EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMAG00000007983 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 6352 bases
Position: chrGL477256:50027-56378
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000008783	zf-C2H2	PF00096.26	1.7e-51	1	8
ENSPMAP00000008783	zf-C2H2	PF00096.26	1.7e-51	2	8
ENSPMAP00000008783	zf-C2H2	PF00096.26	1.7e-51	3	8
ENSPMAP00000008783	zf-C2H2	PF00096.26	1.7e-51	4	8
ENSPMAP00000008783	zf-C2H2	PF00096.26	1.7e-51	5	8
ENSPMAP00000008783	zf-C2H2	PF00096.26	1.7e-51	6	8
ENSPMAP00000008783	zf-C2H2	PF00096.26	1.7e-51	7	8
ENSPMAP00000008783	zf-C2H2	PF00096.26	1.7e-51	8	8
ENSPMAP00000008783	zf-met	PF12874.7	5e-18	1	2
ENSPMAP00000008783	zf-met	PF12874.7	5e-18	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000008822	-	1128	-	ENSPMAP00000008783	376 (aa)	-	S4RU93

Gene Model

Click here to download ENSPMAG00000007983's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000007983's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMAG00000007983	-	81	47.059	ENSPMAG00000000839	-	95	47.059
ENSPMAG00000007983	-	98	44.304	ENSPMAG00000006198	ZBTB47	74	44.304
ENSPMAG00000007983	-	99	38.150	ENSPMAG00000007731	-	91	38.150
ENSPMAG00000007983	-	98	39.378	ENSPMAG00000004344	-	97	39.378
ENSPMAG00000007983	-	85	47.222	ENSPMAG00000007084	-	100	47.222
ENSPMAG00000007983	-	98	30.978	ENSPMAG00000005248	prdm5	99	30.978
ENSPMAG00000007983	-	99	33.113	ENSPMAG00000009794	PRDM15	77	31.902
ENSPMAG00000007983	-	97	37.349	ENSPMAG00000004189	-	99	35.119
ENSPMAG00000007983	-	97	33.621	ENSPMAG00000006708	-	98	33.621
ENSPMAG00000007983	-	97	35.766	ENSPMAG00000007492	-	94	35.766
ENSPMAG00000007983	-	98	36.923	ENSPMAG00000007500	ZNF436	99	36.923
ENSPMAG00000007983	-	99	39.394	ENSPMAG00000000401	-	90	39.394
ENSPMAG00000007983	-	97	43.243	ENSPMAG00000000404	-	100	43.243
ENSPMAG00000007983	-	97	39.716	ENSPMAG00000008879	-	97	39.716
ENSPMAG00000007983	-	97	37.195	ENSPMAG00000008691	-	99	42.593
ENSPMAG00000007983	-	99	30.882	ENSPMAG00000000706	-	100	30.612
ENSPMAG00000007983	-	97	41.727	ENSPMAG00000008196	-	100	41.727
ENSPMAG00000007983	-	98	46.000	ENSPMAG00000004710	znf236	80	38.261
ENSPMAG00000007983	-	97	40.845	ENSPMAG00000001294	-	100	35.043
ENSPMAG00000007983	-	99	44.231	ENSPMAG00000003606	-	87	44.231
ENSPMAG00000007983	-	97	35.897	ENSPMAG00000002022	-	100	35.897

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000007983	-	93	37.037	ENSACIG00000017166	-	88	37.037	Amphilophus_citrinellus
ENSPMAG00000007983	-	81	36.735	ENSAOCG00000018579	-	80	36.735	Amphiprion_ocellaris
ENSPMAG00000007983	-	97	34.109	ENSAPEG00000019755	-	56	34.109	Amphiprion_percula
ENSPMAG00000007983	-	98	39.759	ENSAPEG00000007889	-	76	39.759	Amphiprion_percula
ENSPMAG00000007983	-	98	37.324	ENSAMXG00000032845	-	52	37.324	Astyanax_mexicanus
ENSPMAG00000007983	-	97	34.074	WBGene00021374	Y37E11B.1	89	34.074	Caenorhabditis_elegans
