EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000007451 (Gene tree)
Gene ID: -
Gene Symbol: lsg1
Alias: -
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 43787 bases
Position: chrGL476891:318608-362394
Accession: ZDB-GENE-030131-2184
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000008225	MMR_HSR1	PF01926.23	2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000008263	-	1995	-	ENSPMAP00000008225	664 (aa)	-	S4RSN5

Gene Model

Click here to download ENSPMAG00000007451's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000007451's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000007451	lsg1	99	59.765	ENSG00000041802	LSG1	98	67.816	Homo_sapiens
ENSPMAG00000007451	lsg1	99	58.471	ENSAPOG00000009694	lsg1	99	59.187	Acanthochromis_polyacanthus
ENSPMAG00000007451	lsg1	99	57.755	ENSAMEG00000009343	LSG1	99	57.081	Ailuropoda_melanoleuca
ENSPMAG00000007451	lsg1	98	60.429	ENSACIG00000012406	lsg1	99	60.902	Amphilophus_citrinellus
ENSPMAG00000007451	lsg1	99	58.657	ENSAOCG00000016066	lsg1	99	59.398	Amphiprion_ocellaris
ENSPMAG00000007451	lsg1	99	59.104	ENSAPEG00000003252	lsg1	99	60.241	Amphiprion_percula
ENSPMAG00000007451	lsg1	98	60.725	ENSATEG00000011794	lsg1	99	60.741	Anabas_testudineus
ENSPMAG00000007451	lsg1	95	60.563	ENSACAG00000004222	LSG1	99	60.563	Anolis_carolinensis
ENSPMAG00000007451	lsg1	99	60.146	ENSANAG00000021153	LSG1	99	60.232	Aotus_nancymaae
ENSPMAG00000007451	lsg1	99	59.940	ENSACLG00000000520	lsg1	99	59.496	Astatotilapia_calliptera
ENSPMAG00000007451	lsg1	100	60.266	ENSAMXG00000008271	lsg1	100	61.310	Astyanax_mexicanus
ENSPMAG00000007451	lsg1	99	58.601	ENSBTAG00000008461	LSG1	99	59.071	Bos_taurus
ENSPMAG00000007451	lsg1	69	47.248	WBGene00016907	C53H9.2	88	56.557	Caenorhabditis_elegans
ENSPMAG00000007451	lsg1	99	60.059	ENSCJAG00000013962	LSG1	99	60.565	Callithrix_jacchus
ENSPMAG00000007451	lsg1	95	59.876	ENSCAFG00000013445	LSG1	99	59.876	Canis_familiaris
ENSPMAG00000007451	lsg1	99	58.902	ENSCAFG00020002216	LSG1	99	59.591	Canis_lupus_dingo
ENSPMAG00000007451	lsg1	99	58.926	ENSCHIG00000015769	LSG1	99	60.209	Capra_hircus
ENSPMAG00000007451	lsg1	99	59.941	ENSTSYG00000001447	LSG1	99	59.941	Carlito_syrichta
ENSPMAG00000007451	lsg1	95	58.307	ENSCAPG00000009856	LSG1	99	58.165	Cavia_aperea
ENSPMAG00000007451	lsg1	99	58.978	ENSCCAG00000035744	LSG1	99	59.071	Cebus_capucinus
ENSPMAG00000007451	lsg1	99	60.499	ENSCATG00000042060	LSG1	99	59.618	Cercocebus_atys
