EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000008056 (Gene tree)
Gene ID: -
Gene Symbol: tfb1m
Alias: -
Full Name: transcription factor B1%2C mitochondrial
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 7312 bases
Position: chrGL486191:10245-17556
Accession: ZDB-GENE-060929-1010
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000008859	RrnaAD	PF00398.20	2.8e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000008898	-	672	-	ENSPMAP00000008859	224 (aa)	-	S4RUG9

Gene Model

Click here to download ENSPMAG00000008056's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000008056's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000008056	tfb1m	99	55.656	ENSG00000029639	TFB1M	57	59.391	Homo_sapiens
ENSPMAG00000008056	tfb1m	92	60.870	ENSAPOG00000015493	tfb1m	55	62.437	Acanthochromis_polyacanthus
ENSPMAG00000008056	tfb1m	100	54.018	ENSAMEG00000012761	TFB1M	57	58.883	Ailuropoda_melanoleuca
ENSPMAG00000008056	tfb1m	93	61.244	ENSACIG00000014290	tfb1m	56	62.944	Amphilophus_citrinellus
ENSPMAG00000008056	tfb1m	92	60.680	ENSAOCG00000004027	tfb1m	55	62.245	Amphiprion_ocellaris
ENSPMAG00000008056	tfb1m	89	61.500	ENSAPEG00000020359	tfb1m	55	61.735	Amphiprion_percula
ENSPMAG00000008056	tfb1m	88	64.975	ENSATEG00000006826	tfb1m	56	64.975	Anabas_testudineus
ENSPMAG00000008056	tfb1m	97	56.682	ENSAPLG00000006328	TFB1M	56	59.898	Anas_platyrhynchos
ENSPMAG00000008056	tfb1m	89	60.000	ENSACAG00000005244	TFB1M	57	60.101	Anolis_carolinensis
ENSPMAG00000008056	tfb1m	88	59.898	ENSANAG00000021469	TFB1M	57	59.898	Aotus_nancymaae
ENSPMAG00000008056	tfb1m	92	61.836	ENSACLG00000018734	tfb1m	54	63.452	Astatotilapia_calliptera
ENSPMAG00000008056	tfb1m	89	62.500	ENSAMXG00000036128	tfb1m	53	62.944	Astyanax_mexicanus
ENSPMAG00000008056	tfb1m	88	58.883	ENSBTAG00000031895	TFB1M	57	58.883	Bos_taurus
ENSPMAG00000008056	tfb1m	93	37.799	WBGene00020189	tfbm-1	53	38.776	Caenorhabditis_elegans
ENSPMAG00000008056	tfb1m	88	60.914	ENSCJAG00000012540	TFB1M	57	60.914	Callithrix_jacchus
ENSPMAG00000008056	tfb1m	91	58.128	ENSCAFG00000000581	TFB1M	57	59.898	Canis_familiaris
ENSPMAG00000008056	tfb1m	91	58.128	ENSCAFG00020015224	TFB1M	57	59.898	Canis_lupus_dingo
ENSPMAG00000008056	tfb1m	88	59.391	ENSCHIG00000017013	TFB1M	59	59.391	Capra_hircus
ENSPMAG00000008056	tfb1m	96	55.140	ENSTSYG00000012298	TFB1M	57	58.883	Carlito_syrichta
ENSPMAG00000008056	tfb1m	67	52.667	ENSCAPG00000013843	TFB1M	62	52.667	Cavia_aperea
ENSPMAG00000008056	tfb1m	98	55.251	ENSCPOG00000030422	TFB1M	57	58.883	Cavia_porcellus
ENSPMAG00000008056	tfb1m	99	54.709	ENSCCAG00000015250	TFB1M	57	59.898	Cebus_capucinus
