EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMAG00000008026 (Gene tree)
Gene ID: -
Gene Symbol: SMARCA5 (1 of many)
Alias: -
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 5
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Plus strand
Length: 11732 bases
Position: chrGL482815:5558-17289
Accession: 11101
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000008832	ResIII	PF04851.15	7.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000008871	SMARCA5 (1 of many)-201	1932	-	ENSPMAP00000008832	644 (aa)	-	S4RUE2

Gene Model

Click here to download ENSPMAG00000008026's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000008026's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMAG00000008026	SMARCA5	70	36.884	ENSPMAG00000003516	smarcad1a	50	36.884
ENSPMAG00000008026	SMARCA5	78	32.541	ENSPMAG00000002916	rad54b	67	32.541
ENSPMAG00000008026	SMARCA5	74	49.772	ENSPMAG00000004376	hells	66	45.693
ENSPMAG00000008026	SMARCA5	63	44.084	ENSPMAG00000001030	-	61	44.084
ENSPMAG00000008026	SMARCA5	96	86.246	ENSPMAG00000006011	SMARCA5	63	86.386
ENSPMAG00000008026	SMARCA5	68	30.675	ENSPMAG00000007719	rad54l	64	30.675
ENSPMAG00000008026	SMARCA5	79	43.203	ENSPMAG00000003871	-	99	43.258
ENSPMAG00000008026	SMARCA5	56	43.860	ENSPMAG00000001636	rad54l2	62	43.860

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000008026	SMARCA5	99	86.739	ENSG00000153147	SMARCA5	61	86.739	Homo_sapiens
ENSPMAG00000008026	SMARCA5	99	86.739	ENSAMEG00000009585	SMARCA5	61	86.739	Ailuropoda_melanoleuca
ENSPMAG00000008026	SMARCA5	99	85.145	ENSAPLG00000009206	SMARCA5	67	85.145	Anas_platyrhynchos
ENSPMAG00000008026	SMARCA5	99	85.647	ENSACAG00000003038	SMARCA5	62	85.647	Anolis_carolinensis
ENSPMAG00000008026	SMARCA5	99	86.739	ENSANAG00000019345	SMARCA5	64	86.739	Aotus_nancymaae
ENSPMAG00000008026	SMARCA5	99	86.739	ENSBTAG00000003399	SMARCA5	61	86.739	Bos_taurus
ENSPMAG00000008026	SMARCA5	99	86.739	ENSCJAG00000002735	SMARCA5	61	86.739	Callithrix_jacchus
ENSPMAG00000008026	SMARCA5	99	86.739	ENSCAFG00000007525	SMARCA5	61	86.739	Canis_familiaris
ENSPMAG00000008026	SMARCA5	99	86.739	ENSCAFG00020025641	SMARCA5	61	86.739	Canis_lupus_dingo
ENSPMAG00000008026	SMARCA5	99	84.867	ENSCHIG00000016375	-	62	84.867	Capra_hircus
ENSPMAG00000008026	SMARCA5	99	86.739	ENSCHIG00000013730	-	61	86.739	Capra_hircus
ENSPMAG00000008026	SMARCA5	99	86.739	ENSTSYG00000009954	SMARCA5	64	86.739	Carlito_syrichta
ENSPMAG00000008026	SMARCA5	98	86.783	ENSCAPG00000013747	SMARCA5	61	86.783	Cavia_aperea
ENSPMAG00000008026	SMARCA5	99	86.739	ENSCPOG00000002259	SMARCA5	61	86.739	Cavia_porcellus
