EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMAG00000007719 (Gene tree)
Gene ID: -
Gene Symbol: rad54l
Alias: -
Full Name: RAD54 like
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Plus strand
Length: 8461 bases
Position: chrGL478142:26283-34743
Accession: ZDB-GENE-040426-968
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000008508	ResIII	PF04851.15	6.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000008546	-	2235	-	ENSPMAP00000008508	744 (aa)	-	S4RTG8

Gene Model

Click here to download ENSPMAG00000007719's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000007719's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMAG00000007719	rad54l	74	44.186	ENSPMAG00000002916	rad54b	69	44.444
ENSPMAG00000007719	rad54l	64	30.675	ENSPMAG00000008026	SMARCA5	68	30.675
ENSPMAG00000007719	rad54l	64	30.377	ENSPMAG00000005064	ercc6l	70	30.263
ENSPMAG00000007719	rad54l	60	31.169	ENSPMAG00000001030	-	60	31.681
ENSPMAG00000007719	rad54l	60	31.347	ENSPMAG00000003871	-	78	31.416

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000007719	rad54l	99	70.470	ENSG00000085999	RAD54L	100	84.000	Homo_sapiens
ENSPMAG00000007719	rad54l	99	68.371	ENSAPOG00000011643	rad54l	99	68.371	Acanthochromis_polyacanthus
ENSPMAG00000007719	rad54l	99	70.839	ENSAMEG00000013902	RAD54L	99	70.839	Ailuropoda_melanoleuca
ENSPMAG00000007719	rad54l	99	69.946	ENSACIG00000001939	rad54l	99	69.946	Amphilophus_citrinellus
ENSPMAG00000007719	rad54l	99	70.889	ENSAOCG00000017576	rad54l	99	70.889	Amphiprion_ocellaris
ENSPMAG00000007719	rad54l	97	71.567	ENSAPEG00000020658	rad54l	99	71.567	Amphiprion_percula
ENSPMAG00000007719	rad54l	94	72.493	ENSATEG00000006767	rad54l	99	72.493	Anabas_testudineus
ENSPMAG00000007719	rad54l	94	73.894	ENSAPLG00000006389	RAD54L	99	73.894	Anas_platyrhynchos
ENSPMAG00000007719	rad54l	99	71.736	ENSACAG00000002312	RAD54L	99	71.736	Anolis_carolinensis
ENSPMAG00000007719	rad54l	99	71.180	ENSANAG00000035439	RAD54L	99	71.141	Aotus_nancymaae
ENSPMAG00000007719	rad54l	99	68.514	ENSACLG00000018711	rad54l	99	68.514	Astatotilapia_calliptera
ENSPMAG00000007719	rad54l	99	71.123	ENSAMXG00000012777	rad54l	99	71.123	Astyanax_mexicanus
ENSPMAG00000007719	rad54l	99	71.429	ENSBTAG00000019901	RAD54L	99	71.429	Bos_taurus
ENSPMAG00000007719	rad54l	91	54.307	WBGene00004298	rad-54	83	54.307	Caenorhabditis_elegans
ENSPMAG00000007719	rad54l	97	70.994	ENSCJAG00000021080	RAD54L	91	70.994	Callithrix_jacchus
ENSPMAG00000007719	rad54l	99	70.628	ENSCAFG00000004272	RAD54L	99	70.628	Canis_familiaris
ENSPMAG00000007719	rad54l	99	70.667	ENSCAFG00020015066	RAD54L	99	70.667	Canis_lupus_dingo
