EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000007282 (Gene tree)
Gene ID: -
Gene Symbol: cstf3
Alias: -
Full Name: cleavage stimulation factor%2C 3' pre-RNA%2C subunit 3
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Plus strand
Length: 47453 bases
Position: chrGL477137:77157-124609
Accession: ZDB-GENE-040426-1997
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000008069	Suf	PF05843.14	3.9e-86	1	1
ENSPMAP00000008073	Suf	PF05843.14	3.9e-86	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000008109	-	2151	-	ENSPMAP00000008073	717 (aa)	-	S4RS84
ENSPMAT00000008105	-	2151	-	ENSPMAP00000008069	717 (aa)	-	S4RS80

Gene Model

Click here to download ENSPMAG00000007282's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000007282's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000007282	cstf3	99	80.337	ENSG00000176102	CSTF3	99	80.337	Homo_sapiens
ENSPMAG00000007282	cstf3	100	78.750	ENSAPOG00000014054	cstf3	99	79.155	Acanthochromis_polyacanthus
ENSPMAG00000007282	cstf3	99	79.747	ENSAMEG00000007187	CSTF3	99	79.777	Ailuropoda_melanoleuca
ENSPMAG00000007282	cstf3	87	75.478	ENSACIG00000005539	cstf3	100	75.120	Amphilophus_citrinellus
ENSPMAG00000007282	cstf3	100	78.889	ENSAOCG00000010930	cstf3	99	79.296	Amphiprion_ocellaris
ENSPMAG00000007282	cstf3	100	78.889	ENSAPEG00000007903	cstf3	99	79.296	Amphiprion_percula
ENSPMAG00000007282	cstf3	99	79.606	ENSATEG00000000190	cstf3	99	79.437	Anabas_testudineus
ENSPMAG00000007282	cstf3	99	79.747	ENSAPLG00000007217	CSTF3	100	79.747	Anas_platyrhynchos
ENSPMAG00000007282	cstf3	100	79.444	ENSACAG00000002823	CSTF3	99	80.028	Anolis_carolinensis
ENSPMAG00000007282	cstf3	99	80.337	ENSANAG00000020699	CSTF3	98	84.413	Aotus_nancymaae
ENSPMAG00000007282	cstf3	98	79.520	ENSACLG00000007820	cstf3	99	79.296	Astatotilapia_calliptera
ENSPMAG00000007282	cstf3	99	78.121	ENSAMXG00000014198	cstf3	99	78.401	Astyanax_mexicanus
ENSPMAG00000007282	cstf3	99	80.337	ENSBTAG00000008617	CSTF3	100	80.383	Bos_taurus
ENSPMAG00000007282	cstf3	97	49.111	WBGene00006307	suf-1	89	51.745	Caenorhabditis_elegans
ENSPMAG00000007282	cstf3	99	80.337	ENSCJAG00000005533	CSTF3	100	81.081	Callithrix_jacchus
ENSPMAG00000007282	cstf3	99	80.337	ENSCAFG00000007264	CSTF3	99	80.337	Canis_familiaris
ENSPMAG00000007282	cstf3	99	79.887	ENSCAFG00020002715	CSTF3	99	79.354	Canis_lupus_dingo
ENSPMAG00000007282	cstf3	98	78.895	ENSCHIG00000016418	CSTF3	100	81.081	Capra_hircus
ENSPMAG00000007282	cstf3	99	80.337	ENSTSYG00000000451	CSTF3	99	86.918	Carlito_syrichta
ENSPMAG00000007282	cstf3	83	82.783	ENSCAPG00000010958	CSTF3	98	82.783	Cavia_aperea
ENSPMAG00000007282	cstf3	99	79.888	ENSCPOG00000005545	CSTF3	100	79.916	Cavia_porcellus
ENSPMAG00000007282	cstf3	99	80.337	ENSCCAG00000024790	CSTF3	97	86.026	Cebus_capucinus
ENSPMAG00000007282	cstf3	99	80.337	ENSCATG00000007080	CSTF3	100	81.081	Cercocebus_atys
