EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000007275 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Plus strand
Length: 4928 bases
Position: chrGL490067:1603-6530
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000008008	Exo_endo_phos	PF03372.23	4.4e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000008044	-	888	-	ENSPMAP00000008008	295 (aa)	-	S4RS20

Gene Model

Click here to download ENSPMAG00000007275's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000007275's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000007275	-	95	69.039	ENSG00000100823	APEX1	94	66.667	Homo_sapiens
ENSPMAG00000007275	-	95	70.968	ENSAPOG00000017002	apex1	94	69.759	Acanthochromis_polyacanthus
ENSPMAG00000007275	-	95	67.260	ENSAMEG00000005418	APEX1	94	65.667	Ailuropoda_melanoleuca
ENSPMAG00000007275	-	94	72.924	ENSACIG00000010653	apex1	97	71.821	Amphilophus_citrinellus
ENSPMAG00000007275	-	95	70.968	ENSAOCG00000009649	apex1	93	69.759	Amphiprion_ocellaris
ENSPMAG00000007275	-	95	71.326	ENSAPEG00000021453	apex1	93	70.103	Amphiprion_percula
ENSPMAG00000007275	-	93	74.818	ENSATEG00000002883	apex1	91	73.448	Anabas_testudineus
ENSPMAG00000007275	-	95	71.071	ENSACAG00000008099	APEX1	94	70.470	Anolis_carolinensis
ENSPMAG00000007275	-	95	69.039	ENSANAG00000030117	APEX1	94	66.333	Aotus_nancymaae
ENSPMAG00000007275	-	93	73.818	ENSACLG00000018441	apex1	92	72.474	Astatotilapia_calliptera
ENSPMAG00000007275	-	99	71.769	ENSAMXG00000034699	apex1	93	71.769	Astyanax_mexicanus
ENSPMAG00000007275	-	95	66.548	ENSBTAG00000002745	APEX1	94	64.667	Bos_taurus
ENSPMAG00000007275	-	88	46.183	WBGene00001372	exo-3	90	46.183	Caenorhabditis_elegans
ENSPMAG00000007275	-	95	69.039	ENSCJAG00000009726	APEX1	94	66.667	Callithrix_jacchus
ENSPMAG00000007275	-	95	68.683	ENSCAFG00000032033	APEX1	94	66.333	Canis_familiaris
ENSPMAG00000007275	-	95	68.683	ENSCAFG00020014377	-	94	66.333	Canis_lupus_dingo
ENSPMAG00000007275	-	93	53.285	ENSCHIG00000014537	-	95	52.525	Capra_hircus
ENSPMAG00000007275	-	95	66.548	ENSCHIG00000007298	-	94	64.667	Capra_hircus
ENSPMAG00000007275	-	99	64.333	ENSTSYG00000034813	APEX1	94	64.333	Carlito_syrichta
ENSPMAG00000007275	-	87	65.769	ENSCAPG00000016235	APEX1	91	70.042	Cavia_aperea
ENSPMAG00000007275	-	99	67.000	ENSCPOG00000030909	APEX1	94	67.000	Cavia_porcellus
ENSPMAG00000007275	-	95	69.039	ENSCCAG00000033056	-	94	66.667	Cebus_capucinus
ENSPMAG00000007275	-	95	58.007	ENSCCAG00000031931	-	94	56.333	Cebus_capucinus
ENSPMAG00000007275	-	99	66.000	ENSCATG00000015580	APEX1	94	66.000	Cercocebus_atys
ENSPMAG00000007275	-	99	65.667	ENSCLAG00000001002	APEX1	94	65.667	Chinchilla_lanigera
