EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000007493 (Gene tree)
Gene ID: -
Gene Symbol: rrp12
Alias: -
Full Name: ribosomal RNA processing 12 homolog
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 28960 bases
Position: chrGL476543:81124-110083
Accession: ZDB-GENE-050706-182
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000008297	NUC173	PF08161.12	1.1e-67	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000008335	-	3906	-	ENSPMAP00000008297	1302 (aa)	-	S4RSV7

Gene Model

Click here to download ENSPMAG00000007493's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000007493's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000007493	rrp12	97	55.682	ENSG00000052749	RRP12	100	65.625	Homo_sapiens
ENSPMAG00000007493	rrp12	87	51.687	ENSAPOG00000013355	rrp12	88	51.687	Acanthochromis_polyacanthus
ENSPMAG00000007493	rrp12	82	56.870	ENSAMEG00000000134	RRP12	82	56.870	Ailuropoda_melanoleuca
ENSPMAG00000007493	rrp12	88	52.117	ENSACIG00000022673	rrp12	99	46.206	Amphilophus_citrinellus
ENSPMAG00000007493	rrp12	99	46.037	ENSAOCG00000016149	rrp12	89	51.089	Amphiprion_ocellaris
ENSPMAG00000007493	rrp12	99	46.201	ENSAPEG00000016023	rrp12	99	45.217	Amphiprion_percula
ENSPMAG00000007493	rrp12	99	46.288	ENSATEG00000022627	rrp12	83	54.839	Anabas_testudineus
ENSPMAG00000007493	rrp12	81	50.758	ENSAPLG00000014387	RRP12	86	50.875	Anas_platyrhynchos
ENSPMAG00000007493	rrp12	87	56.361	ENSACAG00000002175	RRP12	82	56.361	Anolis_carolinensis
ENSPMAG00000007493	rrp12	83	55.341	ENSANAG00000037485	RRP12	99	55.682	Aotus_nancymaae
ENSPMAG00000007493	rrp12	88	51.961	ENSACLG00000007354	rrp12	89	52.226	Astatotilapia_calliptera
ENSPMAG00000007493	rrp12	99	45.094	ENSAMXG00000012852	rrp12	99	44.778	Astyanax_mexicanus
ENSPMAG00000007493	rrp12	97	54.696	ENSBTAG00000002191	RRP12	99	54.054	Bos_taurus
ENSPMAG00000007493	rrp12	68	52.993	ENSCJAG00000016549	-	99	44.828	Callithrix_jacchus
ENSPMAG00000007493	rrp12	82	56.429	ENSCAFG00000009043	RRP12	82	56.429	Canis_familiaris
ENSPMAG00000007493	rrp12	82	56.429	ENSCAFG00020005991	RRP12	82	56.429	Canis_lupus_dingo
ENSPMAG00000007493	rrp12	80	55.647	ENSCHIG00000011876	RRP12	82	55.647	Capra_hircus
ENSPMAG00000007493	rrp12	78	51.454	ENSCAPG00000008991	RRP12	79	51.454	Cavia_aperea
ENSPMAG00000007493	rrp12	82	57.228	ENSCPOG00000004215	RRP12	82	57.228	Cavia_porcellus
ENSPMAG00000007493	rrp12	70	54.653	ENSCCAG00000024088	RRP12	87	54.653	Cebus_capucinus
ENSPMAG00000007493	rrp12	56	50.203	ENSCCAG00000033123	-	83	41.890	Cebus_capucinus
ENSPMAG00000007493	rrp12	99	46.366	ENSCATG00000045310	RRP12	99	46.295	Cercocebus_atys