ENSPMAG00000007983	-	98	31.228	ENSCING00000005713	-	73	33.088	Ciona_intestinalis
ENSPMAG00000007983	-	99	33.520	ENSCING00000004861	zf(c2h2)-12	69	34.637	Ciona_intestinalis
ENSPMAG00000007983	-	98	32.624	ENSCING00000000529	zf(btb/c2h2)	58	32.624	Ciona_intestinalis
ENSPMAG00000007983	-	92	31.410	ENSCING00000003384	-	95	31.410	Ciona_intestinalis
ENSPMAG00000007983	-	86	41.667	ENSCSAVG00000003895	-	100	41.667	Ciona_savignyi
ENSPMAG00000007983	-	99	31.415	ENSCSAVG00000009574	-	100	31.892	Ciona_savignyi
ENSPMAG00000007983	-	99	34.637	ENSCSAVG00000005896	-	69	34.637	Ciona_savignyi
ENSPMAG00000007983	-	99	33.523	ENSCSAVG00000006729	-	68	33.523	Ciona_savignyi
ENSPMAG00000007983	-	98	31.288	ENSCSEG00000005491	-	97	31.288	Cynoglossus_semilaevis
ENSPMAG00000007983	-	98	43.662	ENSCVAG00000002295	-	77	43.662	Cyprinodon_variegatus
ENSPMAG00000007983	-	98	36.316	ENSCVAG00000016098	-	98	34.737	Cyprinodon_variegatus
ENSPMAG00000007983	-	70	37.008	ENSCVAG00000019574	-	78	37.008	Cyprinodon_variegatus
ENSPMAG00000007983	-	97	39.806	FBgn0033934	CG17385	79	39.806	Drosophila_melanogaster
ENSPMAG00000007983	-	99	37.324	FBgn0028895	CG17328	52	37.324	Drosophila_melanogaster
ENSPMAG00000007983	-	99	39.801	FBgn0030012	CG18262	59	39.801	Drosophila_melanogaster
ENSPMAG00000007983	-	96	37.500	FBgn0037722	CG8319	62	38.037	Drosophila_melanogaster
ENSPMAG00000007983	-	99	36.339	ENSEBUG00000008392	-	91	36.986	Eptatretus_burgeri
ENSPMAG00000007983	-	99	39.007	ENSEBUG00000000735	-	98	39.007	Eptatretus_burgeri
ENSPMAG00000007983	-	97	44.526	ENSEBUG00000015522	-	70	36.585	Eptatretus_burgeri
ENSPMAG00000007983	-	97	33.766	ENSEBUG00000004841	-	83	40.000	Eptatretus_burgeri
ENSPMAG00000007983	-	99	43.066	ENSELUG00000020794	-	64	43.066	Esox_lucius
ENSPMAG00000007983	-	97	42.056	ENSELUG00000010454	-	63	37.302	Esox_lucius
ENSPMAG00000007983	-	99	36.765	ENSFHEG00000012990	-	97	36.765	Fundulus_heteroclitus
ENSPMAG00000007983	-	99	42.105	ENSFHEG00000020889	-	74	42.105	Fundulus_heteroclitus
ENSPMAG00000007983	-	97	35.789	ENSFHEG00000003596	-	73	37.423	Fundulus_heteroclitus
ENSPMAG00000007983	-	97	42.945	ENSFHEG00000013644	-	75	43.571	Fundulus_heteroclitus
ENSPMAG00000007983	-	97	39.583	ENSGACG00000018415	-	99	39.583	Gasterosteus_aculeatus
ENSPMAG00000007983	-	99	32.716	ENSHCOG00000017437	-	78	36.283	Hippocampus_comes
ENSPMAG00000007983	-	97	38.372	ENSHCOG00000001313	-	54	38.372	Hippocampus_comes
ENSPMAG00000007983	-	97	42.331	ENSHCOG00000014881	-	74	40.299	Hippocampus_comes
ENSPMAG00000007983	-	97	42.500	ENSIPUG00000013526	-	87	42.500	Ictalurus_punctatus
ENSPMAG00000007983	-	99	40.580	ENSKMAG00000012909	-	86	42.500	Kryptolebias_marmoratus
ENSPMAG00000007983	-	97	35.912	ENSKMAG00000007658	-	88	35.912	Kryptolebias_marmoratus
ENSPMAG00000007983	-	82	47.727	ENSLBEG00000026573	-	57	47.727	Labrus_bergylta