ENSPMAG00000008056	tfb1m	85	40.314	ENSCATG00000009009	TFB1M	54	41.622	Cercocebus_atys
ENSPMAG00000008056	tfb1m	97	58.257	ENSCLAG00000004500	TFB1M	57	61.421	Chinchilla_lanigera
ENSPMAG00000008056	tfb1m	86	59.585	ENSCSAG00000013259	TFB1M	57	59.391	Chlorocebus_sabaeus
ENSPMAG00000008056	tfb1m	99	52.941	ENSCHOG00000011245	TFB1M	57	57.360	Choloepus_hoffmanni
ENSPMAG00000008056	tfb1m	97	59.633	ENSCPBG00000016320	TFB1M	57	62.944	Chrysemys_picta_bellii
ENSPMAG00000008056	tfb1m	93	58.373	ENSCANG00000029768	TFB1M	58	60.406	Colobus_angolensis_palliatus
ENSPMAG00000008056	tfb1m	98	54.545	ENSCGRG00001022866	Tfb1m	57	57.360	Cricetulus_griseus_chok1gshd
ENSPMAG00000008056	tfb1m	98	54.545	ENSCGRG00000018084	Tfb1m	60	57.360	Cricetulus_griseus_crigri
ENSPMAG00000008056	tfb1m	88	63.452	ENSCSEG00000000131	tfb1m	56	63.265	Cynoglossus_semilaevis
ENSPMAG00000008056	tfb1m	93	63.942	ENSCVAG00000009201	tfb1m	56	65.482	Cyprinodon_variegatus
ENSPMAG00000008056	tfb1m	88	59.898	ENSDARG00000040727	tfb1m	77	59.898	Danio_rerio
ENSPMAG00000008056	tfb1m	79	50.282	ENSDNOG00000032672	-	59	50.282	Dasypus_novemcinctus
ENSPMAG00000008056	tfb1m	88	58.883	ENSDNOG00000015984	-	54	58.883	Dasypus_novemcinctus
ENSPMAG00000008056	tfb1m	91	57.843	ENSDORG00000012938	Tfb1m	57	59.898	Dipodomys_ordii
ENSPMAG00000008056	tfb1m	84	49.735	FBgn0261381	mtTFB1	57	49.735	Drosophila_melanogaster
ENSPMAG00000008056	tfb1m	87	56.923	ENSEBUG00000010530	tfb1m	56	56.853	Eptatretus_burgeri
ENSPMAG00000008056	tfb1m	91	57.143	ENSEASG00005018887	TFB1M	56	58.883	Equus_asinus_asinus
ENSPMAG00000008056	tfb1m	91	58.128	ENSECAG00000020997	TFB1M	56	59.898	Equus_caballus
ENSPMAG00000008056	tfb1m	88	59.898	ENSEEUG00000014899	TFB1M	58	59.898	Erinaceus_europaeus
ENSPMAG00000008056	tfb1m	93	63.158	ENSELUG00000002752	tfb1m	50	64.975	Esox_lucius
ENSPMAG00000008056	tfb1m	92	55.825	ENSFCAG00000038785	TFB1M	57	57.868	Felis_catus
ENSPMAG00000008056	tfb1m	97	55.963	ENSFALG00000012500	TFB1M	56	59.391	Ficedula_albicollis
ENSPMAG00000008056	tfb1m	88	60.714	ENSFDAG00000016985	TFB1M	57	60.406	Fukomys_damarensis
ENSPMAG00000008056	tfb1m	93	63.462	ENSFHEG00000008407	tfb1m	56	64.975	Fundulus_heteroclitus
ENSPMAG00000008056	tfb1m	93	63.636	ENSGMOG00000018738	tfb1m	56	65.990	Gadus_morhua
ENSPMAG00000008056	tfb1m	97	55.505	ENSGALG00000013647	TFB1M	56	59.694	Gallus_gallus
ENSPMAG00000008056	tfb1m	93	61.538	ENSGAFG00000017997	tfb1m	56	63.452	Gambusia_affinis
ENSPMAG00000008056	tfb1m	92	62.802	ENSGACG00000006884	tfb1m	55	64.467	Gasterosteus_aculeatus
ENSPMAG00000008056	tfb1m	96	58.333	ENSGAGG00000025345	TFB1M	57	61.421	Gopherus_agassizii