ENSPMAG00000007493	rrp12	82	57.160	ENSCLAG00000003753	RRP12	83	57.160	Chinchilla_lanigera
ENSPMAG00000007493	rrp12	74	54.058	ENSCSAG00000005877	RRP12	83	54.058	Chlorocebus_sabaeus
ENSPMAG00000007493	rrp12	55	59.567	ENSCHOG00000003095	-	58	59.567	Choloepus_hoffmanni
ENSPMAG00000007493	rrp12	75	59.628	ENSCPBG00000011935	RRP12	78	59.628	Chrysemys_picta_bellii
ENSPMAG00000007493	rrp12	92	61.842	ENSCANG00000031653	RRP12	99	45.149	Colobus_angolensis_palliatus
ENSPMAG00000007493	rrp12	73	56.443	ENSCGRG00001004338	Rrp12	80	56.443	Cricetulus_griseus_chok1gshd
ENSPMAG00000007493	rrp12	82	55.476	ENSCGRG00000011965	Rrp12	82	55.476	Cricetulus_griseus_crigri
ENSPMAG00000007493	rrp12	88	51.407	ENSCSEG00000007799	rrp12	88	51.407	Cynoglossus_semilaevis
ENSPMAG00000007493	rrp12	87	52.941	ENSCVAG00000003418	rrp12	89	52.941	Cyprinodon_variegatus
ENSPMAG00000007493	rrp12	79	54.589	ENSDARG00000022410	rrp12	99	45.991	Danio_rerio
ENSPMAG00000007493	rrp12	79	57.587	ENSDNOG00000005120	RRP12	82	57.587	Dasypus_novemcinctus
ENSPMAG00000007493	rrp12	100	47.380	ENSDORG00000009199	Rrp12	100	47.099	Dipodomys_ordii
ENSPMAG00000007493	rrp12	80	31.618	FBgn0030504	CG2691	83	30.000	Drosophila_melanogaster
ENSPMAG00000007493	rrp12	72	51.286	ENSETEG00000002455	RRP12	72	51.286	Echinops_telfairi
ENSPMAG00000007493	rrp12	75	67.797	ENSEBUG00000006555	rrp12	85	67.797	Eptatretus_burgeri
ENSPMAG00000007493	rrp12	80	57.467	ENSEASG00005008693	RRP12	99	47.396	Equus_asinus_asinus
ENSPMAG00000007493	rrp12	77	56.313	ENSECAG00000010892	RRP12	99	47.538	Equus_caballus
ENSPMAG00000007493	rrp12	69	42.985	ENSEEUG00000005447	-	69	46.875	Erinaceus_europaeus
ENSPMAG00000007493	rrp12	82	55.119	ENSELUG00000010510	rrp12	79	65.574	Esox_lucius
ENSPMAG00000007493	rrp12	80	56.429	ENSFCAG00000028639	RRP12	99	55.866	Felis_catus
ENSPMAG00000007493	rrp12	79	56.604	ENSFALG00000008458	RRP12	80	58.808	Ficedula_albicollis
ENSPMAG00000007493	rrp12	85	55.644	ENSFDAG00000019108	RRP12	95	47.237	Fukomys_damarensis
ENSPMAG00000007493	rrp12	81	49.464	ENSFHEG00000004148	rrp12	80	49.464	Fundulus_heteroclitus
ENSPMAG00000007493	rrp12	82	50.656	ENSGMOG00000004188	rrp12	82	50.656	Gadus_morhua
ENSPMAG00000007493	rrp12	82	59.118	ENSGALG00000041331	RRP12	79	59.118	Gallus_gallus
ENSPMAG00000007493	rrp12	99	45.565	ENSGAFG00000009038	rrp12	99	46.802	Gambusia_affinis
ENSPMAG00000007493	rrp12	81	54.167	ENSGACG00000007175	rrp12	82	54.167	Gasterosteus_aculeatus
ENSPMAG00000007493	rrp12	64	57.907	ENSGAGG00000019169	RRP12	94	57.770	Gopherus_agassizii
ENSPMAG00000007493	rrp12	97	55.682	ENSGGOG00000014850	RRP12	99	55.682	Gorilla_gorilla
ENSPMAG00000007493	rrp12	88	52.179	ENSHBUG00000023527	rrp12	89	52.443	Haplochromis_burtoni