ENSPMAG00000007282	cstf3	99	80.337	ENSCLAG00000016179	CSTF3	99	80.337	Chinchilla_lanigera
ENSPMAG00000007282	cstf3	78	85.714	ENSCHOG00000002497	CSTF3	79	85.714	Choloepus_hoffmanni
ENSPMAG00000007282	cstf3	100	79.612	ENSCPBG00000006753	CSTF3	99	80.337	Chrysemys_picta_bellii
ENSPMAG00000007282	cstf3	99	59.534	ENSCING00000006401	-	99	59.589	Ciona_intestinalis
ENSPMAG00000007282	cstf3	98	59.637	ENSCSAVG00000004851	-	100	59.414	Ciona_savignyi
ENSPMAG00000007282	cstf3	99	80.337	ENSCANG00000035468	CSTF3	100	81.081	Colobus_angolensis_palliatus
ENSPMAG00000007282	cstf3	99	80.307	ENSCGRG00001014773	Cstf3	100	80.000	Cricetulus_griseus_chok1gshd
ENSPMAG00000007282	cstf3	99	80.307	ENSCGRG00000004142	Cstf3	100	80.000	Cricetulus_griseus_crigri
ENSPMAG00000007282	cstf3	99	78.442	ENSCSEG00000014283	cstf3	99	78.273	Cynoglossus_semilaevis
ENSPMAG00000007282	cstf3	100	78.611	ENSCVAG00000019739	cstf3	99	79.014	Cyprinodon_variegatus
ENSPMAG00000007282	cstf3	99	78.762	ENSDARG00000018904	cstf3	99	78.762	Danio_rerio
ENSPMAG00000007282	cstf3	99	79.606	ENSDNOG00000007366	CSTF3	99	80.056	Dasypus_novemcinctus
ENSPMAG00000007282	cstf3	99	73.315	ENSDORG00000005898	Cstf3	99	73.773	Dipodomys_ordii
ENSPMAG00000007282	cstf3	98	55.724	FBgn0003559	su(f)	98	55.479	Drosophila_melanogaster
ENSPMAG00000007282	cstf3	90	76.161	ENSETEG00000017097	CSTF3	90	76.161	Echinops_telfairi
ENSPMAG00000007282	cstf3	85	73.026	ENSEBUG00000015459	cstf3	96	73.026	Eptatretus_burgeri
ENSPMAG00000007282	cstf3	99	79.044	ENSEASG00005019884	CSTF3	96	86.918	Equus_asinus_asinus
ENSPMAG00000007282	cstf3	99	79.044	ENSECAG00000023338	CSTF3	96	86.918	Equus_caballus
ENSPMAG00000007282	cstf3	99	75.279	ENSEEUG00000015167	CSTF3	99	75.279	Erinaceus_europaeus
ENSPMAG00000007282	cstf3	99	78.303	ENSELUG00000023393	cstf3	99	78.134	Esox_lucius
ENSPMAG00000007282	cstf3	99	80.337	ENSFCAG00000030711	CSTF3	99	80.337	Felis_catus
ENSPMAG00000007282	cstf3	93	82.583	ENSFALG00000010764	CSTF3	100	80.611	Ficedula_albicollis
ENSPMAG00000007282	cstf3	99	80.337	ENSFDAG00000012082	CSTF3	99	80.337	Fukomys_damarensis
ENSPMAG00000007282	cstf3	100	78.750	ENSFHEG00000020623	cstf3	99	79.155	Fundulus_heteroclitus
ENSPMAG00000007282	cstf3	100	77.701	ENSGMOG00000012275	cstf3	99	78.261	Gadus_morhua
ENSPMAG00000007282	cstf3	100	79.750	ENSGALG00000011685	CSTF3	99	80.337	Gallus_gallus
ENSPMAG00000007282	cstf3	100	78.750	ENSGAFG00000002181	cstf3	99	79.155	Gambusia_affinis
ENSPMAG00000007282	cstf3	99	79.325	ENSGACG00000015997	cstf3	99	79.155	Gasterosteus_aculeatus
ENSPMAG00000007282	cstf3	100	79.612	ENSGAGG00000006200	CSTF3	99	80.337	Gopherus_agassizii
ENSPMAG00000007282	cstf3	99	74.824	ENSGGOG00000026591	CSTF3	97	82.314	Gorilla_gorilla
ENSPMAG00000007282	cstf3	98	79.520	ENSHBUG00000016656	cstf3	99	79.296	Haplochromis_burtoni