ENSPMAG00000008026	SMARCA5	99	86.739	ENSCCAG00000027215	SMARCA5	64	86.739	Cebus_capucinus
ENSPMAG00000008026	SMARCA5	99	86.739	ENSCATG00000044917	SMARCA5	61	86.739	Cercocebus_atys
ENSPMAG00000008026	SMARCA5	99	86.895	ENSCLAG00000006153	SMARCA5	64	86.895	Chinchilla_lanigera
ENSPMAG00000008026	SMARCA5	98	87.281	ENSCSAG00000003448	SMARCA5	65	87.281	Chlorocebus_sabaeus
ENSPMAG00000008026	SMARCA5	84	86.059	ENSCHOG00000011724	SMARCA5	51	86.059	Choloepus_hoffmanni
ENSPMAG00000008026	SMARCA5	99	86.895	ENSCPBG00000027535	SMARCA5	61	86.895	Chrysemys_picta_bellii
ENSPMAG00000008026	SMARCA5	99	86.739	ENSCANG00000041629	SMARCA5	61	86.739	Colobus_angolensis_palliatus
ENSPMAG00000008026	SMARCA5	99	86.895	ENSCGRG00001012719	Smarca5	61	86.895	Cricetulus_griseus_chok1gshd
ENSPMAG00000008026	SMARCA5	99	86.895	ENSCGRG00000001417	Smarca5	64	86.895	Cricetulus_griseus_crigri
ENSPMAG00000008026	SMARCA5	99	83.151	ENSDNOG00000009158	SMARCA5	61	83.151	Dasypus_novemcinctus
ENSPMAG00000008026	SMARCA5	87	87.850	ENSDORG00000003466	Smarca5	62	76.115	Dipodomys_ordii
ENSPMAG00000008026	SMARCA5	98	88.535	ENSEBUG00000014773	SMARCA5	65	88.535	Eptatretus_burgeri
ENSPMAG00000008026	SMARCA5	99	86.739	ENSEASG00005001866	SMARCA5	63	87.340	Equus_asinus_asinus
ENSPMAG00000008026	SMARCA5	99	86.739	ENSECAG00000002676	SMARCA5	61	86.739	Equus_caballus
ENSPMAG00000008026	SMARCA5	95	87.070	ENSEEUG00000013176	SMARCA5	61	87.070	Erinaceus_europaeus
ENSPMAG00000008026	SMARCA5	97	83.732	ENSELUG00000014653	SMARCA5	64	83.732	Esox_lucius
ENSPMAG00000008026	SMARCA5	99	86.739	ENSFCAG00000004544	SMARCA5	61	86.739	Felis_catus
ENSPMAG00000008026	SMARCA5	98	87.281	ENSFALG00000004987	SMARCA5	65	87.281	Ficedula_albicollis
ENSPMAG00000008026	SMARCA5	99	86.739	ENSFDAG00000021016	SMARCA5	64	86.739	Fukomys_damarensis
ENSPMAG00000008026	SMARCA5	99	82.812	ENSGMOG00000007519	SMARCA5	62	82.812	Gadus_morhua
ENSPMAG00000008026	SMARCA5	99	86.739	ENSGALG00000009913	SMARCA5	62	86.739	Gallus_gallus
ENSPMAG00000008026	SMARCA5	99	84.062	ENSGACG00000017238	SMARCA5	62	84.062	Gasterosteus_aculeatus
ENSPMAG00000008026	SMARCA5	99	86.895	ENSGAGG00000019882	SMARCA5	61	86.895	Gopherus_agassizii
ENSPMAG00000008026	SMARCA5	99	86.739	ENSGGOG00000012595	SMARCA5	64	86.739	Gorilla_gorilla
ENSPMAG00000008026	SMARCA5	99	76.911	ENSHGLG00000000317	-	60	76.911	Heterocephalus_glaber_female
ENSPMAG00000008026	SMARCA5	99	86.739	ENSHGLG00000000816	-	61	86.739	Heterocephalus_glaber_female
ENSPMAG00000008026	SMARCA5	99	86.739	ENSHGLG00100018421	-	64	86.739	Heterocephalus_glaber_male