ENSPMAG00000007275	-	99	66.333	ENSCSAG00000016670	-	94	66.333	Chlorocebus_sabaeus
ENSPMAG00000007275	-	99	66.333	ENSCSAG00000016685	-	94	66.333	Chlorocebus_sabaeus
ENSPMAG00000007275	-	87	30.132	ENSCPBG00000016631	APEX2	62	30.132	Chrysemys_picta_bellii
ENSPMAG00000007275	-	96	71.631	ENSCPBG00000009567	APEX1	94	69.900	Chrysemys_picta_bellii
ENSPMAG00000007275	-	100	55.593	ENSCING00000008137	-	93	55.593	Ciona_intestinalis
ENSPMAG00000007275	-	92	52.963	ENSCSAVG00000007144	-	100	54.054	Ciona_savignyi
ENSPMAG00000007275	-	100	66.445	ENSCANG00000030726	APEX1	94	66.445	Colobus_angolensis_palliatus
ENSPMAG00000007275	-	100	65.116	ENSCGRG00001017046	Apex1	95	65.116	Cricetulus_griseus_chok1gshd
ENSPMAG00000007275	-	100	65.116	ENSCGRG00000008984	Apex1	95	65.116	Cricetulus_griseus_crigri
ENSPMAG00000007275	-	97	71.080	ENSCSEG00000017499	apex1	92	71.080	Cynoglossus_semilaevis
ENSPMAG00000007275	-	95	74.194	ENSCVAG00000022075	apex1	93	72.509	Cyprinodon_variegatus
ENSPMAG00000007275	-	94	74.368	ENSDARG00000045843	apex1	93	73.196	Danio_rerio
ENSPMAG00000007275	-	95	62.633	ENSDNOG00000042234	APEX1	89	61.333	Dasypus_novemcinctus
ENSPMAG00000007275	-	99	65.000	ENSDORG00000001616	Apex1	94	65.000	Dipodomys_ordii
ENSPMAG00000007275	-	95	69.395	ENSETEG00000004855	-	94	67.333	Echinops_telfairi
ENSPMAG00000007275	-	81	66.807	ENSEBUG00000000622	-	92	66.807	Eptatretus_burgeri
ENSPMAG00000007275	-	99	66.000	ENSEASG00005017489	APEX1	69	66.000	Equus_asinus_asinus
ENSPMAG00000007275	-	99	66.000	ENSECAG00000022325	APEX1	77	66.000	Equus_caballus
ENSPMAG00000007275	-	92	66.052	ENSEEUG00000012569	APEX1	100	63.668	Erinaceus_europaeus
ENSPMAG00000007275	-	94	72.924	ENSELUG00000021706	apex1	93	72.014	Esox_lucius
ENSPMAG00000007275	-	99	66.000	ENSFCAG00000030869	APEX1	94	66.000	Felis_catus
ENSPMAG00000007275	-	99	66.333	ENSFDAG00000006120	APEX1	94	66.333	Fukomys_damarensis
ENSPMAG00000007275	-	95	73.835	ENSFHEG00000009031	apex1	77	72.509	Fundulus_heteroclitus
ENSPMAG00000007275	-	99	68.367	ENSGMOG00000007943	apex1	94	68.367	Gadus_morhua
ENSPMAG00000007275	-	95	72.401	ENSGAFG00000005311	apex1	93	71.134	Gambusia_affinis
ENSPMAG00000007275	-	95	72.043	ENSGACG00000019497	apex1	99	72.285	Gasterosteus_aculeatus
ENSPMAG00000007275	-	96	71.277	ENSGAGG00000014999	APEX1	94	69.900	Gopherus_agassizii
ENSPMAG00000007275	-	95	68.683	ENSGGOG00000002128	APEX1	94	66.333	Gorilla_gorilla
ENSPMAG00000007275	-	93	73.818	ENSHBUG00000005894	apex1	93	72.474	Haplochromis_burtoni
ENSPMAG00000007275	-	99	66.333	ENSHGLG00000002848	APEX1	94	66.333	Heterocephalus_glaber_female
ENSPMAG00000007275	-	99	66.333	ENSHGLG00100017878	APEX1	94	66.333	Heterocephalus_glaber_male