ENSPMAG00000007282	cstf3	99	80.197	ENSHGLG00000017834	CSTF3	99	80.197	Heterocephalus_glaber_female
ENSPMAG00000007282	cstf3	99	80.197	ENSHGLG00100018042	CSTF3	99	80.197	Heterocephalus_glaber_male
ENSPMAG00000007282	cstf3	98	78.561	ENSHCOG00000015218	cstf3	99	78.310	Hippocampus_comes
ENSPMAG00000007282	cstf3	99	78.711	ENSIPUG00000013170	CSTF3	99	77.964	Ictalurus_punctatus
ENSPMAG00000007282	cstf3	99	80.337	ENSSTOG00000013306	CSTF3	99	80.337	Ictidomys_tridecemlineatus
ENSPMAG00000007282	cstf3	99	66.994	ENSJJAG00000018430	Cstf3	99	67.364	Jaculus_jaculus
ENSPMAG00000007282	cstf3	99	78.992	ENSKMAG00000010916	cstf3	99	78.852	Kryptolebias_marmoratus
ENSPMAG00000007282	cstf3	99	78.762	ENSLBEG00000002306	cstf3	99	78.672	Labrus_bergylta
ENSPMAG00000007282	cstf3	99	79.184	ENSLACG00000017296	CSTF3	100	78.611	Latimeria_chalumnae
ENSPMAG00000007282	cstf3	99	79.494	ENSLOCG00000004415	cstf3	99	79.044	Lepisosteus_oculatus
ENSPMAG00000007282	cstf3	99	80.197	ENSLAFG00000008712	CSTF3	99	80.197	Loxodonta_africana
ENSPMAG00000007282	cstf3	99	80.337	ENSMFAG00000029516	CSTF3	100	81.081	Macaca_fascicularis
ENSPMAG00000007282	cstf3	99	80.337	ENSMMUG00000002542	CSTF3	99	80.337	Macaca_mulatta
ENSPMAG00000007282	cstf3	99	80.337	ENSMNEG00000021807	CSTF3	100	81.081	Macaca_nemestrina
ENSPMAG00000007282	cstf3	99	80.337	ENSMLEG00000039594	CSTF3	97	85.366	Mandrillus_leucophaeus
ENSPMAG00000007282	cstf3	99	79.325	ENSMAMG00000020423	cstf3	99	79.014	Mastacembelus_armatus
ENSPMAG00000007282	cstf3	99	78.622	ENSMZEG00005012082	cstf3	99	79.296	Maylandia_zebra
ENSPMAG00000007282	cstf3	100	79.750	ENSMGAG00000001383	CSTF3	100	79.722	Meleagris_gallopavo
ENSPMAG00000007282	cstf3	99	80.168	ENSMAUG00000002487	Cstf3	99	80.168	Mesocricetus_auratus
ENSPMAG00000007282	cstf3	99	80.197	ENSMICG00000004784	CSTF3	100	80.922	Microcebus_murinus
ENSPMAG00000007282	cstf3	99	80.307	ENSMOCG00000017583	Cstf3	99	80.307	Microtus_ochrogaster
ENSPMAG00000007282	cstf3	99	78.442	ENSMMOG00000016026	cstf3	96	78.056	Mola_mola
ENSPMAG00000007282	cstf3	99	73.713	ENSMODG00000025205	-	99	73.713	Monodelphis_domestica
ENSPMAG00000007282	cstf3	99	79.580	ENSMODG00000009745	-	99	80.028	Monodelphis_domestica
ENSPMAG00000007282	cstf3	100	78.750	ENSMALG00000012050	cstf3	99	79.014	Monopterus_albus
ENSPMAG00000007282	cstf3	99	80.307	MGP_CAROLIEiJ_G0024026	Cstf3	99	80.307	Mus_caroli
ENSPMAG00000007282	cstf3	99	80.307	ENSMUSG00000027176	Cstf3	99	80.307	Mus_musculus
ENSPMAG00000007282	cstf3	99	80.307	MGP_PahariEiJ_G0025464	Cstf3	99	80.307	Mus_pahari
ENSPMAG00000007282	cstf3	99	80.307	MGP_SPRETEiJ_G0024939	Cstf3	99	80.307	Mus_spretus
ENSPMAG00000007282	cstf3	99	80.197	ENSMPUG00000011457	CSTF3	99	80.197	Mustela_putorius_furo
ENSPMAG00000007282	cstf3	99	78.652	ENSMLUG00000026022	-	99	78.492	Myotis_lucifugus
ENSPMAG00000007282	cstf3	100	78.889	ENSMLUG00000003073	-	100	79.334	Myotis_lucifugus