ENSPMAG00000008026	SMARCA5	99	86.895	ENSSTOG00000010683	SMARCA5	61	86.895	Ictidomys_tridecemlineatus
ENSPMAG00000008026	SMARCA5	99	86.895	ENSJJAG00000014965	Smarca5	61	86.895	Jaculus_jaculus
ENSPMAG00000008026	SMARCA5	99	86.427	ENSLACG00000007091	SMARCA5	63	86.427	Latimeria_chalumnae
ENSPMAG00000008026	SMARCA5	99	85.512	ENSLOCG00000008966	SMARCA5	62	85.512	Lepisosteus_oculatus
ENSPMAG00000008026	SMARCA5	99	86.739	ENSLAFG00000007795	SMARCA5	61	86.739	Loxodonta_africana
ENSPMAG00000008026	SMARCA5	99	86.739	ENSMFAG00000043649	SMARCA5	61	86.739	Macaca_fascicularis
ENSPMAG00000008026	SMARCA5	99	86.739	ENSMMUG00000000829	SMARCA5	64	87.261	Macaca_mulatta
ENSPMAG00000008026	SMARCA5	99	86.739	ENSMNEG00000031916	SMARCA5	61	86.739	Macaca_nemestrina
ENSPMAG00000008026	SMARCA5	99	86.739	ENSMLEG00000042393	SMARCA5	61	86.739	Mandrillus_leucophaeus
ENSPMAG00000008026	SMARCA5	99	86.739	ENSMGAG00000003517	SMARCA5	94	87.500	Meleagris_gallopavo
ENSPMAG00000008026	SMARCA5	99	86.895	ENSMAUG00000015902	Smarca5	63	86.895	Mesocricetus_auratus
ENSPMAG00000008026	SMARCA5	99	86.739	ENSMICG00000003971	SMARCA5	65	85.162	Microcebus_murinus
ENSPMAG00000008026	SMARCA5	99	86.739	ENSMOCG00000016986	-	61	86.739	Microtus_ochrogaster
ENSPMAG00000008026	SMARCA5	99	86.583	ENSMODG00000000391	SMARCA5	61	86.583	Monodelphis_domestica
ENSPMAG00000008026	SMARCA5	99	86.739	ENSMUSG00000031715	Smarca5	61	86.739	Mus_musculus
ENSPMAG00000008026	SMARCA5	99	86.895	MGP_PahariEiJ_G0022862	Smarca5	61	86.895	Mus_pahari
ENSPMAG00000008026	SMARCA5	99	86.739	ENSMLUG00000000468	SMARCA5	61	86.739	Myotis_lucifugus
ENSPMAG00000008026	SMARCA5	99	86.895	ENSNGAG00000000441	Smarca5	61	86.895	Nannospalax_galili
ENSPMAG00000008026	SMARCA5	99	86.739	ENSNLEG00000005383	SMARCA5	61	86.739	Nomascus_leucogenys
ENSPMAG00000008026	SMARCA5	98	87.102	ENSMEUG00000001267	SMARCA5	65	87.102	Notamacropus_eugenii
ENSPMAG00000008026	SMARCA5	99	83.463	ENSOPRG00000014427	SMARCA5	62	83.463	Ochotona_princeps
ENSPMAG00000008026	SMARCA5	98	87.122	ENSOANG00000013921	SMARCA5	65	87.122	Ornithorhynchus_anatinus
ENSPMAG00000008026	SMARCA5	98	87.281	ENSOCUG00000013042	SMARCA5	65	87.281	Oryctolagus_cuniculus
ENSPMAG00000008026	SMARCA5	99	86.739	ENSOGAG00000009702	SMARCA5	61	86.739	Otolemur_garnettii
ENSPMAG00000008026	SMARCA5	99	86.739	ENSOARG00000010589	SMARCA5	60	86.739	Ovis_aries
ENSPMAG00000008026	SMARCA5	99	86.739	ENSPPAG00000028523	SMARCA5	64	86.739	Pan_paniscus
ENSPMAG00000008026	SMARCA5	99	80.187	ENSPPRG00000004925	SMARCA5	59	80.187	Panthera_pardus
ENSPMAG00000008026	SMARCA5	99	86.739	ENSPTIG00000020959	SMARCA5	61	86.739	Panthera_tigris_altaica