ENSPMAG00000007275	-	100	70.508	ENSHCOG00000009961	apex1	94	70.508	Hippocampus_comes
ENSPMAG00000007275	-	99	70.748	ENSIPUG00000005799	apex1	94	70.748	Ictalurus_punctatus
ENSPMAG00000007275	-	95	68.683	ENSSTOG00000010096	APEX1	94	66.333	Ictidomys_tridecemlineatus
ENSPMAG00000007275	-	95	59.431	ENSJJAG00000020465	-	96	57.860	Jaculus_jaculus
ENSPMAG00000007275	-	99	64.000	ENSJJAG00000012067	-	94	64.000	Jaculus_jaculus
ENSPMAG00000007275	-	95	59.075	ENSJJAG00000003660	-	94	57.333	Jaculus_jaculus
ENSPMAG00000007275	-	95	73.477	ENSKMAG00000021171	apex1	93	72.165	Kryptolebias_marmoratus
ENSPMAG00000007275	-	95	72.043	ENSLBEG00000010248	apex1	93	71.134	Labrus_bergylta
ENSPMAG00000007275	-	100	73.220	ENSLACG00000008617	APEX1	94	73.220	Latimeria_chalumnae
ENSPMAG00000007275	-	99	75.768	ENSLOCG00000015516	apex1	92	75.768	Lepisosteus_oculatus
ENSPMAG00000007275	-	95	69.395	ENSLAFG00000021872	APEX1	94	66.667	Loxodonta_africana
ENSPMAG00000007275	-	99	67.466	ENSMFAG00000002565	APEX1	94	66.000	Macaca_fascicularis
ENSPMAG00000007275	-	99	66.000	ENSMMUG00000048039	APEX1	94	66.000	Macaca_mulatta
ENSPMAG00000007275	-	100	65.781	ENSMNEG00000036944	APEX1	94	66.000	Macaca_nemestrina
ENSPMAG00000007275	-	99	66.000	ENSMLEG00000042125	APEX1	94	66.000	Mandrillus_leucophaeus
ENSPMAG00000007275	-	95	72.401	ENSMAMG00000023526	apex1	93	71.134	Mastacembelus_armatus
ENSPMAG00000007275	-	93	73.818	ENSMZEG00005014187	apex1	92	72.474	Maylandia_zebra
ENSPMAG00000007275	-	100	66.113	ENSMAUG00000013994	Apex1	95	66.113	Mesocricetus_auratus
ENSPMAG00000007275	-	99	64.667	ENSMICG00000043554	APEX1	94	64.667	Microcebus_murinus
ENSPMAG00000007275	-	100	65.116	ENSMOCG00000013721	Apex1	95	65.116	Microtus_ochrogaster
ENSPMAG00000007275	-	95	72.857	ENSMMOG00000010031	apex1	91	71.575	Mola_mola
ENSPMAG00000007275	-	96	67.958	ENSMODG00000007125	APEX1	93	66.779	Monodelphis_domestica
ENSPMAG00000007275	-	95	67.384	ENSMALG00000011699	apex1	77	66.323	Monopterus_albus
ENSPMAG00000007275	-	99	65.116	MGP_CAROLIEiJ_G0019209	Apex1	94	65.116	Mus_caroli
ENSPMAG00000007275	-	100	65.232	ENSMUSG00000035960	Apex1	95	65.232	Mus_musculus
ENSPMAG00000007275	-	94	68.345	MGP_PahariEiJ_G0030232	Apex1	95	65.894	Mus_pahari
ENSPMAG00000007275	-	100	65.232	MGP_SPRETEiJ_G0020101	Apex1	95	65.232	Mus_spretus
ENSPMAG00000007275	-	99	65.563	ENSMLUG00000028957	APEX1	94	65.563	Myotis_lucifugus
ENSPMAG00000007275	-	98	47.525	ENSNGAG00000021748	-	93	47.525	Nannospalax_galili
ENSPMAG00000007275	-	99	64.333	ENSNGAG00000002725	-	94	64.333	Nannospalax_galili
ENSPMAG00000007275	-	93	73.818	ENSNBRG00000005334	apex1	84	72.474	Neolamprologus_brichardi