ENSPMAG00000007282	cstf3	99	80.478	ENSNGAG00000010677	Cstf3	99	80.478	Nannospalax_galili
ENSPMAG00000007282	cstf3	87	80.255	ENSNBRG00000007345	cstf3	100	80.064	Neolamprologus_brichardi
ENSPMAG00000007282	cstf3	99	80.337	ENSNLEG00000017901	CSTF3	98	84.498	Nomascus_leucogenys
ENSPMAG00000007282	cstf3	73	81.939	ENSMEUG00000005640	-	100	81.939	Notamacropus_eugenii
ENSPMAG00000007282	cstf3	67	78.547	ENSOPRG00000000199	-	67	78.547	Ochotona_princeps
ENSPMAG00000007282	cstf3	86	72.419	ENSODEG00000006311	-	95	72.419	Octodon_degus
ENSPMAG00000007282	cstf3	99	80.337	ENSODEG00000016737	-	99	80.337	Octodon_degus
ENSPMAG00000007282	cstf3	98	79.520	ENSONIG00000005563	cstf3	99	79.296	Oreochromis_niloticus
ENSPMAG00000007282	cstf3	90	79.294	ENSOANG00000015140	CSTF3	99	79.786	Ornithorhynchus_anatinus
ENSPMAG00000007282	cstf3	99	79.747	ENSOCUG00000015417	CSTF3	99	80.056	Oryctolagus_cuniculus
ENSPMAG00000007282	cstf3	98	79.408	ENSORLG00000009762	cstf3	99	79.096	Oryzias_latipes
ENSPMAG00000007282	cstf3	98	79.408	ENSORLG00020005540	cstf3	99	79.096	Oryzias_latipes_hni
ENSPMAG00000007282	cstf3	98	79.549	ENSORLG00015003551	cstf3	99	79.237	Oryzias_latipes_hsok
ENSPMAG00000007282	cstf3	98	78.843	ENSOMEG00000003848	cstf3	99	78.531	Oryzias_melastigma
ENSPMAG00000007282	cstf3	99	79.109	ENSOGAG00000010229	CSTF3	99	79.555	Otolemur_garnettii
ENSPMAG00000007282	cstf3	90	80.341	ENSOARG00000017271	CSTF3	99	80.835	Ovis_aries
ENSPMAG00000007282	cstf3	99	77.856	ENSPPAG00000027358	CSTF3	99	77.856	Pan_paniscus
ENSPMAG00000007282	cstf3	99	80.337	ENSPPRG00000016852	CSTF3	99	80.337	Panthera_pardus
ENSPMAG00000007282	cstf3	99	80.337	ENSPTIG00000008716	CSTF3	99	80.337	Panthera_tigris_altaica
ENSPMAG00000007282	cstf3	99	80.337	ENSPTRG00000003485	CSTF3	99	80.337	Pan_troglodytes
ENSPMAG00000007282	cstf3	99	80.337	ENSPANG00000013722	CSTF3	97	85.366	Papio_anubis
ENSPMAG00000007282	cstf3	99	79.050	ENSPKIG00000023648	cstf3	99	78.911	Paramormyrops_kingsleyae
ENSPMAG00000007282	cstf3	100	79.612	ENSPSIG00000009173	CSTF3	99	80.337	Pelodiscus_sinensis
ENSPMAG00000007282	cstf3	76	85.846	ENSPMGG00000000164	cstf3	99	85.846	Periophthalmus_magnuspinnatus
ENSPMAG00000007282	cstf3	99	79.720	ENSPEMG00000011481	Cstf3	99	80.168	Peromyscus_maniculatus_bairdii
ENSPMAG00000007282	cstf3	99	69.803	ENSPCIG00000030419	-	90	69.499	Phascolarctos_cinereus
ENSPMAG00000007282	cstf3	100	77.424	ENSPCIG00000026406	-	100	80.922	Phascolarctos_cinereus
ENSPMAG00000007282	cstf3	100	78.889	ENSPFOG00000017239	cstf3	99	79.296	Poecilia_formosa
ENSPMAG00000007282	cstf3	100	79.028	ENSPLAG00000009456	cstf3	99	79.437	Poecilia_latipinna
ENSPMAG00000007282	cstf3	100	78.889	ENSPMEG00000010320	cstf3	99	79.296	Poecilia_mexicana
ENSPMAG00000007282	cstf3	100	78.889	ENSPREG00000013549	cstf3	99	79.296	Poecilia_reticulata
