EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMAG00000007790 (Gene tree)
Gene ID: -
Gene Symbol: srsf5b
Alias: -
Full Name: serine/arginine-rich splicing factor 5b
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Plus strand
Length: 3344 bases
Position: chrGL476329:954662-958005
Accession: ZDB-GENE-040718-354
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000008582	RRM_1	PF00076.22	3.9e-31	1	2
ENSPMAP00000008582	RRM_1	PF00076.22	3.9e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000008620	-	881	-	ENSPMAP00000008582	290 (aa)	-	S4RTP2

Gene Model

Click here to download ENSPMAG00000007790's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000007790's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMAG00000007790	srsf5b	90	47.955	ENSPMAG00000009397	srsf4	67	55.789

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000007790	srsf5b	67	62.694	ENSG00000100650	SRSF5	98	55.634	Homo_sapiens
ENSPMAG00000007790	srsf5b	68	61.421	ENSAPOG00000008642	srsf5b	65	61.111	Acanthochromis_polyacanthus
ENSPMAG00000007790	srsf5b	67	62.694	ENSAMEG00000014574	SRSF5	99	51.667	Ailuropoda_melanoleuca
ENSPMAG00000007790	srsf5b	86	52.830	ENSACIG00000010742	srsf5b	81	56.204	Amphilophus_citrinellus
ENSPMAG00000007790	srsf5b	68	61.421	ENSAOCG00000005719	srsf5b	65	61.111	Amphiprion_ocellaris
ENSPMAG00000007790	srsf5b	68	61.421	ENSAPEG00000007830	srsf5b	65	61.111	Amphiprion_percula
ENSPMAG00000007790	srsf5b	86	55.513	ENSATEG00000019112	srsf5b	65	61.111	Anabas_testudineus
ENSPMAG00000007790	srsf5b	64	61.290	ENSAPLG00000014681	SRSF5	66	61.538	Anas_platyrhynchos
ENSPMAG00000007790	srsf5b	67	61.616	ENSACAG00000005143	SRSF5	69	62.069	Anolis_carolinensis
ENSPMAG00000007790	srsf5b	67	62.694	ENSANAG00000027977	-	81	70.732	Aotus_nancymaae
ENSPMAG00000007790	srsf5b	86	53.208	ENSACLG00000026424	srsf5b	65	61.616	Astatotilapia_calliptera
ENSPMAG00000007790	srsf5b	91	54.412	ENSAMXG00000011932	srsf5b	98	52.045	Astyanax_mexicanus
ENSPMAG00000007790	srsf5b	67	62.694	ENSBTAG00000011596	SRSF5	99	51.667	Bos_taurus
ENSPMAG00000007790	srsf5b	67	62.694	ENSCJAG00000014884	SRSF5	81	70.732	Callithrix_jacchus
ENSPMAG00000007790	srsf5b	67	62.694	ENSCAFG00000016589	SRSF5	99	51.667	Canis_familiaris
ENSPMAG00000007790	srsf5b	67	62.694	ENSCAFG00020005661	SRSF5	99	51.667	Canis_lupus_dingo
ENSPMAG00000007790	srsf5b	67	62.694	ENSCHIG00000016794	SRSF5	99	51.667	Capra_hircus
ENSPMAG00000007790	srsf5b	67	62.694	ENSTSYG00000007786	SRSF5	81	70.732	Carlito_syrichta
ENSPMAG00000007790	srsf5b	67	62.694	ENSCAPG00000008801	SRSF5	99	52.000	Cavia_aperea