ENSPMAG00000008026	SMARCA5	99	86.739	ENSPTRG00000016472	SMARCA5	64	86.739	Pan_troglodytes
ENSPMAG00000008026	SMARCA5	99	86.739	ENSPANG00000001175	SMARCA5	61	86.739	Papio_anubis
ENSPMAG00000008026	SMARCA5	99	83.937	ENSPKIG00000015699	SMARCA5	62	83.937	Paramormyrops_kingsleyae
ENSPMAG00000008026	SMARCA5	100	82.998	ENSPKIG00000015885	SMARCA5	65	84.102	Paramormyrops_kingsleyae
ENSPMAG00000008026	SMARCA5	99	84.867	ENSPSIG00000004177	SMARCA5	64	84.867	Pelodiscus_sinensis
ENSPMAG00000008026	SMARCA5	98	84.444	ENSPMGG00000012316	SMARCA5	65	84.444	Periophthalmus_magnuspinnatus
ENSPMAG00000008026	SMARCA5	99	86.895	ENSPEMG00000008060	Smarca5	63	86.895	Peromyscus_maniculatus_bairdii
ENSPMAG00000008026	SMARCA5	99	86.583	ENSPCIG00000003926	SMARCA5	63	86.583	Phascolarctos_cinereus
ENSPMAG00000008026	SMARCA5	99	86.739	ENSPPYG00000015091	SMARCA5	61	86.739	Pongo_abelii
ENSPMAG00000008026	SMARCA5	93	84.053	ENSPCAG00000014230	SMARCA5	60	84.053	Procavia_capensis
ENSPMAG00000008026	SMARCA5	97	86.901	ENSPCOG00000026744	SMARCA5	65	86.624	Propithecus_coquereli
ENSPMAG00000008026	SMARCA5	99	86.583	ENSPVAG00000006482	SMARCA5	61	86.583	Pteropus_vampyrus
ENSPMAG00000008026	SMARCA5	100	84.161	ENSPNAG00000027824	SMARCA5	65	83.696	Pygocentrus_nattereri
ENSPMAG00000008026	SMARCA5	99	86.895	ENSRNOG00000018149	Smarca5	64	86.895	Rattus_norvegicus
ENSPMAG00000008026	SMARCA5	99	86.739	ENSRBIG00000044644	SMARCA5	61	86.739	Rhinopithecus_bieti
ENSPMAG00000008026	SMARCA5	99	86.739	ENSRROG00000029591	SMARCA5	64	86.739	Rhinopithecus_roxellana
ENSPMAG00000008026	SMARCA5	99	86.739	ENSSBOG00000036257	SMARCA5	61	86.739	Saimiri_boliviensis_boliviensis
ENSPMAG00000008026	SMARCA5	99	86.583	ENSSHAG00000008464	SMARCA5	64	86.583	Sarcophilus_harrisii
ENSPMAG00000008026	SMARCA5	100	83.617	ENSSFOG00015013252	SMARCA5	63	83.617	Scleropages_formosus
ENSPMAG00000008026	SMARCA5	99	86.115	ENSSPUG00000007604	SMARCA5	97	87.500	Sphenodon_punctatus
ENSPMAG00000008026	SMARCA5	99	86.739	ENSSSCG00000009047	SMARCA5	64	86.739	Sus_scrofa
ENSPMAG00000008026	SMARCA5	99	86.427	ENSTGUG00000002408	SMARCA5	63	86.427	Taeniopygia_guttata
ENSPMAG00000008026	SMARCA5	99	86.739	ENSUAMG00000023495	SMARCA5	61	86.739	Ursus_americanus
ENSPMAG00000008026	SMARCA5	99	86.739	ENSUMAG00000015324	SMARCA5	62	86.739	Ursus_maritimus
ENSPMAG00000008026	SMARCA5	99	86.583	ENSVPAG00000008982	SMARCA5	61	86.583	Vicugna_pacos
ENSPMAG00000008026	SMARCA5	99	86.739	ENSVVUG00000017473	SMARCA5	61	86.739	Vulpes_vulpes
ENSPMAG00000008026	SMARCA5	99	85.446	ENSXETG00000017566	smarca5	64	85.446	Xenopus_tropicalis