EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000006983 (Gene tree)
Gene ID: -
Gene Symbol: DDX28
Alias: -
Full Name: DEAD-box helicase 28
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Plus strand
Length: 12563 bases
Position: chrGL476438:260313-272875
Accession: 17330
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000007697	DEAD	PF00270.29	1.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000007731	DDX28-201	897	-	ENSPMAP00000007697	299 (aa)	-	S4RR61

Gene Model

Click here to download ENSPMAG00000006983's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000006983's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000006983	DDX28	93	50.355	ENSG00000182810	DDX28	52	50.355	Homo_sapiens
ENSPMAG00000006983	DDX28	97	48.475	ENSAMEG00000019426	DDX28	55	48.475	Ailuropoda_melanoleuca
ENSPMAG00000006983	DDX28	94	48.951	ENSACAG00000009755	DDX28	52	48.951	Anolis_carolinensis
ENSPMAG00000006983	DDX28	97	49.153	ENSBTAG00000004290	DDX28	54	49.153	Bos_taurus
ENSPMAG00000006983	DDX28	91	49.458	ENSCAFG00000020327	DDX28	52	49.458	Canis_familiaris
ENSPMAG00000006983	DDX28	91	49.458	ENSCAFG00020019785	DDX28	52	49.458	Canis_lupus_dingo
ENSPMAG00000006983	DDX28	97	48.814	ENSCHIG00000009658	DDX28	54	48.814	Capra_hircus
ENSPMAG00000006983	DDX28	96	48.973	ENSCPOG00000013746	DDX28	54	48.973	Cavia_porcellus
ENSPMAG00000006983	DDX28	95	48.611	ENSCSAG00000018472	DDX28	52	48.611	Chlorocebus_sabaeus
ENSPMAG00000006983	DDX28	95	48.252	ENSCPBG00000012105	DDX28	55	48.214	Chrysemys_picta_bellii
ENSPMAG00000006983	DDX28	92	38.182	ENSCSAVG00000006341	-	72	38.182	Ciona_savignyi
ENSPMAG00000006983	DDX28	88	48.699	ENSCGRG00001024412	Ddx28	51	48.699	Cricetulus_griseus_chok1gshd
ENSPMAG00000006983	DDX28	95	45.804	ENSCSEG00000011651	ddx28	50	45.804	Cynoglossus_semilaevis
ENSPMAG00000006983	DDX28	95	47.552	ENSCVAG00000004044	ddx28	51	47.552	Cyprinodon_variegatus
ENSPMAG00000006983	DDX28	93	50.355	ENSDNOG00000033593	DDX28	76	50.355	Dasypus_novemcinctus
ENSPMAG00000006983	DDX28	93	49.645	ENSDORG00000028868	Ddx28	52	49.645	Dipodomys_ordii
ENSPMAG00000006983	DDX28	94	38.869	FBgn0086130	Dbp21E2	51	38.869	Drosophila_melanogaster
ENSPMAG00000006983	DDX28	91	49.640	ENSETEG00000001062	-	51	49.640	Echinops_telfairi
ENSPMAG00000006983	DDX28	93	50.000	ENSEASG00005020387	DDX28	52	50.000	Equus_asinus_asinus
ENSPMAG00000006983	DDX28	93	50.000	ENSECAG00000006451	DDX28	52	50.000	Equus_caballus
ENSPMAG00000006983	DDX28	92	49.091	ENSELUG00000005302	ddx28	54	47.902	Esox_lucius
ENSPMAG00000006983	DDX28	93	48.763	ENSFCAG00000012858	DDX28	52	48.763	Felis_catus
ENSPMAG00000006983	DDX28	93	48.592	ENSGMOG00000017045	ddx28	53	48.592	Gadus_morhua
ENSPMAG00000006983	DDX28	92	47.122	ENSGACG00000016367	ddx28	51	47.122	Gasterosteus_aculeatus
ENSPMAG00000006983	DDX28	93	50.355	ENSGGOG00000001220	DDX28	52	50.355	Gorilla_gorilla
ENSPMAG00000006983	DDX28	95	46.875	ENSHCOG00000017590	ddx28	51	46.875	Hippocampus_comes
ENSPMAG00000006983	DDX28	92	50.890	ENSSTOG00000002064	DDX28	52	50.890	Ictidomys_tridecemlineatus
ENSPMAG00000006983	DDX28	96	47.386	ENSJJAG00000012460	-	56	47.386	Jaculus_jaculus
ENSPMAG00000006983	DDX28	94	47.552	ENSLBEG00000006072	ddx28	51	47.552	Labrus_bergylta
ENSPMAG00000006983	DDX28	99	48.822	ENSLACG00000005578	DDX28	51	48.822	Latimeria_chalumnae
ENSPMAG00000006983	DDX28	93	51.786	ENSLOCG00000017604	ddx28	50	51.786	Lepisosteus_oculatus
ENSPMAG00000006983	DDX28	93	47.872	ENSLAFG00000031239	DDX28	52	47.872	Loxodonta_africana
ENSPMAG00000006983	DDX28	95	48.958	ENSMMUG00000010836	DDX28	52	48.958	Macaca_mulatta