ENSPMAG00000007790	srsf5b	67	62.694	ENSCPOG00000039926	SRSF5	99	56.436	Cavia_porcellus
ENSPMAG00000007790	srsf5b	67	62.694	ENSCCAG00000029002	SRSF5	81	70.732	Cebus_capucinus
ENSPMAG00000007790	srsf5b	67	62.694	ENSCATG00000045051	SRSF5	81	70.732	Cercocebus_atys
ENSPMAG00000007790	srsf5b	67	62.694	ENSCLAG00000004755	SRSF5	99	52.000	Chinchilla_lanigera
ENSPMAG00000007790	srsf5b	67	62.694	ENSCSAG00000013041	SRSF5	67	61.881	Chlorocebus_sabaeus
ENSPMAG00000007790	srsf5b	67	62.694	ENSCPBG00000021653	SRSF5	99	52.055	Chrysemys_picta_bellii
ENSPMAG00000007790	srsf5b	67	62.694	ENSCANG00000030560	SRSF5	81	70.732	Colobus_angolensis_palliatus
ENSPMAG00000007790	srsf5b	67	62.694	ENSCGRG00001015339	Srsf5	68	61.881	Cricetulus_griseus_chok1gshd
ENSPMAG00000007790	srsf5b	67	62.694	ENSCGRG00000009833	Srsf5	68	61.881	Cricetulus_griseus_crigri
ENSPMAG00000007790	srsf5b	79	53.600	ENSCSEG00000003801	srsf5b	66	60.606	Cynoglossus_semilaevis
ENSPMAG00000007790	srsf5b	68	60.914	ENSCVAG00000017240	srsf5b	58	61.111	Cyprinodon_variegatus
ENSPMAG00000007790	srsf5b	67	62.694	ENSDARG00000027734	srsf5b	90	56.204	Danio_rerio
ENSPMAG00000007790	srsf5b	67	62.694	ENSDNOG00000006160	SRSF5	99	51.839	Dasypus_novemcinctus
ENSPMAG00000007790	srsf5b	67	62.694	ENSDORG00000003989	Srsf5	68	61.881	Dipodomys_ordii
ENSPMAG00000007790	srsf5b	67	58.549	ENSETEG00000020396	SRSF5	68	60.406	Echinops_telfairi
ENSPMAG00000007790	srsf5b	68	70.051	ENSEBUG00000006229	srsf5b	69	68.182	Eptatretus_burgeri
ENSPMAG00000007790	srsf5b	67	62.694	ENSEASG00005016615	SRSF5	99	51.667	Equus_asinus_asinus
ENSPMAG00000007790	srsf5b	67	62.694	ENSECAG00000026873	SRSF5	88	55.634	Equus_caballus
ENSPMAG00000007790	srsf5b	68	60.914	ENSELUG00000019852	srsf5b	85	53.425	Esox_lucius
ENSPMAG00000007790	srsf5b	67	62.694	ENSFCAG00000008848	SRSF5	80	70.732	Felis_catus
ENSPMAG00000007790	srsf5b	67	60.622	ENSFALG00000004979	SRSF5	68	62.687	Ficedula_albicollis
ENSPMAG00000007790	srsf5b	67	62.694	ENSFDAG00000011562	SRSF5	68	61.881	Fukomys_damarensis
ENSPMAG00000007790	srsf5b	68	61.421	ENSFHEG00000009476	srsf5b	62	61.111	Fundulus_heteroclitus
ENSPMAG00000007790	srsf5b	68	52.174	ENSGMOG00000000595	srsf5b	99	52.564	Gadus_morhua
ENSPMAG00000007790	srsf5b	67	62.176	ENSGALG00000009421	SRSF5	99	57.491	Gallus_gallus
ENSPMAG00000007790	srsf5b	68	60.914	ENSGAFG00000002865	srsf5b	63	61.111	Gambusia_affinis
ENSPMAG00000007790	srsf5b	67	48.387	ENSGACG00000007834	srsf5b	86	55.072	Gasterosteus_aculeatus
ENSPMAG00000007790	srsf5b	67	62.694	ENSGAGG00000004447	SRSF5	99	52.055	Gopherus_agassizii
