EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMAG00000006977 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 940 bases
Position: chrGL496487:1152-2091
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000007689	RRM_1	PF00076.22	4.6e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000007723	-	309	-	ENSPMAP00000007689	103 (aa)	-	S4RR53

Gene Model

Click here to download ENSPMAG00000006977's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000006977's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMAG00000006977	-	83	37.500	ENSPMAG00000004449	-	68	37.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000006977	-	100	70.874	ENSG00000120948	TARDBP	51	71.569	Homo_sapiens
ENSPMAG00000006977	-	99	66.346	ENSANAG00000027281	-	51	66.346	Aotus_nancymaae
ENSPMAG00000006977	-	100	72.816	ENSCGRG00001010684	-	52	72.816	Cricetulus_griseus_chok1gshd
ENSPMAG00000006977	-	99	62.745	ENSMFAG00000000832	-	54	62.745	Macaca_fascicularis
ENSPMAG00000006977	-	100	72.816	MGP_CAROLIEiJ_G0026805	Tardbp	50	70.833	Mus_caroli
ENSPMAG00000006977	-	100	72.816	MGP_PahariEiJ_G0029153	Tardbp	50	70.833	Mus_pahari
ENSPMAG00000006977	-	100	72.816	MGP_SPRETEiJ_G0027798	Tardbp	50	70.833	Mus_spretus