ENSPMAG00000008056	tfb1m	99	55.656	ENSGGOG00000012189	TFB1M	57	59.391	Gorilla_gorilla
ENSPMAG00000008056	tfb1m	92	61.836	ENSHBUG00000019396	tfb1m	54	63.452	Haplochromis_burtoni
ENSPMAG00000008056	tfb1m	89	59.000	ENSHGLG00000002028	TFB1M	56	59.391	Heterocephalus_glaber_female
ENSPMAG00000008056	tfb1m	89	59.000	ENSHGLG00100001412	TFB1M	56	59.391	Heterocephalus_glaber_male
ENSPMAG00000008056	tfb1m	95	57.746	ENSHCOG00000014135	tfb1m	56	60.406	Hippocampus_comes
ENSPMAG00000008056	tfb1m	93	60.577	ENSIPUG00000010964	tfb1m	57	62.437	Ictalurus_punctatus
ENSPMAG00000008056	tfb1m	92	58.252	ENSSTOG00000026264	TFB1M	57	60.406	Ictidomys_tridecemlineatus
ENSPMAG00000008056	tfb1m	94	56.190	ENSJJAG00000022171	Tfb1m	55	58.883	Jaculus_jaculus
ENSPMAG00000008056	tfb1m	93	59.135	ENSKMAG00000012667	tfb1m	56	60.914	Kryptolebias_marmoratus
ENSPMAG00000008056	tfb1m	93	60.577	ENSLBEG00000011505	tfb1m	55	62.944	Labrus_bergylta
ENSPMAG00000008056	tfb1m	90	63.861	ENSLACG00000012594	TFB1M	55	64.796	Latimeria_chalumnae
ENSPMAG00000008056	tfb1m	89	57.143	ENSLOCG00000016850	tfb1m	57	57.500	Lepisosteus_oculatus
ENSPMAG00000008056	tfb1m	88	60.714	ENSLAFG00000014035	-	57	60.406	Loxodonta_africana
ENSPMAG00000008056	tfb1m	86	47.396	ENSLAFG00000032309	-	57	47.396	Loxodonta_africana
ENSPMAG00000008056	tfb1m	91	58.621	ENSMFAG00000031968	TFB1M	57	60.406	Macaca_fascicularis
ENSPMAG00000008056	tfb1m	91	58.128	ENSMMUG00000011171	TFB1M	57	59.898	Macaca_mulatta
ENSPMAG00000008056	tfb1m	91	58.128	ENSMNEG00000042278	TFB1M	57	59.898	Macaca_nemestrina
ENSPMAG00000008056	tfb1m	91	58.128	ENSMLEG00000000044	TFB1M	57	59.898	Mandrillus_leucophaeus
ENSPMAG00000008056	tfb1m	90	63.184	ENSMAMG00000009423	tfb1m	55	63.452	Mastacembelus_armatus
ENSPMAG00000008056	tfb1m	92	61.836	ENSMZEG00005005640	tfb1m	52	63.452	Maylandia_zebra
ENSPMAG00000008056	tfb1m	60	67.407	ENSMGAG00000012779	TFB1M	51	67.407	Meleagris_gallopavo
ENSPMAG00000008056	tfb1m	98	55.708	ENSMAUG00000006705	Tfb1m	57	59.184	Mesocricetus_auratus
ENSPMAG00000008056	tfb1m	91	57.143	ENSMICG00000045849	TFB1M	57	58.883	Microcebus_murinus
ENSPMAG00000008056	tfb1m	88	59.694	ENSMOCG00000013879	Tfb1m	57	59.391	Microtus_ochrogaster
ENSPMAG00000008056	tfb1m	95	61.502	ENSMMOG00000002203	tfb1m	55	63.452	Mola_mola
ENSPMAG00000008056	tfb1m	88	60.204	ENSMODG00000008169	TFB1M	57	59.898	Monodelphis_domestica
ENSPMAG00000008056	tfb1m	90	61.692	ENSMALG00000011657	tfb1m	52	61.616	Monopterus_albus
ENSPMAG00000008056	tfb1m	98	54.545	MGP_CAROLIEiJ_G0021018	Tfb1m	57	59.391	Mus_caroli
ENSPMAG00000008056	tfb1m	98	54.091	ENSMUSG00000036983	Tfb1m	57	58.883	Mus_musculus
ENSPMAG00000008056	tfb1m	88	58.673	MGP_PahariEiJ_G0023336	Tfb1m	57	58.376	Mus_pahari