ENSPMAG00000007790	srsf5b	67	62.694	ENSGGOG00000016462	SRSF5	81	70.732	Gorilla_gorilla
ENSPMAG00000007790	srsf5b	68	61.929	ENSHBUG00000012462	srsf5b	93	56.204	Haplochromis_burtoni
ENSPMAG00000007790	srsf5b	67	62.694	ENSHGLG00000010147	SRSF5	67	61.881	Heterocephalus_glaber_female
ENSPMAG00000007790	srsf5b	64	44.385	ENSHGLG00100000095	-	62	44.149	Heterocephalus_glaber_male
ENSPMAG00000007790	srsf5b	67	62.694	ENSHGLG00100015328	SRSF5	67	61.881	Heterocephalus_glaber_male
ENSPMAG00000007790	srsf5b	66	60.938	ENSHCOG00000005592	srsf5b	66	58.291	Hippocampus_comes
ENSPMAG00000007790	srsf5b	67	62.694	ENSSTOG00000020672	SRSF5	67	61.881	Ictidomys_tridecemlineatus
ENSPMAG00000007790	srsf5b	67	62.694	ENSJJAG00000001688	Srsf5	99	52.000	Jaculus_jaculus
ENSPMAG00000007790	srsf5b	68	61.929	ENSKMAG00000020486	srsf5b	84	56.204	Kryptolebias_marmoratus
ENSPMAG00000007790	srsf5b	68	61.421	ENSLBEG00000013647	srsf5b	65	61.111	Labrus_bergylta
ENSPMAG00000007790	srsf5b	67	61.658	ENSLACG00000005874	SRSF5	99	50.662	Latimeria_chalumnae
ENSPMAG00000007790	srsf5b	67	63.077	ENSLOCG00000012438	srsf5b	70	61.881	Lepisosteus_oculatus
ENSPMAG00000007790	srsf5b	67	62.176	ENSLAFG00000005260	SRSF5	99	51.505	Loxodonta_africana
ENSPMAG00000007790	srsf5b	67	62.694	ENSMFAG00000002393	SRSF5	81	70.732	Macaca_fascicularis
ENSPMAG00000007790	srsf5b	67	62.694	ENSMNEG00000030872	SRSF5	81	70.732	Macaca_nemestrina
ENSPMAG00000007790	srsf5b	67	62.694	ENSMLEG00000030017	SRSF5	81	70.732	Mandrillus_leucophaeus
ENSPMAG00000007790	srsf5b	68	62.437	ENSMAMG00000002673	srsf5b	65	63.636	Mastacembelus_armatus
ENSPMAG00000007790	srsf5b	86	53.208	ENSMZEG00005003550	srsf5b	65	61.616	Maylandia_zebra
ENSPMAG00000007790	srsf5b	53	56.863	ENSMGAG00000011835	SRSF5	99	52.988	Meleagris_gallopavo
ENSPMAG00000007790	srsf5b	67	62.694	ENSMAUG00000009544	Srsf5	67	61.881	Mesocricetus_auratus
ENSPMAG00000007790	srsf5b	67	62.694	ENSMICG00000037432	-	81	70.732	Microcebus_murinus
ENSPMAG00000007790	srsf5b	67	62.694	ENSMOCG00000013134	Srsf5	67	61.881	Microtus_ochrogaster
ENSPMAG00000007790	srsf5b	67	62.176	ENSMMOG00000000137	srsf5b	91	50.000	Mola_mola
ENSPMAG00000007790	srsf5b	67	62.694	ENSMODG00000011362	SRSF5	99	52.055	Monodelphis_domestica
ENSPMAG00000007790	srsf5b	68	61.421	ENSMALG00000021875	srsf5b	84	56.204	Monopterus_albus
ENSPMAG00000007790	srsf5b	67	62.694	ENSMUSG00000021134	Srsf5	96	73.333	Mus_musculus
ENSPMAG00000007790	srsf5b	67	62.694	MGP_PahariEiJ_G0029659	Srsf5	68	61.881	Mus_pahari