ENSPMAG00000007275	-	95	68.327	ENSNLEG00000010839	APEX1	96	65.333	Nomascus_leucogenys
ENSPMAG00000007275	-	99	66.667	ENSMEUG00000014519	APEX1	94	66.667	Notamacropus_eugenii
ENSPMAG00000007275	-	99	64.548	ENSOPRG00000014029	APEX1	94	64.548	Ochotona_princeps
ENSPMAG00000007275	-	97	53.684	ENSODEG00000004777	-	92	53.684	Octodon_degus
ENSPMAG00000007275	-	99	65.333	ENSODEG00000001703	-	94	65.333	Octodon_degus
ENSPMAG00000007275	-	99	51.307	ENSODEG00000006583	-	94	50.980	Octodon_degus
ENSPMAG00000007275	-	94	74.007	ENSONIG00000012089	apex1	92	72.822	Oreochromis_niloticus
ENSPMAG00000007275	-	96	67.958	ENSOANG00000008836	APEX1	74	67.442	Ornithorhynchus_anatinus
ENSPMAG00000007275	-	95	67.972	ENSOCUG00000005022	APEX1	94	65.333	Oryctolagus_cuniculus
ENSPMAG00000007275	-	94	74.007	ENSORLG00000012378	apex1	93	72.509	Oryzias_latipes
ENSPMAG00000007275	-	94	74.007	ENSORLG00020021371	apex1	93	72.509	Oryzias_latipes_hni
ENSPMAG00000007275	-	94	74.007	ENSORLG00015020089	apex1	93	72.509	Oryzias_latipes_hsok
ENSPMAG00000007275	-	95	73.477	ENSOMEG00000018876	apex1	93	72.165	Oryzias_melastigma
ENSPMAG00000007275	-	99	66.000	ENSOGAG00000013335	-	94	66.000	Otolemur_garnettii
ENSPMAG00000007275	-	95	60.142	ENSOGAG00000029355	-	95	58.333	Otolemur_garnettii
ENSPMAG00000007275	-	99	55.068	ENSOARG00000014424	-	94	55.068	Ovis_aries
ENSPMAG00000007275	-	92	63.100	ENSOARG00000001876	-	94	61.379	Ovis_aries
ENSPMAG00000007275	-	95	66.548	ENSOARG00000019740	-	94	64.667	Ovis_aries
ENSPMAG00000007275	-	95	69.039	ENSPPAG00000038760	APEX1	96	66.333	Pan_paniscus
ENSPMAG00000007275	-	95	67.972	ENSPPRG00000011794	APEX1	94	65.667	Panthera_pardus
ENSPMAG00000007275	-	99	66.000	ENSPTIG00000014829	APEX1	94	66.000	Panthera_tigris_altaica
ENSPMAG00000007275	-	95	69.039	ENSPTRG00000006093	APEX1	96	66.333	Pan_troglodytes
ENSPMAG00000007275	-	99	66.000	ENSPANG00000022757	APEX1	94	66.000	Papio_anubis
ENSPMAG00000007275	-	94	72.924	ENSPKIG00000003504	apex1	93	71.525	Paramormyrops_kingsleyae
ENSPMAG00000007275	-	80	72.034	ENSPMGG00000016596	apex1	71	72.034	Periophthalmus_magnuspinnatus
ENSPMAG00000007275	-	100	65.116	ENSPEMG00000019097	Apex1	95	65.116	Peromyscus_maniculatus_bairdii
ENSPMAG00000007275	-	95	67.972	ENSPCIG00000023274	APEX1	92	66.553	Phascolarctos_cinereus
ENSPMAG00000007275	-	95	73.118	ENSPFOG00000004178	apex1	93	71.821	Poecilia_formosa
ENSPMAG00000007275	-	95	72.760	ENSPLAG00000012779	apex1	93	71.478	Poecilia_latipinna
ENSPMAG00000007275	-	95	73.118	ENSPMEG00000019623	apex1	93	71.821	Poecilia_mexicana
ENSPMAG00000007275	-	95	71.326	ENSPREG00000014298	apex1	93	70.103	Poecilia_reticulata