ENSPMAG00000007451	lsg1	99	60.352	ENSCSAG00000008796	LSG1	92	60.646	Chlorocebus_sabaeus
ENSPMAG00000007451	lsg1	99	61.004	ENSCPBG00000015941	LSG1	83	61.095	Chrysemys_picta_bellii
ENSPMAG00000007451	lsg1	67	62.887	ENSCING00000007079	-	94	62.887	Ciona_intestinalis
ENSPMAG00000007451	lsg1	67	63.265	ENSCSAVG00000002514	-	89	63.265	Ciona_savignyi
ENSPMAG00000007451	lsg1	99	60.499	ENSCANG00000030709	LSG1	99	60.793	Colobus_angolensis_palliatus
ENSPMAG00000007451	lsg1	99	59.731	ENSCGRG00001019846	Lsg1	99	60.329	Cricetulus_griseus_chok1gshd
ENSPMAG00000007451	lsg1	99	59.731	ENSCGRG00000014617	Lsg1	99	60.329	Cricetulus_griseus_crigri
ENSPMAG00000007451	lsg1	98	59.970	ENSCSEG00000008522	lsg1	99	60.000	Cynoglossus_semilaevis
ENSPMAG00000007451	lsg1	98	60.676	ENSCVAG00000002484	lsg1	99	61.019	Cyprinodon_variegatus
ENSPMAG00000007451	lsg1	99	62.669	ENSDARG00000015352	lsg1	99	62.946	Danio_rerio
ENSPMAG00000007451	lsg1	99	58.990	ENSDNOG00000006224	LSG1	99	59.104	Dasypus_novemcinctus
ENSPMAG00000007451	lsg1	82	60.744	FBgn0266284	Ns3	99	46.786	Drosophila_melanogaster
ENSPMAG00000007451	lsg1	88	69.333	ENSETEG00000003888	LSG1	89	69.333	Echinops_telfairi
ENSPMAG00000007451	lsg1	89	58.306	ENSEBUG00000003119	lsg1	85	58.306	Eptatretus_burgeri
ENSPMAG00000007451	lsg1	99	60.889	ENSEASG00005000678	LSG1	99	61.218	Equus_asinus_asinus
ENSPMAG00000007451	lsg1	99	60.593	ENSECAG00000017659	LSG1	99	60.921	Equus_caballus
ENSPMAG00000007451	lsg1	86	53.333	ENSEEUG00000015217	LSG1	87	53.333	Erinaceus_europaeus
ENSPMAG00000007451	lsg1	99	59.248	ENSELUG00000023973	lsg1	99	59.520	Esox_lucius
ENSPMAG00000007451	lsg1	99	58.737	ENSFCAG00000024957	LSG1	99	58.621	Felis_catus
ENSPMAG00000007451	lsg1	93	60.287	ENSFALG00000007210	LSG1	94	60.287	Ficedula_albicollis
ENSPMAG00000007451	lsg1	99	59.248	ENSFDAG00000017373	LSG1	99	59.762	Fukomys_damarensis
ENSPMAG00000007451	lsg1	98	59.850	ENSFHEG00000003680	lsg1	99	59.325	Fundulus_heteroclitus
ENSPMAG00000007451	lsg1	84	67.500	ENSGMOG00000015834	lsg1	99	56.652	Gadus_morhua
ENSPMAG00000007451	lsg1	100	58.445	ENSGALG00000007058	LSG1	87	58.929	Gallus_gallus
ENSPMAG00000007451	lsg1	98	61.162	ENSGAFG00000015831	lsg1	99	61.045	Gambusia_affinis
ENSPMAG00000007451	lsg1	98	58.788	ENSGACG00000009323	lsg1	99	58.841	Gasterosteus_aculeatus
ENSPMAG00000007451	lsg1	99	59.618	ENSGGOG00000000520	LSG1	99	59.912	Gorilla_gorilla
ENSPMAG00000007451	lsg1	99	59.940	ENSHBUG00000005659	lsg1	99	60.538	Haplochromis_burtoni