ENSPMAG00000007790	srsf5b	67	62.694	ENSMPUG00000007458	SRSF5	99	51.667	Mustela_putorius_furo
ENSPMAG00000007790	srsf5b	67	62.694	ENSMLUG00000011939	SRSF5	99	58.000	Myotis_lucifugus
ENSPMAG00000007790	srsf5b	67	62.694	ENSNGAG00000010073	-	67	61.881	Nannospalax_galili
ENSPMAG00000007790	srsf5b	68	61.929	ENSNBRG00000001285	srsf5b	65	62.121	Neolamprologus_brichardi
ENSPMAG00000007790	srsf5b	67	62.694	ENSNLEG00000001615	SRSF5	81	70.732	Nomascus_leucogenys
ENSPMAG00000007790	srsf5b	67	62.694	ENSOPRG00000008286	SRSF5	99	51.667	Ochotona_princeps
ENSPMAG00000007790	srsf5b	67	62.176	ENSODEG00000000700	-	97	51.579	Octodon_degus
ENSPMAG00000007790	srsf5b	67	62.694	ENSODEG00000013469	-	99	52.000	Octodon_degus
ENSPMAG00000007790	srsf5b	86	53.208	ENSONIG00000005759	srsf5b	65	61.616	Oreochromis_niloticus
ENSPMAG00000007790	srsf5b	64	60.963	ENSOANG00000013336	SRSF5	66	60.204	Ornithorhynchus_anatinus
ENSPMAG00000007790	srsf5b	67	62.694	ENSOCUG00000009274	SRSF5	99	51.495	Oryctolagus_cuniculus
ENSPMAG00000007790	srsf5b	68	61.616	ENSORLG00000029854	srsf5b	59	57.009	Oryzias_latipes
ENSPMAG00000007790	srsf5b	68	62.437	ENSORLG00015001720	srsf5b	65	61.111	Oryzias_latipes_hsok
ENSPMAG00000007790	srsf5b	67	62.694	ENSOGAG00000015122	SRSF5	67	61.881	Otolemur_garnettii
ENSPMAG00000007790	srsf5b	67	62.694	ENSPPAG00000029921	SRSF5	81	70.732	Pan_paniscus
ENSPMAG00000007790	srsf5b	67	62.694	ENSPPRG00000012903	SRSF5	80	70.732	Panthera_pardus
ENSPMAG00000007790	srsf5b	67	62.694	ENSPTIG00000018589	SRSF5	80	70.732	Panthera_tigris_altaica
ENSPMAG00000007790	srsf5b	67	62.694	ENSPTRG00000006488	SRSF5	81	70.732	Pan_troglodytes
ENSPMAG00000007790	srsf5b	67	62.694	ENSPANG00000021091	SRSF5	81	70.732	Papio_anubis
ENSPMAG00000007790	srsf5b	67	62.694	ENSPSIG00000012522	SRSF5	99	52.234	Pelodiscus_sinensis
ENSPMAG00000007790	srsf5b	52	47.205	ENSPMGG00000021646	srsf5b	91	57.664	Periophthalmus_magnuspinnatus
ENSPMAG00000007790	srsf5b	67	62.694	ENSPEMG00000020173	Srsf5	68	61.881	Peromyscus_maniculatus_bairdii
ENSPMAG00000007790	srsf5b	67	62.694	ENSPCIG00000011877	SRSF5	99	52.055	Phascolarctos_cinereus
ENSPMAG00000007790	srsf5b	92	52.768	ENSPFOG00000017700	srsf5b	63	61.111	Poecilia_formosa
ENSPMAG00000007790	srsf5b	92	52.399	ENSPLAG00000006480	srsf5b	63	61.111	Poecilia_latipinna
ENSPMAG00000007790	srsf5b	92	52.768	ENSPMEG00000012751	srsf5b	84	56.204	Poecilia_mexicana
ENSPMAG00000007790	srsf5b	68	61.421	ENSPREG00000010381	srsf5b	63	61.111	Poecilia_reticulata
ENSPMAG00000007790	srsf5b	67	62.694	ENSPPYG00000005945	SRSF5	67	61.881	Pongo_abelii