ENSPMAG00000007719	rad54l	99	71.333	ENSCHIG00000020118	RAD54L	99	71.333	Capra_hircus
ENSPMAG00000007719	rad54l	99	70.241	ENSTSYG00000002032	RAD54L	99	70.241	Carlito_syrichta
ENSPMAG00000007719	rad54l	99	71.162	ENSCPOG00000006768	RAD54L	99	71.162	Cavia_porcellus
ENSPMAG00000007719	rad54l	99	71.275	ENSCCAG00000025783	RAD54L	99	71.275	Cebus_capucinus
ENSPMAG00000007719	rad54l	99	70.872	ENSCATG00000030589	RAD54L	99	70.872	Cercocebus_atys
ENSPMAG00000007719	rad54l	99	71.696	ENSCLAG00000004645	RAD54L	99	71.696	Chinchilla_lanigera
ENSPMAG00000007719	rad54l	99	70.872	ENSCSAG00000001229	RAD54L	99	70.872	Chlorocebus_sabaeus
ENSPMAG00000007719	rad54l	99	71.754	ENSCPBG00000005675	RAD54L	99	71.754	Chrysemys_picta_bellii
ENSPMAG00000007719	rad54l	99	57.328	ENSCING00000024456	-	99	57.328	Ciona_intestinalis
ENSPMAG00000007719	rad54l	99	58.215	ENSCSAVG00000010859	-	99	58.215	Ciona_savignyi
ENSPMAG00000007719	rad54l	99	70.738	ENSCANG00000034891	RAD54L	99	70.738	Colobus_angolensis_palliatus
ENSPMAG00000007719	rad54l	99	69.960	ENSCGRG00001014807	Rad54l	99	69.960	Cricetulus_griseus_chok1gshd
ENSPMAG00000007719	rad54l	99	69.960	ENSCGRG00000016038	Rad54l	99	69.960	Cricetulus_griseus_crigri
ENSPMAG00000007719	rad54l	99	68.817	ENSCSEG00000001983	rad54l	99	68.817	Cynoglossus_semilaevis
ENSPMAG00000007719	rad54l	86	66.751	ENSCVAG00000019561	rad54l	99	66.751	Cyprinodon_variegatus
ENSPMAG00000007719	rad54l	99	71.198	ENSDARG00000018623	rad54l	99	71.198	Danio_rerio
ENSPMAG00000007719	rad54l	99	71.028	ENSDNOG00000003395	RAD54L	99	71.028	Dasypus_novemcinctus
ENSPMAG00000007719	rad54l	99	64.954	ENSDORG00000002632	Rad54l	99	64.690	Dipodomys_ordii
ENSPMAG00000007719	rad54l	99	52.255	FBgn0002989	okr	95	52.255	Drosophila_melanogaster
ENSPMAG00000007719	rad54l	71	72.511	ENSETEG00000000550	RAD54L	71	72.511	Echinops_telfairi
ENSPMAG00000007719	rad54l	99	70.800	ENSEASG00005004511	RAD54L	99	70.800	Equus_asinus_asinus
ENSPMAG00000007719	rad54l	99	71.162	ENSECAG00000008760	RAD54L	99	71.162	Equus_caballus
ENSPMAG00000007719	rad54l	90	73.894	ENSEEUG00000008113	RAD54L	90	73.894	Erinaceus_europaeus
ENSPMAG00000007719	rad54l	99	71.409	ENSELUG00000002295	rad54l	99	71.409	Esox_lucius
ENSPMAG00000007719	rad54l	99	70.360	ENSFCAG00000003444	RAD54L	99	70.360	Felis_catus
ENSPMAG00000007719	rad54l	99	71.505	ENSFALG00000009480	RAD54L	99	71.658	Ficedula_albicollis
ENSPMAG00000007719	rad54l	99	70.761	ENSFDAG00000007806	RAD54L	99	70.761	Fukomys_damarensis
ENSPMAG00000007719	rad54l	61	73.846	ENSFHEG00000009824	rad54l	78	73.742	Fundulus_heteroclitus