ENSPMAG00000007282	cstf3	99	80.337	ENSPPYG00000003375	CSTF3	99	80.337	Pongo_abelii
ENSPMAG00000007282	cstf3	71	89.619	ENSPCAG00000008025	-	71	89.619	Procavia_capensis
ENSPMAG00000007282	cstf3	99	75.246	ENSPCOG00000014417	CSTF3	99	75.702	Propithecus_coquereli
ENSPMAG00000007282	cstf3	99	75.246	ENSPVAG00000002350	CSTF3	99	75.702	Pteropus_vampyrus
ENSPMAG00000007282	cstf3	99	78.622	ENSPNYG00000018259	cstf3	99	79.296	Pundamilia_nyererei
ENSPMAG00000007282	cstf3	99	79.213	ENSPNAG00000020182	cstf3	99	79.073	Pygocentrus_nattereri
ENSPMAG00000007282	cstf3	87	81.081	ENSRNOG00000012089	Cstf3	100	81.081	Rattus_norvegicus
ENSPMAG00000007282	cstf3	99	78.903	ENSRBIG00000044258	CSTF3	100	81.081	Rhinopithecus_bieti
ENSPMAG00000007282	cstf3	99	80.337	ENSRROG00000043450	CSTF3	100	81.081	Rhinopithecus_roxellana
ENSPMAG00000007282	cstf3	99	80.337	ENSSBOG00000024764	CSTF3	99	86.026	Saimiri_boliviensis_boliviensis
ENSPMAG00000007282	cstf3	99	79.747	ENSSHAG00000018128	-	99	80.197	Sarcophilus_harrisii
ENSPMAG00000007282	cstf3	99	74.583	ENSSHAG00000003135	-	99	74.234	Sarcophilus_harrisii
ENSPMAG00000007282	cstf3	99	79.494	ENSSFOG00015022133	cstf3	99	79.354	Scleropages_formosus
ENSPMAG00000007282	cstf3	100	78.750	ENSSMAG00000002197	cstf3	96	83.228	Scophthalmus_maximus
ENSPMAG00000007282	cstf3	100	78.750	ENSSDUG00000020426	cstf3	99	79.155	Seriola_dumerili
ENSPMAG00000007282	cstf3	100	78.750	ENSSLDG00000025649	cstf3	100	78.273	Seriola_lalandi_dorsalis
ENSPMAG00000007282	cstf3	99	79.606	ENSSARG00000000391	CSTF3	99	80.056	Sorex_araneus
ENSPMAG00000007282	cstf3	96	79.856	ENSSPUG00000010546	CSTF3	100	79.856	Sphenodon_punctatus
ENSPMAG00000007282	cstf3	100	78.889	ENSSPAG00000004958	cstf3	99	79.296	Stegastes_partitus
ENSPMAG00000007282	cstf3	99	79.888	ENSSSCG00000040954	CSTF3	99	80.197	Sus_scrofa
ENSPMAG00000007282	cstf3	98	80.704	ENSTGUG00000005010	CSTF3	99	80.563	Taeniopygia_guttata
ENSPMAG00000007282	cstf3	99	78.762	ENSTRUG00000004959	cstf3	99	78.592	Takifugu_rubripes
ENSPMAG00000007282	cstf3	99	79.044	ENSTNIG00000013811	cstf3	98	78.873	Tetraodon_nigroviridis
ENSPMAG00000007282	cstf3	90	78.947	ENSTBEG00000001544	CSTF3	90	78.947	Tupaia_belangeri
ENSPMAG00000007282	cstf3	99	77.528	ENSTTRG00000016366	CSTF3	99	77.247	Tursiops_truncatus
ENSPMAG00000007282	cstf3	99	79.606	ENSUMAG00000018971	CSTF3	100	80.763	Ursus_maritimus
ENSPMAG00000007282	cstf3	99	80.197	ENSVPAG00000007800	CSTF3	99	80.197	Vicugna_pacos
ENSPMAG00000007282	cstf3	99	79.887	ENSVVUG00000014938	CSTF3	100	81.081	Vulpes_vulpes
ENSPMAG00000007282	cstf3	67	38.525	ENSXETG00000017946	-	99	38.716	Xenopus_tropicalis
ENSPMAG00000007282	cstf3	86	68.650	ENSXETG00000021399	cstf3	96	70.067	Xenopus_tropicalis
ENSPMAG00000007282	cstf3	87	79.936	ENSXCOG00000011741	cstf3	100	79.745	Xiphophorus_couchianus
ENSPMAG00000007282	cstf3	100	78.889	ENSXMAG00000009545	cstf3	99	79.296	Xiphophorus_maculatus