EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSPMAG00000007492 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 3579 bases
Position: chrGL477891:43090-46668
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000008240	zf-C2H2	PF00096.26	3.5e-21	1	3
ENSPMAP00000008240	zf-C2H2	PF00096.26	3.5e-21	2	3
ENSPMAP00000008240	zf-C2H2	PF00096.26	3.5e-21	3	3
ENSPMAP00000008240	zf-met	PF12874.7	7.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000008278	-	486	-	ENSPMAP00000008240	162 (aa)	-	S4RSQ0

Gene Model

Click here to download ENSPMAG00000007492's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000007492's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMAG00000007492	-	78	36.364	ENSPMAG00000002022	-	78	36.364
ENSPMAG00000007492	-	82	33.333	ENSPMAG00000005692	-	63	33.333
ENSPMAG00000007492	-	90	34.483	ENSPMAG00000005248	prdm5	99	34.483
ENSPMAG00000007492	-	92	40.594	ENSPMAG00000003606	-	68	40.594
ENSPMAG00000007492	-	86	40.625	ENSPMAG00000007084	-	100	40.625
ENSPMAG00000007492	-	86	38.060	ENSPMAG00000004189	-	98	38.060
ENSPMAG00000007492	-	86	38.806	ENSPMAG00000008196	-	100	38.806
ENSPMAG00000007492	-	88	37.500	ENSPMAG00000001294	-	99	37.500
ENSPMAG00000007492	-	86	35.455	ENSPMAG00000006066	znf366	81	35.455
ENSPMAG00000007492	-	86	31.298	ENSPMAG00000008879	-	98	31.298
ENSPMAG00000007492	-	94	35.766	ENSPMAG00000007983	-	97	35.766
ENSPMAG00000007492	-	88	39.823	ENSPMAG00000007500	ZNF436	98	40.541
ENSPMAG00000007492	-	87	36.066	ENSPMAG00000007731	-	94	36.066
ENSPMAG00000007492	-	89	38.202	ENSPMAG00000000706	-	100	38.202
ENSPMAG00000007492	-	74	43.750	ENSPMAG00000000839	-	93	43.750
ENSPMAG00000007492	-	99	34.959	ENSPMAG00000006198	ZBTB47	54	35.455
ENSPMAG00000007492	-	86	38.462	ENSPMAG00000000401	-	86	38.462
ENSPMAG00000007492	-	90	38.182	ENSPMAG00000000404	-	56	38.182
ENSPMAG00000007492	-	83	34.615	ENSPMAG00000008691	-	95	34.615
ENSPMAG00000007492	-	86	41.758	ENSPMAG00000004344	-	95	41.758