ENSPMAG00000007719	rad54l	99	69.811	ENSGMOG00000014568	rad54l	99	69.811	Gadus_morhua
ENSPMAG00000007719	rad54l	99	71.850	ENSGALG00000010356	RAD54L	91	71.850	Gallus_gallus
ENSPMAG00000007719	rad54l	84	73.892	ENSGAFG00000011110	rad54l	92	73.892	Gambusia_affinis
ENSPMAG00000007719	rad54l	99	69.664	ENSGACG00000003111	rad54l	97	69.664	Gasterosteus_aculeatus
ENSPMAG00000007719	rad54l	99	72.043	ENSGAGG00000014089	RAD54L	95	72.043	Gopherus_agassizii
ENSPMAG00000007719	rad54l	99	70.470	ENSGGOG00000010602	RAD54L	99	70.470	Gorilla_gorilla
ENSPMAG00000007719	rad54l	99	68.826	ENSHBUG00000007793	rad54l	99	68.826	Haplochromis_burtoni
ENSPMAG00000007719	rad54l	99	71.007	ENSHGLG00000000753	RAD54L	99	71.007	Heterocephalus_glaber_female
ENSPMAG00000007719	rad54l	99	70.872	ENSHGLG00100016987	RAD54L	99	70.872	Heterocephalus_glaber_male
ENSPMAG00000007719	rad54l	99	70.596	ENSIPUG00000015999	rad54l	99	72.872	Ictalurus_punctatus
ENSPMAG00000007719	rad54l	99	71.162	ENSSTOG00000029125	RAD54L	99	71.162	Ictidomys_tridecemlineatus
ENSPMAG00000007719	rad54l	99	59.304	ENSJJAG00000000235	-	99	59.304	Jaculus_jaculus
ENSPMAG00000007719	rad54l	99	69.137	ENSKMAG00000009944	rad54l	99	69.137	Kryptolebias_marmoratus
ENSPMAG00000007719	rad54l	99	71.294	ENSLBEG00000014617	rad54l	97	73.412	Labrus_bergylta
ENSPMAG00000007719	rad54l	99	70.580	ENSLOCG00000004144	rad54l	92	76.396	Lepisosteus_oculatus
ENSPMAG00000007719	rad54l	99	71.200	ENSLAFG00000007583	RAD54L	99	71.600	Loxodonta_africana
ENSPMAG00000007719	rad54l	99	71.141	ENSMFAG00000031241	RAD54L	99	71.141	Macaca_fascicularis
ENSPMAG00000007719	rad54l	99	71.141	ENSMMUG00000011568	RAD54L	99	71.141	Macaca_mulatta
ENSPMAG00000007719	rad54l	99	71.007	ENSMNEG00000038562	RAD54L	99	71.007	Macaca_nemestrina
ENSPMAG00000007719	rad54l	99	71.007	ENSMLEG00000038145	RAD54L	99	71.007	Mandrillus_leucophaeus
ENSPMAG00000007719	rad54l	99	68.108	ENSMAMG00000022180	rad54l	99	71.450	Mastacembelus_armatus
ENSPMAG00000007719	rad54l	99	68.378	ENSMZEG00005018081	rad54l	99	68.378	Maylandia_zebra
ENSPMAG00000007719	rad54l	99	71.850	ENSMGAG00000010634	RAD54L	99	71.850	Meleagris_gallopavo
ENSPMAG00000007719	rad54l	99	70.494	ENSMAUG00000020076	Rad54l	99	70.494	Mesocricetus_auratus
ENSPMAG00000007719	rad54l	99	71.141	ENSMICG00000003266	RAD54L	99	71.141	Microcebus_murinus
ENSPMAG00000007719	rad54l	99	70.761	ENSMOCG00000001778	Rad54l	99	70.761	Microtus_ochrogaster
ENSPMAG00000007719	rad54l	99	68.054	ENSMALG00000021148	rad54l	99	68.188	Monopterus_albus
ENSPMAG00000007719	rad54l	99	67.013	MGP_CAROLIEiJ_G0026325	Rad54l	99	67.013	Mus_caroli