ENSPMAG00000007275	-	95	68.683	ENSPPYG00000005565	APEX1	94	66.333	Pongo_abelii
ENSPMAG00000007275	-	99	65.333	ENSPCAG00000010376	APEX1	94	65.333	Procavia_capensis
ENSPMAG00000007275	-	99	65.000	ENSPCOG00000021564	APEX1	94	65.000	Propithecus_coquereli
ENSPMAG00000007275	-	99	66.556	ENSPVAG00000010736	APEX1	94	66.556	Pteropus_vampyrus
ENSPMAG00000007275	-	93	74.182	ENSPNYG00000023940	apex1	92	72.822	Pundamilia_nyererei
ENSPMAG00000007275	-	96	70.213	ENSPNAG00000020897	apex1	89	72.119	Pygocentrus_nattereri
ENSPMAG00000007275	-	100	65.232	ENSRNOG00000009663	Apex1	95	65.232	Rattus_norvegicus
ENSPMAG00000007275	-	99	66.333	ENSRBIG00000038325	APEX1	93	66.333	Rhinopithecus_bieti
ENSPMAG00000007275	-	99	60.616	ENSSBOG00000031372	-	99	58.497	Saimiri_boliviensis_boliviensis
ENSPMAG00000007275	-	95	69.039	ENSSBOG00000018921	-	94	66.667	Saimiri_boliviensis_boliviensis
ENSPMAG00000007275	-	95	67.606	ENSSHAG00000013524	APEX1	93	65.894	Sarcophilus_harrisii
ENSPMAG00000007275	-	94	74.007	ENSSFOG00015001948	apex1	94	72.542	Scleropages_formosus
ENSPMAG00000007275	-	94	71.119	ENSSMAG00000013348	apex1	90	70.671	Scophthalmus_maximus
ENSPMAG00000007275	-	95	72.043	ENSSDUG00000016377	apex1	93	71.134	Seriola_dumerili
ENSPMAG00000007275	-	95	72.401	ENSSLDG00000023005	apex1	93	71.478	Seriola_lalandi_dorsalis
ENSPMAG00000007275	-	99	70.068	ENSSPUG00000000531	APEX1	99	70.068	Sphenodon_punctatus
ENSPMAG00000007275	-	95	72.043	ENSSPAG00000000458	apex1	94	70.447	Stegastes_partitus
ENSPMAG00000007275	-	93	68.116	ENSSSCG00000040060	-	94	65.449	Sus_scrofa
ENSPMAG00000007275	-	88	39.850	ENSSSCG00000039705	-	86	39.850	Sus_scrofa
ENSPMAG00000007275	-	80	60.169	ENSTGUG00000014378	APEX1	100	60.169	Taeniopygia_guttata
ENSPMAG00000007275	-	94	73.646	ENSTRUG00000004268	apex1	87	72.069	Takifugu_rubripes
ENSPMAG00000007275	-	99	72.165	ENSTNIG00000005778	apex1	94	72.165	Tetraodon_nigroviridis
ENSPMAG00000007275	-	95	65.480	ENSTBEG00000006405	APEX1	94	64.120	Tupaia_belangeri
ENSPMAG00000007275	-	80	67.797	ENSTTRG00000007860	APEX1	100	67.797	Tursiops_truncatus
ENSPMAG00000007275	-	99	65.667	ENSUAMG00000010457	APEX1	94	65.667	Ursus_americanus
ENSPMAG00000007275	-	99	65.667	ENSUMAG00000009178	APEX1	94	65.667	Ursus_maritimus
ENSPMAG00000007275	-	80	64.831	ENSVPAG00000005083	APEX1	100	64.831	Vicugna_pacos
ENSPMAG00000007275	-	95	68.327	ENSVVUG00000009010	APEX1	94	65.667	Vulpes_vulpes
ENSPMAG00000007275	-	94	75.362	ENSXETG00000024773	apex1	94	73.737	Xenopus_tropicalis
ENSPMAG00000007275	-	95	73.118	ENSXCOG00000015233	apex1	93	71.821	Xiphophorus_couchianus
ENSPMAG00000007275	-	95	73.118	ENSXMAG00000006195	apex1	93	71.821	Xiphophorus_maculatus