949lsm610093.750ENSORLG00015016903lsm610093.750Oryzias_latipes_hsok
ENSPMAG00000006949lsm610095.000ENSOMEG00000000074lsm610095.000Oryzias_melastigma
ENSPMAG00000006949lsm610098.750ENSOGAG00000033153-10098.750Otolemur_garnettii
ENSPMAG00000006949lsm610098.750ENSOGAG00000026665-10098.750Otolemur_garnettii
ENSPMAG00000006949lsm69993.671ENSOARG00000011641-9293.671Ovis_aries
ENSPMAG00000006949lsm686100.000ENSOARG00000008509-88100.000Ovis_aries
ENSPMAG00000006949lsm610098.750ENSPPAG00000037929LSM610098.750Pan_paniscus
ENSPMAG00000006949lsm610098.750ENSPPRG00000012806LSM610098.750Panthera_pardus
ENSPMAG00000006949lsm610098.750ENSPTIG00000019769LSM610098.750Panthera_tigris_altaica
ENSPMAG00000006949lsm610098.750ENSPTRG00000016488LSM610098.750Pan_troglodytes
ENSPMAG00000006949lsm610098.750ENSPANG00000006552LSM610098.750Papio_anubis
ENSPMAG00000006949lsm610095.000ENSPKIG00000016176lsm610095.000Paramormyrops_kingsleyae
ENSPMAG00000006949lsm610098.750ENSPSIG00000016942LSM610098.750Pelodiscus_sinensis
ENSPMAG00000006949lsm610095.000ENSPMGG00000018004lsm610095.000Periophthalmus_magnuspinnatus
ENSPMAG00000006949lsm610098.750ENSPEMG00000012410Lsm610098.750Peromyscus_maniculatus_bairdii
ENSPMAG00000006949lsm610098.750ENSPCIG00000023469LSM680100.000Phascolarctos_cinereus
ENSPMAG00000006949lsm610095.000ENSPFOG00000008881lsm610095.000Poecilia_formosa
ENSPMAG00000006949lsm610095.000ENSPLAG00000003202lsm610095.000Poecilia_latipinna
ENSPMAG00000006949lsm610095.000ENSPMEG00000004000lsm610095.000Poecilia_mexicana
ENSPMAG00000006949lsm610095.000ENSPREG00000023235lsm610095.000Poecilia_reticulata
ENSPMAG00000006949lsm610098.750ENSPPYG00000015105LSM610098.750Pongo_abelii
ENSPMAG00000006949lsm610098.750ENSPCOG00000013899LSM610098.750Propithecus_coquereli
ENSPMAG00000006949lsm610095.000ENSPNYG00000012614lsm610095.000Pundamilia_nyererei
ENSPMAG00000006949lsm610095.000ENSPNAG00000018779lsm610095.000Pygocentrus_nattereri
ENSPMAG00000006949lsm610098.750ENSRNOG00000049370LOC10036075010098.750Rattus_norvegicus
ENSPMAG00000006949lsm610098.750ENSRNOG00000030374Lsm610098.750Rattus_norvegicus
ENSPMAG00000006949lsm610098.750ENSRBIG00000027878LSM610098.750Rhinopithecus_bieti
ENSPMAG00000006949lsm610098.750ENSRROG00000024868LSM610098.750Rhinopithecus_roxellana
ENSPMAG00000006949lsm69541.250YDR378C-9345.000Saccharomyces_cerevisiae
ENSPMAG00000006949lsm610098.750ENSSBOG00000021229-10098.750Saimiri_boliviensis_boliviensis
ENSPMAG00000006949lsm610072.500ENSSBOG00000028103-10072.500Saimiri_boliviensis_boliviensis
ENSPMAG00000006949lsm610095.000ENSSFOG00015016480lsm610095.000Scleropages_formosus
ENSPMAG00000006949lsm610095.000ENSSMAG00000004550lsm610095.000Scophthalmus_maximus
ENSPMAG00000006949lsm610095.000ENSSDUG00000020459lsm65095.000Seriola_dumerili
ENSPMAG00000006949lsm68697.101ENSSLDG00000004136-5997.101Seriola_lalandi_dorsalis
ENSPMAG00000006949lsm610095.000ENSSLDG00000020533lsm68395.000Seriola_lalandi_dorsalis
ENSPMAG00000006949lsm66097.917ENSSARG00000000689LSM610097.917Sorex_araneus
ENSPMAG00000006949lsm610098.750ENSSPUG00000008657LSM610098.750Sphenodon_punctatus
ENSPMAG00000006949lsm610095.000ENSSPAG00000003246lsm610095.000Stegastes_partitus
ENSPMAG00000006949lsm610098.750ENSSSCG00000035973LSM610098.750Sus_scrofa
ENSPMAG00000006949lsm610098.750ENSTGUG00000002663LSM610098.750Taeniopygia_guttata
ENSPMAG00000006949lsm610095.000ENSTRUG00000023398lsm610095.000Takifugu_rubripes
ENSPMAG00000006949lsm610095.000ENSTNIG00000017725lsm610095.000Tetraodon_nigroviridis
ENSPMAG00000006949lsm610098.750ENSTTRG00000004609LSM610098.750Tursiops_truncatus
ENSPMAG00000006949lsm69891.026ENSUAMG00000014213LSM66491.026Ursus_americanus
ENSPMAG00000006949lsm69891.026ENSUMAG00000015727LSM66491.026Ursus_maritimus
ENSPMAG00000006949lsm610098.750ENSVPAG00000006922LSM610098.750Vicugna_pacos
ENSPMAG00000006949lsm610098.750ENSVVUG00000009254LSM66898.750Vulpes_vulpes
ENSPMAG00000006949lsm610098.750ENSXETG00000023683lsm610098.750Xenopus_tropicalis
ENSPMAG00000006949lsm610095.000ENSXMAG00000009606lsm610095.000Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us