ENSPMAG00000007493	rrp12	82	57.348	ENSHGLG00000016772	RRP12	83	57.348	Heterocephalus_glaber_female
ENSPMAG00000007493	rrp12	82	57.348	ENSHGLG00100015110	RRP12	83	57.348	Heterocephalus_glaber_male
ENSPMAG00000007493	rrp12	83	54.958	ENSHCOG00000019519	rrp12	82	54.958	Hippocampus_comes
ENSPMAG00000007493	rrp12	96	64.912	ENSIPUG00000000311	RRP12	98	64.912	Ictalurus_punctatus
ENSPMAG00000007493	rrp12	80	56.802	ENSSTOG00000006515	RRP12	83	56.802	Ictidomys_tridecemlineatus
ENSPMAG00000007493	rrp12	79	56.446	ENSJJAG00000000110	Rrp12	81	56.855	Jaculus_jaculus
ENSPMAG00000007493	rrp12	88	52.666	ENSKMAG00000020621	rrp12	89	52.666	Kryptolebias_marmoratus
ENSPMAG00000007493	rrp12	89	50.545	ENSLBEG00000015335	rrp12	89	50.545	Labrus_bergylta
ENSPMAG00000007493	rrp12	52	51.685	ENSLACG00000016633	RRP12	60	51.685	Latimeria_chalumnae
ENSPMAG00000007493	rrp12	99	45.386	ENSLOCG00000003846	rrp12	99	44.403	Lepisosteus_oculatus
ENSPMAG00000007493	rrp12	99	46.852	ENSLAFG00000015965	RRP12	99	46.727	Loxodonta_africana
ENSPMAG00000007493	rrp12	86	55.581	ENSMFAG00000041558	RRP12	99	55.682	Macaca_fascicularis
ENSPMAG00000007493	rrp12	86	55.581	ENSMMUG00000019634	RRP12	99	55.682	Macaca_mulatta
ENSPMAG00000007493	rrp12	86	55.239	ENSMNEG00000036759	RRP12	89	55.239	Macaca_nemestrina
ENSPMAG00000007493	rrp12	78	61.184	ENSMLEG00000041317	RRP12	99	44.776	Mandrillus_leucophaeus
ENSPMAG00000007493	rrp12	99	45.503	ENSMAMG00000002964	rrp12	82	55.370	Mastacembelus_armatus
ENSPMAG00000007493	rrp12	88	52.070	ENSMZEG00005003241	rrp12	89	52.334	Maylandia_zebra
ENSPMAG00000007493	rrp12	82	56.837	ENSMGAG00000009829	RRP12	82	56.837	Meleagris_gallopavo
ENSPMAG00000007493	rrp12	82	57.024	ENSMAUG00000020743	Rrp12	82	57.024	Mesocricetus_auratus
ENSPMAG00000007493	rrp12	87	57.245	ENSMICG00000007624	RRP12	82	57.245	Microcebus_murinus
ENSPMAG00000007493	rrp12	82	57.143	ENSMOCG00000006753	Rrp12	82	57.143	Microtus_ochrogaster
ENSPMAG00000007493	rrp12	99	46.241	ENSMMOG00000010708	rrp12	88	51.852	Mola_mola
ENSPMAG00000007493	rrp12	99	47.590	ENSMODG00000004315	RRP12	99	47.333	Monodelphis_domestica
ENSPMAG00000007493	rrp12	99	42.901	ENSMALG00000016560	rrp12	86	50.763	Monopterus_albus
ENSPMAG00000007493	rrp12	87	57.024	MGP_CAROLIEiJ_G0022957	Rrp12	99	47.498	Mus_caroli
ENSPMAG00000007493	rrp12	99	47.605	ENSMUSG00000035049	Rrp12	99	47.483	Mus_musculus
ENSPMAG00000007493	rrp12	99	47.641	MGP_PahariEiJ_G0014447	Rrp12	99	47.519	Mus_pahari
ENSPMAG00000007493	rrp12	99	47.681	MGP_SPRETEiJ_G0023878	Rrp12	99	47.558	Mus_spretus
ENSPMAG00000007493	rrp12	99	47.360	ENSMPUG00000017046	RRP12	99	47.515	Mustela_putorius_furo