ENSPMAG00000007451	lsg1	99	58.702	ENSHGLG00000017390	LSG1	99	59.463	Heterocephalus_glaber_female
ENSPMAG00000007451	lsg1	99	58.702	ENSHGLG00100018587	LSG1	99	59.463	Heterocephalus_glaber_male
ENSPMAG00000007451	lsg1	98	61.468	ENSHCOG00000016848	lsg1	99	61.493	Hippocampus_comes
ENSPMAG00000007451	lsg1	99	61.584	ENSIPUG00000008631	lsg1	99	62.725	Ictalurus_punctatus
ENSPMAG00000007451	lsg1	76	54.776	ENSSTOG00000010234	LSG1	92	55.299	Ictidomys_tridecemlineatus
ENSPMAG00000007451	lsg1	99	59.639	ENSJJAG00000015513	Lsg1	99	59.145	Jaculus_jaculus
ENSPMAG00000007451	lsg1	98	59.509	ENSKMAG00000009681	lsg1	99	59.549	Kryptolebias_marmoratus
ENSPMAG00000007451	lsg1	98	59.939	ENSLBEG00000024261	lsg1	99	60.420	Labrus_bergylta
ENSPMAG00000007451	lsg1	99	60.921	ENSLACG00000013399	LSG1	99	61.435	Latimeria_chalumnae
ENSPMAG00000007451	lsg1	98	62.387	ENSLOCG00000004918	lsg1	99	62.777	Lepisosteus_oculatus
ENSPMAG00000007451	lsg1	99	59.407	ENSLAFG00000012919	-	99	59.471	Loxodonta_africana
ENSPMAG00000007451	lsg1	99	60.499	ENSMFAG00000039903	LSG1	99	59.618	Macaca_fascicularis
ENSPMAG00000007451	lsg1	99	60.499	ENSMMUG00000010708	LSG1	99	60.793	Macaca_mulatta
ENSPMAG00000007451	lsg1	99	60.499	ENSMNEG00000031538	LSG1	99	59.471	Macaca_nemestrina
ENSPMAG00000007451	lsg1	99	60.499	ENSMLEG00000041184	LSG1	99	60.793	Mandrillus_leucophaeus
ENSPMAG00000007451	lsg1	99	59.342	ENSMAMG00000000470	lsg1	99	59.342	Mastacembelus_armatus
ENSPMAG00000007451	lsg1	99	59.940	ENSMZEG00005017865	lsg1	99	60.538	Maylandia_zebra
ENSPMAG00000007451	lsg1	89	59.766	ENSMGAG00000007050	LSG1	100	60.133	Meleagris_gallopavo
ENSPMAG00000007451	lsg1	95	57.547	ENSMAUG00000016976	Lsg1	96	58.176	Mesocricetus_auratus
ENSPMAG00000007451	lsg1	99	59.520	ENSMICG00000049087	LSG1	99	59.431	Microcebus_murinus
ENSPMAG00000007451	lsg1	99	58.832	ENSMOCG00000022136	Lsg1	99	58.982	Microtus_ochrogaster
ENSPMAG00000007451	lsg1	83	67.227	ENSMMOG00000008884	lsg1	99	64.526	Mola_mola
ENSPMAG00000007451	lsg1	99	52.741	ENSMODG00000019828	LSG1	99	53.892	Monodelphis_domestica
ENSPMAG00000007451	lsg1	99	59.398	MGP_CAROLIEiJ_G0020648	Lsg1	99	60.210	Mus_caroli
ENSPMAG00000007451	lsg1	99	59.248	ENSMUSG00000022538	Lsg1	99	59.699	Mus_musculus
ENSPMAG00000007451	lsg1	99	59.607	MGP_PahariEiJ_G0016352	Lsg1	99	59.791	Mus_pahari
ENSPMAG00000007451	lsg1	99	59.699	MGP_SPRETEiJ_G0021544	Lsg1	99	60.000	Mus_spretus
ENSPMAG00000007451	lsg1	99	58.122	ENSMPUG00000003734	LSG1	99	58.074	Mustela_putorius_furo
