EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMAG00000007278 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Plus strand
Length: 7819 bases
Position: chrGL485371:2633-10451
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000008017	RNB	PF00773.19	4.1e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000008053	-	936	-	ENSPMAP00000008017	312 (aa)	-	S4RS28

Gene Model

Click here to download ENSPMAG00000007278's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000007278's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMAG00000007278	-	99	61.468	ENSPMAG00000009854	-	66	61.468
ENSPMAG00000007278	-	97	60.883	ENSPMAG00000008878	-	51	60.883
ENSPMAG00000007278	-	82	53.455	ENSPMAG00000001512	-	67	53.455
ENSPMAG00000007278	-	99	63.871	ENSPMAG00000000743	-	58	64.194

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000007278	-	99	44.954	ENSG00000083520	DIS3	57	44.954	Homo_sapiens
ENSPMAG00000007278	-	99	45.872	ENSCAFG00020025806	DIS3	56	45.872	Canis_lupus_dingo
ENSPMAG00000007278	-	99	43.769	ENSFHEG00000021783	dis3	57	43.769	Fundulus_heteroclitus
ENSPMAG00000007278	-	99	43.789	ENSHCOG00000017752	dis3	54	44.099	Hippocampus_comes
ENSPMAG00000007278	-	100	44.817	ENSMUSG00000033166	Dis3	56	44.817	Mus_musculus
ENSPMAG00000007278	-	99	44.817	ENSSARG00000011803	-	60	44.817	Sorex_araneus
ENSPMAG00000007278	-	99	43.168	ENSSPUG00000011738	DIS3	51	43.168	Sphenodon_punctatus
ENSPMAG00000007278	-	99	45.872	ENSUAMG00000027931	DIS3	56	45.872	Ursus_americanus
ENSPMAG00000007278	-	99	45.872	ENSUMAG00000009496	DIS3	58	45.872	Ursus_maritimus