ENSPMAG00000007493	rrp12	80	56.870	ENSMLUG00000017160	RRP12	82	57.007	Myotis_lucifugus
ENSPMAG00000007493	rrp12	81	56.511	ENSNGAG00000024144	Rrp12	82	56.511	Nannospalax_galili
ENSPMAG00000007493	rrp12	88	51.961	ENSNBRG00000009987	rrp12	89	52.226	Neolamprologus_brichardi
ENSPMAG00000007493	rrp12	97	55.682	ENSNLEG00000013762	RRP12	99	55.682	Nomascus_leucogenys
ENSPMAG00000007493	rrp12	100	43.083	ENSMEUG00000003185	RRP12	99	42.707	Notamacropus_eugenii
ENSPMAG00000007493	rrp12	80	54.742	ENSOPRG00000005001	RRP12	76	54.742	Ochotona_princeps
ENSPMAG00000007493	rrp12	80	57.228	ENSODEG00000016439	RRP12	99	46.833	Octodon_degus
ENSPMAG00000007493	rrp12	88	52.179	ENSONIG00000009528	rrp12	99	45.889	Oreochromis_niloticus
ENSPMAG00000007493	rrp12	87	50.885	ENSOANG00000006560	RRP12	82	50.885	Ornithorhynchus_anatinus
ENSPMAG00000007493	rrp12	83	56.989	ENSOCUG00000005662	RRP12	99	48.106	Oryctolagus_cuniculus
ENSPMAG00000007493	rrp12	99	46.737	ENSORLG00000008688	rrp12	88	52.397	Oryzias_latipes
ENSPMAG00000007493	rrp12	97	46.564	ENSORLG00020002355	rrp12	87	52.397	Oryzias_latipes_hni
ENSPMAG00000007493	rrp12	99	46.965	ENSORLG00015006709	rrp12	88	52.614	Oryzias_latipes_hsok
ENSPMAG00000007493	rrp12	97	46.846	ENSOMEG00000002609	rrp12	86	52.614	Oryzias_melastigma
ENSPMAG00000007493	rrp12	99	47.558	ENSOGAG00000001626	RRP12	99	47.708	Otolemur_garnettii
ENSPMAG00000007493	rrp12	80	55.463	ENSOARG00000009681	RRP12	82	55.463	Ovis_aries
ENSPMAG00000007493	rrp12	97	55.682	ENSPPAG00000043885	RRP12	99	55.682	Pan_paniscus
ENSPMAG00000007493	rrp12	80	56.429	ENSPPRG00000002029	RRP12	99	55.866	Panthera_pardus
ENSPMAG00000007493	rrp12	73	61.290	ENSPTIG00000004428	RRP12	99	55.866	Panthera_tigris_altaica
ENSPMAG00000007493	rrp12	97	55.682	ENSPTRG00000002806	RRP12	99	55.682	Pan_troglodytes
ENSPMAG00000007493	rrp12	86	55.581	ENSPANG00000021360	RRP12	99	55.682	Papio_anubis
ENSPMAG00000007493	rrp12	99	46.274	ENSPKIG00000016516	rrp12	99	45.861	Paramormyrops_kingsleyae
ENSPMAG00000007493	rrp12	79	52.625	ENSPMGG00000020217	rrp12	82	52.732	Periophthalmus_magnuspinnatus
ENSPMAG00000007493	rrp12	87	57.143	ENSPEMG00000008437	Rrp12	87	57.143	Peromyscus_maniculatus_bairdii
ENSPMAG00000007493	rrp12	99	47.258	ENSPCIG00000002157	RRP12	84	55.900	Phascolarctos_cinereus
ENSPMAG00000007493	rrp12	82	56.033	ENSPFOG00000014975	rrp12	83	56.138	Poecilia_formosa
ENSPMAG00000007493	rrp12	99	47.273	ENSPLAG00000009840	rrp12	99	46.637	Poecilia_latipinna
ENSPMAG00000007493	rrp12	82	56.033	ENSPMEG00000021871	rrp12	83	56.138	Poecilia_mexicana
ENSPMAG00000007493	rrp12	99	46.541	ENSPREG00000020950	rrp12	99	46.062	Poecilia_reticulata