ENSPMAG00000007451	lsg1	99	59.556	ENSMLUG00000012548	LSG1	99	60.059	Myotis_lucifugus
ENSPMAG00000007451	lsg1	99	57.721	ENSNGAG00000021872	Lsg1	99	57.292	Nannospalax_galili
ENSPMAG00000007451	lsg1	99	59.618	ENSNLEG00000008293	LSG1	99	59.912	Nomascus_leucogenys
ENSPMAG00000007451	lsg1	69	60.825	ENSMEUG00000009041	-	84	60.825	Notamacropus_eugenii
ENSPMAG00000007451	lsg1	99	60.209	ENSONIG00000002635	lsg1	99	60.386	Oreochromis_niloticus
ENSPMAG00000007451	lsg1	95	63.438	ENSOANG00000012742	LSG1	99	63.438	Ornithorhynchus_anatinus
ENSPMAG00000007451	lsg1	99	59.435	ENSOCUG00000004817	LSG1	99	59.435	Oryctolagus_cuniculus
ENSPMAG00000007451	lsg1	98	60.518	ENSORLG00000007695	lsg1	99	60.538	Oryzias_latipes
ENSPMAG00000007451	lsg1	98	60.518	ENSORLG00020016286	lsg1	99	60.538	Oryzias_latipes_hni
ENSPMAG00000007451	lsg1	98	60.061	ENSORLG00015012025	lsg1	99	60.090	Oryzias_latipes_hsok
ENSPMAG00000007451	lsg1	98	58.699	ENSOMEG00000022379	lsg1	99	58.754	Oryzias_melastigma
ENSPMAG00000007451	lsg1	99	59.479	ENSOGAG00000003475	LSG1	99	59.334	Otolemur_garnettii
ENSPMAG00000007451	lsg1	99	58.661	ENSOARG00000020403	LSG1	99	59.012	Ovis_aries
ENSPMAG00000007451	lsg1	99	60.352	ENSPPAG00000029271	LSG1	99	60.352	Pan_paniscus
ENSPMAG00000007451	lsg1	99	58.150	ENSPPRG00000010281	LSG1	99	58.150	Panthera_pardus
ENSPMAG00000007451	lsg1	99	58.407	ENSPTIG00000010789	LSG1	99	58.407	Panthera_tigris_altaica
ENSPMAG00000007451	lsg1	99	59.912	ENSPTRG00000015760	LSG1	99	59.912	Pan_troglodytes
ENSPMAG00000007451	lsg1	99	59.912	ENSPANG00000018249	LSG1	99	59.031	Papio_anubis
ENSPMAG00000007451	lsg1	99	60.060	ENSPKIG00000002895	lsg1	99	60.896	Paramormyrops_kingsleyae
ENSPMAG00000007451	lsg1	96	58.040	ENSPSIG00000009821	LSG1	99	58.040	Pelodiscus_sinensis
ENSPMAG00000007451	lsg1	95	60.720	ENSPMGG00000000931	lsg1	99	60.720	Periophthalmus_magnuspinnatus
ENSPMAG00000007451	lsg1	99	59.821	ENSPEMG00000012082	-	99	59.559	Peromyscus_maniculatus_bairdii
ENSPMAG00000007451	lsg1	98	59.278	ENSPCIG00000013890	LSG1	81	59.788	Phascolarctos_cinereus
ENSPMAG00000007451	lsg1	98	61.162	ENSPFOG00000021882	lsg1	99	61.194	Poecilia_formosa
ENSPMAG00000007451	lsg1	98	60.703	ENSPLAG00000019536	lsg1	99	60.746	Poecilia_latipinna
ENSPMAG00000007451	lsg1	98	60.366	ENSPMEG00000017281	lsg1	99	60.417	Poecilia_mexicana
ENSPMAG00000007451	lsg1	98	52.018	ENSPREG00000006048	lsg1	99	52.855	Poecilia_reticulata
ENSPMAG00000007451	lsg1	92	59.248	ENSPPYG00000014425	LSG1	100	59.248	Pongo_abelii