ENSPMAG00000006983	DDX28	96	40.476	ENSMICG00000012346	-	56	40.476	Microcebus_murinus
ENSPMAG00000006983	DDX28	93	50.883	ENSMOCG00000009815	Ddx28	52	50.883	Microtus_ochrogaster
ENSPMAG00000006983	DDX28	95	50.173	ENSMODG00000005303	DDX28	53	50.173	Monodelphis_domestica
ENSPMAG00000006983	DDX28	95	47.368	ENSMALG00000008864	ddx28	50	47.368	Monopterus_albus
ENSPMAG00000006983	DDX28	96	49.660	MGP_CAROLIEiJ_G0031510	Ddx28	54	49.660	Mus_caroli
ENSPMAG00000006983	DDX28	94	51.399	ENSMUSG00000045538	Ddx28	52	51.399	Mus_musculus
ENSPMAG00000006983	DDX28	93	51.237	MGP_PahariEiJ_G0023110	Ddx28	52	51.237	Mus_pahari
ENSPMAG00000006983	DDX28	94	51.049	MGP_SPRETEiJ_G0032628	Ddx28	52	51.049	Mus_spretus
ENSPMAG00000006983	DDX28	86	48.473	ENSMPUG00000006915	DDX28	64	48.473	Mustela_putorius_furo
ENSPMAG00000006983	DDX28	91	49.638	ENSMLUG00000005899	DDX28	51	49.638	Myotis_lucifugus
ENSPMAG00000006983	DDX28	93	48.582	ENSNGAG00000015762	Ddx28	52	48.582	Nannospalax_galili
ENSPMAG00000006983	DDX28	92	46.595	ENSOANG00000003551	-	97	46.595	Ornithorhynchus_anatinus
ENSPMAG00000006983	DDX28	93	50.355	ENSOCUG00000023074	DDX28	52	50.355	Oryctolagus_cuniculus
ENSPMAG00000006983	DDX28	92	47.653	ENSORLG00020001951	ddx28	50	47.653	Oryzias_latipes_hni
ENSPMAG00000006983	DDX28	92	46.931	ENSORLG00015023030	ddx28	50	46.931	Oryzias_latipes_hsok
ENSPMAG00000006983	DDX28	93	50.000	ENSOGAG00000016895	DDX28	52	50.000	Otolemur_garnettii
ENSPMAG00000006983	DDX28	97	44.407	ENSOARG00000003313	DDX28	64	44.407	Ovis_aries
ENSPMAG00000006983	DDX28	93	47.163	ENSPPAG00000036971	DDX28	50	47.163	Pan_paniscus
ENSPMAG00000006983	DDX28	93	48.763	ENSPPRG00000018322	DDX28	52	48.763	Panthera_pardus
ENSPMAG00000006983	DDX28	93	48.763	ENSPTIG00000006444	DDX28	53	48.763	Panthera_tigris_altaica
ENSPMAG00000006983	DDX28	93	50.709	ENSPTRG00000008258	DDX28	52	50.709	Pan_troglodytes
ENSPMAG00000006983	DDX28	95	50.704	ENSPKIG00000021200	ddx28	52	50.704	Paramormyrops_kingsleyae
ENSPMAG00000006983	DDX28	93	48.921	ENSPSIG00000001127	DDX28	92	48.921	Pelodiscus_sinensis
ENSPMAG00000006983	DDX28	95	46.875	ENSPEMG00000003395	Ddx28	53	46.875	Peromyscus_maniculatus_bairdii
ENSPMAG00000006983	DDX28	96	47.766	ENSPMEG00000011311	ddx28	50	47.766	Poecilia_mexicana
ENSPMAG00000006983	DDX28	93	49.291	ENSPPYG00000007481	DDX28	52	49.291	Pongo_abelii
ENSPMAG00000006983	DDX28	93	49.291	ENSPCOG00000024632	DDX28	52	49.291	Propithecus_coquereli
ENSPMAG00000006983	DDX28	92	48.905	ENSPNAG00000014597	ddx28	50	48.905	Pygocentrus_nattereri
ENSPMAG00000006983	DDX28	93	48.936	ENSRNOG00000019817	Ddx28	52	48.936	Rattus_norvegicus
ENSPMAG00000006983	DDX28	95	50.175	ENSSFOG00015010181	ddx28	51	50.175	Scleropages_formosus
ENSPMAG00000006983	DDX28	95	48.421	ENSSMAG00000006831	ddx28	53	48.421	Scophthalmus_maximus
ENSPMAG00000006983	DDX28	93	50.538	ENSSARG00000014169	DDX28	51	50.538	Sorex_araneus
ENSPMAG00000006983	DDX28	95	48.252	ENSSPAG00000000988	ddx28	50	48.252	Stegastes_partitus
ENSPMAG00000006983	DDX28	93	48.936	ENSSSCG00000026038	DDX28	52	48.936	Sus_scrofa
ENSPMAG00000006983	DDX28	92	46.739	ENSTRUG00000007815	ddx28	50	46.739	Takifugu_rubripes
ENSPMAG00000006983	DDX28	91	48.540	ENSTNIG00000011352	ddx28	55	48.540	Tetraodon_nigroviridis
ENSPMAG00000006983	DDX28	97	48.814	ENSUAMG00000016116	DDX28	54	48.814	Ursus_americanus
ENSPMAG00000006983	DDX28	98	48.322	ENSUMAG00000019200	DDX28	60	48.322	Ursus_maritimus
ENSPMAG00000006983	DDX28	99	47.651	ENSXETG00000005435	ddx28	59	47.651	Xenopus_tropicalis
ENSPMAG00000006983	DDX28	92	48.913	ENSXMAG00000019603	ddx28	50	48.913	Xiphophorus_maculatus