ENSPMAG00000007493	rrp12	99	47.269	ENSPPYG00000002528	RRP12	99	46.929	Pongo_abelii
ENSPMAG00000007493	rrp12	94	63.277	ENSPCAG00000008967	RRP12	94	63.277	Procavia_capensis
ENSPMAG00000007493	rrp12	80	57.041	ENSPCOG00000014009	RRP12	83	57.041	Propithecus_coquereli
ENSPMAG00000007493	rrp12	80	54.241	ENSPVAG00000003370	RRP12	83	54.241	Pteropus_vampyrus
ENSPMAG00000007493	rrp12	88	52.179	ENSPNYG00000009451	rrp12	89	52.443	Pundamilia_nyererei
ENSPMAG00000007493	rrp12	92	62.500	ENSPNAG00000007658	rrp12	99	45.749	Pygocentrus_nattereri
ENSPMAG00000007493	rrp12	82	56.905	ENSRNOG00000048495	Rrp12	82	56.905	Rattus_norvegicus
ENSPMAG00000007493	rrp12	92	61.842	ENSRBIG00000021296	RRP12	99	56.250	Rhinopithecus_bieti
ENSPMAG00000007493	rrp12	92	61.842	ENSRROG00000032482	RRP12	99	56.250	Rhinopithecus_roxellana
ENSPMAG00000007493	rrp12	92	60.526	ENSSBOG00000030992	RRP12	100	55.114	Saimiri_boliviensis_boliviensis
ENSPMAG00000007493	rrp12	87	56.429	ENSSHAG00000018275	RRP12	87	56.429	Sarcophilus_harrisii
ENSPMAG00000007493	rrp12	99	47.360	ENSSFOG00015016400	rrp12	99	47.134	Scleropages_formosus
ENSPMAG00000007493	rrp12	99	45.779	ENSSMAG00000004047	rrp12	99	45.557	Scophthalmus_maximus
ENSPMAG00000007493	rrp12	99	47.001	ENSSDUG00000022871	rrp12	89	52.013	Seriola_dumerili
ENSPMAG00000007493	rrp12	99	46.728	ENSSLDG00000003038	rrp12	89	52.122	Seriola_lalandi_dorsalis
ENSPMAG00000007493	rrp12	86	54.875	ENSSPUG00000012221	RRP12	82	56.651	Sphenodon_punctatus
ENSPMAG00000007493	rrp12	88	51.852	ENSSPAG00000002261	rrp12	89	51.852	Stegastes_partitus
ENSPMAG00000007493	rrp12	82	56.190	ENSSSCG00000010514	RRP12	83	56.190	Sus_scrofa
ENSPMAG00000007493	rrp12	74	53.899	ENSTGUG00000009711	RRP12	84	52.996	Taeniopygia_guttata
ENSPMAG00000007493	rrp12	99	44.629	ENSTRUG00000012017	rrp12	88	49.457	Takifugu_rubripes
ENSPMAG00000007493	rrp12	88	53.587	ENSTNIG00000016522	rrp12	88	53.587	Tetraodon_nigroviridis
ENSPMAG00000007493	rrp12	66	59.542	ENSTBEG00000004907	RRP12	68	59.542	Tupaia_belangeri
ENSPMAG00000007493	rrp12	80	55.054	ENSTTRG00000009878	RRP12	82	55.054	Tursiops_truncatus
ENSPMAG00000007493	rrp12	82	57.262	ENSUAMG00000009092	RRP12	82	57.262	Ursus_americanus
ENSPMAG00000007493	rrp12	82	54.881	ENSUMAG00000021621	RRP12	83	54.083	Ursus_maritimus
ENSPMAG00000007493	rrp12	82	56.272	ENSVVUG00000023168	RRP12	99	47.348	Vulpes_vulpes
ENSPMAG00000007493	rrp12	80	55.542	ENSXETG00000003430	rrp12	83	55.529	Xenopus_tropicalis
ENSPMAG00000007493	rrp12	71	56.033	ENSXCOG00000012082	rrp12	81	64.516	Xiphophorus_couchianus
ENSPMAG00000007493	rrp12	87	52.832	ENSXMAG00000013498	rrp12	99	46.746	Xiphophorus_maculatus