ENSPMAG00000007451	lsg1	90	65.333	ENSPCAG00000005511	LSG1	90	65.333	Procavia_capensis
ENSPMAG00000007451	lsg1	99	59.070	ENSPCOG00000012360	LSG1	99	59.220	Propithecus_coquereli
ENSPMAG00000007451	lsg1	99	59.940	ENSPNYG00000021994	lsg1	99	59.496	Pundamilia_nyererei
ENSPMAG00000007451	lsg1	99	61.642	ENSPNAG00000015533	lsg1	99	61.642	Pygocentrus_nattereri
ENSPMAG00000007451	lsg1	99	59.342	ENSRNOG00000001727	Lsg1	99	60.239	Rattus_norvegicus
ENSPMAG00000007451	lsg1	99	59.940	ENSRBIG00000029053	LSG1	99	59.275	Rhinopithecus_bieti
ENSPMAG00000007451	lsg1	99	59.940	ENSRROG00000037702	LSG1	99	59.275	Rhinopithecus_roxellana
ENSPMAG00000007451	lsg1	66	57.059	YGL099W	LSG1	75	39.432	Saccharomyces_cerevisiae
ENSPMAG00000007451	lsg1	99	59.942	ENSSBOG00000034938	LSG1	99	60.029	Saimiri_boliviensis_boliviensis
ENSPMAG00000007451	lsg1	78	58.724	ENSSHAG00000003487	LSG1	99	58.912	Sarcophilus_harrisii
ENSPMAG00000007451	lsg1	98	61.840	ENSSFOG00015008955	lsg1	100	62.369	Scleropages_formosus
ENSPMAG00000007451	lsg1	98	60.395	ENSSDUG00000004622	lsg1	99	60.180	Seriola_dumerili
ENSPMAG00000007451	lsg1	98	60.030	ENSSLDG00000010869	lsg1	99	60.060	Seriola_lalandi_dorsalis
ENSPMAG00000007451	lsg1	82	60.000	ENSSARG00000012981	LSG1	84	58.221	Sorex_araneus
ENSPMAG00000007451	lsg1	99	60.320	ENSSPUG00000016347	LSG1	99	60.320	Sphenodon_punctatus
ENSPMAG00000007451	lsg1	99	59.036	ENSSPAG00000005508	lsg1	99	59.639	Stegastes_partitus
ENSPMAG00000007451	lsg1	99	57.895	ENSSSCG00000011827	LSG1	99	58.408	Sus_scrofa
ENSPMAG00000007451	lsg1	89	58.007	ENSTGUG00000009068	LSG1	99	58.949	Taeniopygia_guttata
ENSPMAG00000007451	lsg1	98	55.891	ENSTRUG00000017380	lsg1	99	56.112	Takifugu_rubripes
ENSPMAG00000007451	lsg1	98	60.643	ENSTNIG00000015570	lsg1	99	60.479	Tetraodon_nigroviridis
ENSPMAG00000007451	lsg1	91	60.141	ENSTTRG00000000559	LSG1	91	60.141	Tursiops_truncatus
ENSPMAG00000007451	lsg1	99	58.780	ENSUAMG00000012454	LSG1	99	58.457	Ursus_americanus
ENSPMAG00000007451	lsg1	99	58.780	ENSUMAG00000000855	LSG1	99	58.457	Ursus_maritimus
ENSPMAG00000007451	lsg1	95	56.082	ENSVPAG00000012400	LSG1	99	56.082	Vicugna_pacos
ENSPMAG00000007451	lsg1	95	58.998	ENSVVUG00000008956	LSG1	97	58.998	Vulpes_vulpes
ENSPMAG00000007451	lsg1	99	60.090	ENSXETG00000003451	lsg1	100	59.970	Xenopus_tropicalis
ENSPMAG00000007451	lsg1	98	60.518	ENSXCOG00000003239	lsg1	99	60.417	Xiphophorus_couchianus
ENSPMAG00000007451	lsg1	98	59.021	ENSXMAG00000005536	lsg1	99	60.350	Xiphophorus_maculatus