ENSPMAG00000007983	-	69	36.458	ENSMMOG00000001961	-	96	36.458	Mola_mola
ENSPMAG00000007983	-	99	37.888	ENSONIG00000003471	-	99	37.576	Oreochromis_niloticus
ENSPMAG00000007983	-	97	39.506	ENSONIG00000003224	-	93	39.506	Oreochromis_niloticus
ENSPMAG00000007983	-	93	45.745	ENSONIG00000007812	-	99	40.120	Oreochromis_niloticus
ENSPMAG00000007983	-	99	35.971	ENSONIG00000016416	-	98	35.971	Oreochromis_niloticus
ENSPMAG00000007983	-	98	40.000	ENSONIG00000009894	-	100	40.000	Oreochromis_niloticus
ENSPMAG00000007983	-	97	38.596	ENSORLG00015018254	-	90	38.596	Oryzias_latipes_hsok
ENSPMAG00000007983	-	97	43.357	ENSOMEG00000017673	-	68	43.357	Oryzias_melastigma
ENSPMAG00000007983	-	99	41.611	ENSPMGG00000000243	-	81	41.611	Periophthalmus_magnuspinnatus
ENSPMAG00000007983	-	97	37.956	ENSPMGG00000000489	-	75	37.956	Periophthalmus_magnuspinnatus
ENSPMAG00000007983	-	98	42.857	ENSPMGG00000000458	-	92	42.857	Periophthalmus_magnuspinnatus
ENSPMAG00000007983	-	99	40.000	ENSPMGG00000000218	-	61	40.000	Periophthalmus_magnuspinnatus
ENSPMAG00000007983	-	98	41.667	ENSPMGG00000022524	-	95	40.230	Periophthalmus_magnuspinnatus
ENSPMAG00000007983	-	98	33.014	ENSPMGG00000010664	-	90	32.782	Periophthalmus_magnuspinnatus
ENSPMAG00000007983	-	99	34.884	ENSPMGG00000019842	-	80	34.884	Periophthalmus_magnuspinnatus
ENSPMAG00000007983	-	97	37.669	ENSPFOG00000002879	-	100	37.669	Poecilia_formosa
ENSPMAG00000007983	-	99	37.681	ENSPFOG00000020691	-	82	35.897	Poecilia_formosa
ENSPMAG00000007983	-	97	37.255	ENSPLAG00000011254	-	57	37.255	Poecilia_latipinna
ENSPMAG00000007983	-	97	34.524	ENSPLAG00000006174	-	79	33.425	Poecilia_latipinna
ENSPMAG00000007983	-	97	37.255	ENSPMEG00000007503	-	59	37.255	Poecilia_mexicana
ENSPMAG00000007983	-	97	41.007	ENSPMEG00000022676	-	99	36.257	Poecilia_mexicana
ENSPMAG00000007983	-	98	40.580	ENSPMEG00000019229	-	66	40.580	Poecilia_mexicana
ENSPMAG00000007983	-	97	36.605	ENSPREG00000016204	-	71	36.605	Poecilia_reticulata
ENSPMAG00000007983	-	99	41.304	ENSPREG00000007146	-	66	41.304	Poecilia_reticulata
ENSPMAG00000007983	-	97	37.857	ENSPREG00000015352	-	84	37.857	Poecilia_reticulata
ENSPMAG00000007983	-	98	35.088	ENSSMAG00000000404	-	87	35.088	Scophthalmus_maximus
ENSPMAG00000007983	-	99	45.833	ENSSDUG00000000946	-	99	46.903	Seriola_dumerili
ENSPMAG00000007983	-	97	42.609	ENSSDUG00000000871	-	91	42.609	Seriola_dumerili
ENSPMAG00000007983	-	97	39.344	ENSSLDG00000002515	-	71	39.344	Seriola_lalandi_dorsalis
ENSPMAG00000007983	-	97	38.636	ENSSLDG00000000464	-	58	38.636	Seriola_lalandi_dorsalis
ENSPMAG00000007983	-	85	38.017	ENSSPAG00000009405	-	57	34.568	Stegastes_partitus
ENSPMAG00000007983	-	99	42.029	ENSTNIG00000008154	-	99	42.029	Tetraodon_nigroviridis
ENSPMAG00000007983	-	98	44.578	ENSXCOG00000005697	-	99	44.578	Xiphophorus_couchianus
ENSPMAG00000007983	-	97	37.762	ENSXMAG00000022242	-	78	38.961	Xiphophorus_maculatus