ENSPMAG00000007719	rad54l	99	70.761	ENSMUSG00000028702	Rad54l	99	70.761	Mus_musculus
ENSPMAG00000007719	rad54l	99	70.360	MGP_PahariEiJ_G0028657	Rad54l	99	70.360	Mus_pahari
ENSPMAG00000007719	rad54l	99	70.628	MGP_SPRETEiJ_G0027297	Rad54l	99	70.628	Mus_spretus
ENSPMAG00000007719	rad54l	99	71.011	ENSMPUG00000012883	RAD54L	99	71.011	Mustela_putorius_furo
ENSPMAG00000007719	rad54l	99	71.067	ENSMLUG00000003763	RAD54L	99	71.067	Myotis_lucifugus
ENSPMAG00000007719	rad54l	99	69.960	ENSNGAG00000024213	Rad54l	99	69.960	Nannospalax_galili
ENSPMAG00000007719	rad54l	99	70.872	ENSNLEG00000016548	RAD54L	99	70.872	Nomascus_leucogenys
ENSPMAG00000007719	rad54l	90	69.300	ENSMEUG00000006793	RAD54L	99	69.300	Notamacropus_eugenii
ENSPMAG00000007719	rad54l	89	71.538	ENSOPRG00000016016	RAD54L	90	71.538	Ochotona_princeps
ENSPMAG00000007719	rad54l	99	71.162	ENSODEG00000008519	RAD54L	99	71.162	Octodon_degus
ENSPMAG00000007719	rad54l	99	68.775	ENSONIG00000007659	rad54l	99	68.775	Oreochromis_niloticus
ENSPMAG00000007719	rad54l	99	70.761	ENSOCUG00000005229	RAD54L	99	70.761	Oryctolagus_cuniculus
ENSPMAG00000007719	rad54l	99	69.478	ENSORLG00000002958	rad54l	99	70.281	Oryzias_latipes
ENSPMAG00000007719	rad54l	99	70.415	ENSORLG00020006554	rad54l	99	73.167	Oryzias_latipes_hni
ENSPMAG00000007719	rad54l	99	70.281	ENSORLG00015002907	rad54l	99	70.415	Oryzias_latipes_hsok
ENSPMAG00000007719	rad54l	99	70.968	ENSOMEG00000007770	rad54l	99	70.968	Oryzias_melastigma
ENSPMAG00000007719	rad54l	99	71.067	ENSOARG00000002264	RAD54L	99	71.067	Ovis_aries
ENSPMAG00000007719	rad54l	99	70.604	ENSPPAG00000031222	RAD54L	99	70.604	Pan_paniscus
ENSPMAG00000007719	rad54l	99	70.494	ENSPPRG00000010317	RAD54L	99	70.494	Panthera_pardus
ENSPMAG00000007719	rad54l	99	70.494	ENSPTIG00000012200	RAD54L	99	70.494	Panthera_tigris_altaica
ENSPMAG00000007719	rad54l	99	70.470	ENSPTRG00000000689	RAD54L	99	70.604	Pan_troglodytes
ENSPMAG00000007719	rad54l	99	71.007	ENSPANG00000016295	RAD54L	99	71.007	Papio_anubis
ENSPMAG00000007719	rad54l	99	67.388	ENSPKIG00000016172	rad54l	99	67.388	Paramormyrops_kingsleyae
ENSPMAG00000007719	rad54l	98	72.260	ENSPSIG00000003258	RAD54L	99	72.260	Pelodiscus_sinensis
ENSPMAG00000007719	rad54l	99	67.513	ENSPMGG00000016335	rad54l	99	67.925	Periophthalmus_magnuspinnatus
ENSPMAG00000007719	rad54l	99	70.013	ENSPEMG00000011422	Rad54l	99	70.013	Peromyscus_maniculatus_bairdii
ENSPMAG00000007719	rad54l	99	71.159	ENSPCIG00000029032	RAD54L	99	71.159	Phascolarctos_cinereus
ENSPMAG00000007719	rad54l	78	77.187	ENSPFOG00000013732	rad54l	91	77.187	Poecilia_formosa