ENSPMAG00000008056	tfb1m	98	54.091	MGP_SPRETEiJ_G0021923	Tfb1m	57	58.883	Mus_spretus
ENSPMAG00000008056	tfb1m	91	56.650	ENSMPUG00000002073	TFB1M	57	58.376	Mustela_putorius_furo
ENSPMAG00000008056	tfb1m	89	59.000	ENSMLUG00000011329	TFB1M	57	59.898	Myotis_lucifugus
ENSPMAG00000008056	tfb1m	99	55.204	ENSNGAG00000015154	Tfb1m	55	58.883	Nannospalax_galili
ENSPMAG00000008056	tfb1m	92	61.353	ENSNBRG00000009004	tfb1m	55	62.944	Neolamprologus_brichardi
ENSPMAG00000008056	tfb1m	99	56.561	ENSNLEG00000034352	TFB1M	57	60.406	Nomascus_leucogenys
ENSPMAG00000008056	tfb1m	93	55.981	ENSMEUG00000001699	-	59	58.673	Notamacropus_eugenii
ENSPMAG00000008056	tfb1m	96	58.605	ENSODEG00000005915	TFB1M	57	61.421	Octodon_degus
ENSPMAG00000008056	tfb1m	92	62.319	ENSONIG00000008109	tfb1m	57	63.959	Oreochromis_niloticus
ENSPMAG00000008056	tfb1m	89	59.000	ENSOCUG00000012154	TFB1M	57	59.898	Oryctolagus_cuniculus
ENSPMAG00000008056	tfb1m	90	63.184	ENSORLG00020002250	tfb1m	57	63.452	Oryzias_latipes_hni
ENSPMAG00000008056	tfb1m	88	62.437	ENSORLG00015016067	tfb1m	57	62.437	Oryzias_latipes_hsok
ENSPMAG00000008056	tfb1m	90	62.189	ENSOMEG00000015641	tfb1m	56	62.437	Oryzias_melastigma
ENSPMAG00000008056	tfb1m	97	57.604	ENSOGAG00000011681	TFB1M	57	60.406	Otolemur_garnettii
ENSPMAG00000008056	tfb1m	88	58.500	ENSOARG00000004216	TFB1M	59	58.500	Ovis_aries
ENSPMAG00000008056	tfb1m	99	55.656	ENSPPAG00000030834	TFB1M	57	59.391	Pan_paniscus
ENSPMAG00000008056	tfb1m	92	55.825	ENSPPRG00000013578	TFB1M	57	57.868	Panthera_pardus
ENSPMAG00000008056	tfb1m	92	55.825	ENSPTIG00000003540	TFB1M	57	57.868	Panthera_tigris_altaica
ENSPMAG00000008056	tfb1m	99	55.656	ENSPTRG00000018730	TFB1M	57	59.391	Pan_troglodytes
ENSPMAG00000008056	tfb1m	91	58.621	ENSPANG00000007489	TFB1M	57	60.406	Papio_anubis
ENSPMAG00000008056	tfb1m	100	57.143	ENSPKIG00000021117	tfb1m	56	61.616	Paramormyrops_kingsleyae
ENSPMAG00000008056	tfb1m	95	58.019	ENSPSIG00000006643	TFB1M	57	60.914	Pelodiscus_sinensis
ENSPMAG00000008056	tfb1m	88	60.914	ENSPMGG00000011289	tfb1m	56	60.914	Periophthalmus_magnuspinnatus
ENSPMAG00000008056	tfb1m	93	56.938	ENSPEMG00000010410	Tfb1m	57	58.883	Peromyscus_maniculatus_bairdii
ENSPMAG00000008056	tfb1m	92	58.049	ENSPCIG00000001010	TFB1M	55	59.898	Phascolarctos_cinereus
ENSPMAG00000008056	tfb1m	93	61.538	ENSPFOG00000005139	tfb1m	55	63.452	Poecilia_formosa
ENSPMAG00000008056	tfb1m	93	61.538	ENSPLAG00000021410	tfb1m	56	63.452	Poecilia_latipinna
ENSPMAG00000008056	tfb1m	93	61.538	ENSPMEG00000020166	tfb1m	56	63.452	Poecilia_mexicana
ENSPMAG00000008056	tfb1m	93	62.019	ENSPREG00000022392	tfb1m	56	63.959	Poecilia_reticulata