ENSPMAG00000007790	srsf5b	54	60.256	ENSPCAG00000004405	SRSF5	97	59.627	Procavia_capensis
ENSPMAG00000007790	srsf5b	67	62.694	ENSPCOG00000014442	SRSF5	88	55.634	Propithecus_coquereli
ENSPMAG00000007790	srsf5b	86	57.364	ENSPNYG00000002669	srsf5b	94	56.204	Pundamilia_nyererei
ENSPMAG00000007790	srsf5b	91	54.044	ENSPNAG00000011262	srsf5b	84	56.934	Pygocentrus_nattereri
ENSPMAG00000007790	srsf5b	67	62.694	ENSRNOG00000005513	Srsf5	68	61.881	Rattus_norvegicus
ENSPMAG00000007790	srsf5b	67	62.694	ENSRBIG00000013003	SRSF5	81	70.732	Rhinopithecus_bieti
ENSPMAG00000007790	srsf5b	67	62.694	ENSRROG00000043407	SRSF5	81	70.732	Rhinopithecus_roxellana
ENSPMAG00000007790	srsf5b	67	62.694	ENSSBOG00000030784	SRSF5	81	70.732	Saimiri_boliviensis_boliviensis
ENSPMAG00000007790	srsf5b	67	62.694	ENSSHAG00000002871	SRSF5	99	52.055	Sarcophilus_harrisii
ENSPMAG00000007790	srsf5b	68	58.654	ENSSMAG00000019728	srsf5b	63	59.314	Scophthalmus_maximus
ENSPMAG00000007790	srsf5b	86	55.094	ENSSDUG00000005766	srsf5b	66	63.131	Seriola_dumerili
ENSPMAG00000007790	srsf5b	86	55.094	ENSSLDG00000023255	srsf5b	84	57.664	Seriola_lalandi_dorsalis
ENSPMAG00000007790	srsf5b	67	52.850	ENSSARG00000001059	SRSF5	67	53.465	Sorex_araneus
ENSPMAG00000007790	srsf5b	67	64.767	ENSSPUG00000002464	SRSF5	89	57.746	Sphenodon_punctatus
ENSPMAG00000007790	srsf5b	68	61.929	ENSSPAG00000015325	srsf5b	65	61.616	Stegastes_partitus
ENSPMAG00000007790	srsf5b	67	62.694	ENSSSCG00000032583	SRSF5	99	56.333	Sus_scrofa
ENSPMAG00000007790	srsf5b	67	60.622	ENSTGUG00000011425	SRSF5	99	52.921	Taeniopygia_guttata
ENSPMAG00000007790	srsf5b	68	60.914	ENSTRUG00000017811	srsf5b	60	62.626	Takifugu_rubripes
ENSPMAG00000007790	srsf5b	68	60.406	ENSTNIG00000016411	srsf5b	68	61.111	Tetraodon_nigroviridis
ENSPMAG00000007790	srsf5b	67	60.622	ENSTBEG00000001972	SRSF5	99	50.333	Tupaia_belangeri
ENSPMAG00000007790	srsf5b	66	62.827	ENSTTRG00000003318	SRSF5	99	51.678	Tursiops_truncatus
ENSPMAG00000007790	srsf5b	67	62.694	ENSUAMG00000014184	SRSF5	99	51.667	Ursus_americanus
ENSPMAG00000007790	srsf5b	67	77.419	ENSUMAG00000009827	SRSF5	99	56.333	Ursus_maritimus
ENSPMAG00000007790	srsf5b	67	62.694	ENSVPAG00000006448	SRSF5	67	61.881	Vicugna_pacos
ENSPMAG00000007790	srsf5b	67	62.694	ENSVVUG00000003790	SRSF5	99	51.667	Vulpes_vulpes
ENSPMAG00000007790	srsf5b	68	62.755	ENSXETG00000002211	srsf5	99	53.041	Xenopus_tropicalis
ENSPMAG00000007790	srsf5b	88	53.704	ENSXCOG00000001570	srsf5b	65	61.421	Xiphophorus_couchianus
ENSPMAG00000007790	srsf5b	68	60.914	ENSXMAG00000026416	srsf5b	84	56.204	Xiphophorus_maculatus