ENSPMAG00000007719	rad54l	75	76.106	ENSPLAG00000023416	rad54l	91	76.106	Poecilia_latipinna
ENSPMAG00000007719	rad54l	84	74.286	ENSPMEG00000008299	rad54l	92	74.127	Poecilia_mexicana
ENSPMAG00000007719	rad54l	99	69.044	ENSPREG00000019955	rad54l	99	69.044	Poecilia_reticulata
ENSPMAG00000007719	rad54l	99	63.490	ENSPPYG00000001398	RAD54L	99	63.490	Pongo_abelii
ENSPMAG00000007719	rad54l	79	68.718	ENSPCAG00000005323	RAD54L	80	68.718	Procavia_capensis
ENSPMAG00000007719	rad54l	99	70.604	ENSPCOG00000015423	RAD54L	99	70.604	Propithecus_coquereli
ENSPMAG00000007719	rad54l	99	65.241	ENSPNYG00000002942	rad54l	98	65.779	Pundamilia_nyererei
ENSPMAG00000007719	rad54l	99	72.118	ENSPNAG00000012483	rad54l	99	72.118	Pygocentrus_nattereri
ENSPMAG00000007719	rad54l	99	70.494	ENSRNOG00000013148	Rad54l	99	70.494	Rattus_norvegicus
ENSPMAG00000007719	rad54l	99	70.872	ENSRBIG00000043495	RAD54L	99	70.872	Rhinopithecus_bieti
ENSPMAG00000007719	rad54l	99	70.872	ENSRROG00000020844	RAD54L	99	70.872	Rhinopithecus_roxellana
ENSPMAG00000007719	rad54l	81	42.702	YGL163C	RAD54	71	43.012	Saccharomyces_cerevisiae
ENSPMAG00000007719	rad54l	99	71.275	ENSSBOG00000024672	RAD54L	99	71.275	Saimiri_boliviensis_boliviensis
ENSPMAG00000007719	rad54l	99	71.237	ENSSHAG00000000110	RAD54L	99	71.237	Sarcophilus_harrisii
ENSPMAG00000007719	rad54l	99	71.294	ENSSDUG00000019147	rad54l	99	71.294	Seriola_dumerili
ENSPMAG00000007719	rad54l	99	70.755	ENSSLDG00000012330	rad54l	99	70.755	Seriola_lalandi_dorsalis
ENSPMAG00000007719	rad54l	84	74.641	ENSSARG00000006689	RAD54L	99	74.641	Sorex_araneus
ENSPMAG00000007719	rad54l	99	70.256	ENSSPAG00000011016	rad54l	99	70.256	Stegastes_partitus
ENSPMAG00000007719	rad54l	99	70.761	ENSSSCG00000003905	RAD54L	99	70.761	Sus_scrofa
ENSPMAG00000007719	rad54l	99	71.123	ENSTGUG00000008233	RAD54L	99	71.524	Taeniopygia_guttata
ENSPMAG00000007719	rad54l	99	67.068	ENSTRUG00000008410	rad54l	99	67.068	Takifugu_rubripes
ENSPMAG00000007719	rad54l	99	68.243	ENSTNIG00000004716	rad54l	99	68.784	Tetraodon_nigroviridis
ENSPMAG00000007719	rad54l	99	66.489	ENSTTRG00000006315	RAD54L	99	66.489	Tursiops_truncatus
ENSPMAG00000007719	rad54l	99	70.889	ENSUAMG00000011824	RAD54L	99	70.889	Ursus_americanus
ENSPMAG00000007719	rad54l	99	71.046	ENSUMAG00000023603	RAD54L	99	71.046	Ursus_maritimus
ENSPMAG00000007719	rad54l	99	70.628	ENSVVUG00000007201	RAD54L	99	70.628	Vulpes_vulpes
ENSPMAG00000007719	rad54l	96	67.364	ENSXETG00000004369	rad54l	99	67.364	Xenopus_tropicalis
ENSPMAG00000007719	rad54l	55	73.544	ENSXCOG00000016028	rad54l	81	77.446	Xiphophorus_couchianus