ENSPMAG00000008056	tfb1m	99	52.703	ENSPPYG00000017123	TFB1M	57	56.566	Pongo_abelii
ENSPMAG00000008056	tfb1m	91	44.335	ENSPCAG00000007078	TFB1M	65	45.685	Procavia_capensis
ENSPMAG00000008056	tfb1m	91	57.635	ENSPCOG00000028453	TFB1M	57	59.391	Propithecus_coquereli
ENSPMAG00000008056	tfb1m	89	59.000	ENSPVAG00000015818	TFB1M	57	59.898	Pteropus_vampyrus
ENSPMAG00000008056	tfb1m	92	61.353	ENSPNYG00000007330	tfb1m	54	62.944	Pundamilia_nyererei
ENSPMAG00000008056	tfb1m	90	62.376	ENSPNAG00000007507	tfb1m	56	63.452	Pygocentrus_nattereri
ENSPMAG00000008056	tfb1m	97	56.221	ENSRNOG00000056223	Tfb1m	57	59.898	Rattus_norvegicus
ENSPMAG00000008056	tfb1m	93	58.373	ENSRBIG00000039975	TFB1M	58	60.406	Rhinopithecus_bieti
ENSPMAG00000008056	tfb1m	93	57.895	ENSRROG00000033802	TFB1M	58	59.898	Rhinopithecus_roxellana
ENSPMAG00000008056	tfb1m	99	54.260	ENSSBOG00000008663	TFB1M	57	59.391	Saimiri_boliviensis_boliviensis
ENSPMAG00000008056	tfb1m	99	54.054	ENSSHAG00000013259	TFB1M	57	59.694	Sarcophilus_harrisii
ENSPMAG00000008056	tfb1m	97	60.829	ENSSFOG00015009739	tfb1m	56	64.286	Scleropages_formosus
ENSPMAG00000008056	tfb1m	93	63.636	ENSSMAG00000008229	tfb1m	56	64.975	Scophthalmus_maximus
ENSPMAG00000008056	tfb1m	90	63.682	ENSSDUG00000011871	tfb1m	55	64.467	Seriola_dumerili
ENSPMAG00000008056	tfb1m	92	62.621	ENSSLDG00000023923	tfb1m	55	64.467	Seriola_lalandi_dorsalis
ENSPMAG00000008056	tfb1m	90	57.426	ENSSPUG00000015253	TFB1M	57	58.081	Sphenodon_punctatus
ENSPMAG00000008056	tfb1m	95	60.563	ENSSPAG00000019515	tfb1m	55	62.944	Stegastes_partitus
ENSPMAG00000008056	tfb1m	88	59.391	ENSSSCG00000024361	TFB1M	58	59.391	Sus_scrofa
ENSPMAG00000008056	tfb1m	96	56.944	ENSTGUG00000011136	TFB1M	57	59.391	Taeniopygia_guttata
ENSPMAG00000008056	tfb1m	93	59.809	ENSTRUG00000020334	tfb1m	55	61.421	Takifugu_rubripes
ENSPMAG00000008056	tfb1m	89	58.000	ENSTBEG00000008769	TFB1M	57	58.883	Tupaia_belangeri
ENSPMAG00000008056	tfb1m	89	59.296	ENSTTRG00000006327	TFB1M	58	59.898	Tursiops_truncatus
ENSPMAG00000008056	tfb1m	88	59.694	ENSUAMG00000017802	TFB1M	56	59.391	Ursus_americanus
ENSPMAG00000008056	tfb1m	97	55.963	ENSUMAG00000013377	TFB1M	51	59.898	Ursus_maritimus
ENSPMAG00000008056	tfb1m	93	57.212	ENSVPAG00000010148	TFB1M	58	58.376	Vicugna_pacos
ENSPMAG00000008056	tfb1m	91	58.128	ENSVVUG00000007643	TFB1M	57	59.898	Vulpes_vulpes
ENSPMAG00000008056	tfb1m	99	57.014	ENSXETG00000007852	tfb1m	57	60.914	Xenopus_tropicalis
ENSPMAG00000008056	tfb1m	93	62.019	ENSXCOG00000013230	tfb1m	56	63.959	Xiphophorus_couchianus
ENSPMAG00000008056	tfb1m	93	62.019	ENSXMAG00000019222	tfb1m	56	63.959	Xiphophorus_maculatus