EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000007617 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 2596 bases
Position: chrGL478562:177533-180128
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000008375	RRM_5	PF13893.6	8.8e-11	1	2
ENSPMAP00000008375	RRM_5	PF13893.6	8.8e-11	2	2
ENSPMAP00000008375	RRM_1	PF00076.22	8.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000008413	-	483	-	ENSPMAP00000008375	160 (aa)	-	S4RT35

Gene Model

Click here to download ENSPMAG00000007617's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000007617's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000007617	-	88	62.937	ENSG00000011304	PTBP1	90	60.274	Homo_sapiens
ENSPMAG00000007617	-	88	60.140	ENSACLG00000001885	ptbp2b	78	60.140	Astatotilapia_calliptera
ENSPMAG00000007617	-	88	62.238	ENSCJAG00000020162	-	69	62.238	Callithrix_jacchus
ENSPMAG00000007617	-	88	62.238	ENSCCAG00000025811	-	73	62.238	Cebus_capucinus
ENSPMAG00000007617	-	88	62.937	ENSCATG00000033337	-	73	62.937	Cercocebus_atys
ENSPMAG00000007617	-	88	50.704	ENSCING00000002002	-	71	50.704	Ciona_intestinalis
ENSPMAG00000007617	-	88	60.839	ENSCANG00000005173	-	73	60.839	Colobus_angolensis_palliatus
ENSPMAG00000007617	-	88	62.937	ENSCANG00000038259	PTBP1	74	62.937	Colobus_angolensis_palliatus
ENSPMAG00000007617	-	88	52.448	ENSCANG00000040666	-	70	52.448	Colobus_angolensis_palliatus
ENSPMAG00000007617	-	88	61.972	ENSCGRG00000006229	-	72	61.972	Cricetulus_griseus_crigri
ENSPMAG00000007617	-	88	52.778	ENSCVAG00000021593	-	77	52.778	Cyprinodon_variegatus
ENSPMAG00000007617	-	88	61.268	ENSDARG00000031907	ptbp1b	64	61.268	Danio_rerio
ENSPMAG00000007617	-	88	62.238	ENSDARG00000101947	ptbp2a	78	62.238	Danio_rerio
ENSPMAG00000007617	-	88	62.238	ENSEASG00005021535	-	95	62.238	Equus_asinus_asinus
ENSPMAG00000007617	-	88	62.937	ENSFCAG00000001219	PTBP1	73	62.937	Felis_catus
ENSPMAG00000007617	-	79	55.469	ENSGGOG00000026783	-	65	54.867	Gorilla_gorilla
ENSPMAG00000007617	-	89	63.194	ENSGGOG00000005090	-	77	63.194	Gorilla_gorilla
ENSPMAG00000007617	-	88	63.636	ENSHBUG00000000040	-	95	63.636	Haplochromis_burtoni
ENSPMAG00000007617	-	87	63.830	ENSHGLG00100004890	-	100	63.830	Heterocephalus_glaber_male
ENSPMAG00000007617	-	88	60.839	ENSHCOG00000015622	-	66	60.839	Hippocampus_comes
ENSPMAG00000007617	-	88	60.839	ENSHCOG00000013349	ptbp2a	60	60.839	Hippocampus_comes
ENSPMAG00000007617	-	88	62.937	ENSMFAG00000038325	-	73	62.937	Macaca_fascicularis
ENSPMAG00000007617	-	88	62.937	ENSMMUG00000016450	-	73	62.937	Macaca_mulatta
ENSPMAG00000007617	-	88	62.937	ENSMNEG00000028851	PTBP1	73	62.937	Macaca_nemestrina
ENSPMAG00000007617	-	88	62.937	ENSMLEG00000013865	PTBP1	74	62.937	Mandrillus_leucophaeus
ENSPMAG00000007617	-	88	62.238	ENSMICG00000007131	PTBP1	73	62.238	Microcebus_murinus
ENSPMAG00000007617	-	88	60.690	ENSMALG00000013144	ptbp3	76	60.690	Monopterus_albus
ENSPMAG00000007617	-	88	60.140	ENSNBRG00000001492	-	64	60.140	Neolamprologus_brichardi
ENSPMAG00000007617	-	88	62.937	ENSNLEG00000000864	PTBP1	74	62.937	Nomascus_leucogenys
ENSPMAG00000007617	-	88	65.035	ENSOANG00000008979	-	76	65.035	Ornithorhynchus_anatinus
ENSPMAG00000007617	-	88	60.839	ENSOMEG00000009759	ptbp2a	86	60.839	Oryzias_melastigma
ENSPMAG00000007617	-	88	62.937	ENSPPAG00000032109	-	76	62.937	Pan_paniscus
ENSPMAG00000007617	-	74	60.331	ENSPPAG00000011962	-	68	60.331	Pan_paniscus
ENSPMAG00000007617	-	88	62.937	ENSPPRG00000006787	PTBP1	73	62.937	Panthera_pardus
ENSPMAG00000007617	-	88	62.937	ENSPTRG00000010165	PTBP1	76	62.937	Pan_troglodytes
ENSPMAG00000007617	-	88	62.937	ENSPANG00000007281	PTBP1	73	62.937	Papio_anubis
ENSPMAG00000007617	-	91	62.838	ENSPMGG00000020540	-	80	60.135	Periophthalmus_magnuspinnatus
ENSPMAG00000007617	-	87	62.411	ENSPREG00000000963	-	100	62.411	Poecilia_reticulata
ENSPMAG00000007617	-	88	62.238	ENSPCOG00000015093	PTBP1	73	62.238	Propithecus_coquereli
ENSPMAG00000007617	-	88	54.167	ENSPNYG00000005126	-	77	54.167	Pundamilia_nyererei
ENSPMAG00000007617	-	88	48.571	ENSRBIG00000026293	-	72	47.857	Rhinopithecus_bieti
ENSPMAG00000007617	-	88	62.937	ENSRBIG00000044228	PTBP1	73	62.937	Rhinopithecus_bieti
ENSPMAG00000007617	-	88	54.545	ENSRBIG00000007193	-	71	54.545	Rhinopithecus_bieti
ENSPMAG00000007617	-	88	51.408	ENSRROG00000044920	-	72	51.408	Rhinopithecus_roxellana
ENSPMAG00000007617	-	88	44.755	ENSRROG00000021572	-	67	44.755	Rhinopithecus_roxellana
ENSPMAG00000007617	-	88	62.937	ENSRROG00000016534	PTBP1	73	62.937	Rhinopithecus_roxellana
ENSPMAG00000007617	-	88	62.238	ENSSBOG00000034376	-	74	62.238	Saimiri_boliviensis_boliviensis
ENSPMAG00000007617	-	63	60.784	ENSSLDG00000009104	-	79	60.784	Seriola_lalandi_dorsalis
ENSPMAG00000007617	-	89	53.061	ENSSPAG00000008968	-	86	53.061	Stegastes_partitus
ENSPMAG00000007617	-	88	62.238	ENSTRUG00000000761	ptbp2a	95	62.238	Takifugu_rubripes
ENSPMAG00000007617	-	87	67.376	ENSUAMG00000011687	-	100	67.376	Ursus_americanus
ENSPMAG00000007617	-	88	63.380	ENSUMAG00000005396	-	97	63.380	Ursus_maritimus
ENSPMAG00000007617	-	78	31.618	ENSXETG00000033350	HNRNPLL	53	31.618	Xenopus_tropicalis
ENSPMAG00000007617	-	88	60.839	ENSXCOG00000007998	ptbp2b	72	55.944	Xiphophorus_couchianus