EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000008077 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Plus strand
Length: 5104 bases
Position: chrGL479459:41812-46915
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000008892	RRM_1	PF00076.22	1.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000008931	-	822	-	ENSPMAP00000008892	274 (aa)	-	S4RUK2

Gene Model

Click here to download ENSPMAG00000008077's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000008077's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000008077	-	64	38.122	ENSG00000149532	CPSF7	100	35.484	Homo_sapiens
ENSPMAG00000008077	-	68	51.323	ENSG00000111605	CPSF6	88	36.842	Homo_sapiens
ENSPMAG00000008077	-	68	51.323	ENSAMEG00000011781	CPSF6	51	41.638	Ailuropoda_melanoleuca
ENSPMAG00000008077	-	68	49.198	ENSAOCG00000017865	cpsf6	50	42.466	Amphiprion_ocellaris
ENSPMAG00000008077	-	68	51.323	ENSCPOG00000015201	CPSF6	50	42.466	Cavia_porcellus
ENSPMAG00000008077	-	68	50.794	ENSCPBG00000013322	CPSF6	50	42.466	Chrysemys_picta_bellii
ENSPMAG00000008077	-	68	49.735	ENSCSEG00000008967	cpsf6	50	42.905	Cynoglossus_semilaevis
ENSPMAG00000008077	-	68	49.735	ENSCVAG00000014857	cpsf6	50	44.178	Cyprinodon_variegatus
ENSPMAG00000008077	-	63	50.575	ENSFHEG00000019693	cpsf6	52	41.391	Fundulus_heteroclitus
ENSPMAG00000008077	-	68	49.738	ENSGACG00000019685	cpsf6	50	44.027	Gasterosteus_aculeatus
ENSPMAG00000008077	-	68	50.794	ENSGAGG00000010228	CPSF6	50	42.466	Gopherus_agassizii
ENSPMAG00000008077	-	68	49.198	ENSHBUG00000005998	cpsf6	50	42.466	Haplochromis_burtoni
ENSPMAG00000008077	-	68	51.323	ENSHGLG00000000792	CPSF6	50	42.466	Heterocephalus_glaber_female
ENSPMAG00000008077	-	68	48.663	ENSKMAG00000014794	cpsf6	51	42.808	Kryptolebias_marmoratus
ENSPMAG00000008077	-	82	46.256	ENSLACG00000008625	CPSF6	50	42.123	Latimeria_chalumnae
ENSPMAG00000008077	-	63	50.276	ENSMAMG00000010385	cpsf6	50	42.424	Mastacembelus_armatus
ENSPMAG00000008077	-	68	49.198	ENSMZEG00005007975	cpsf6	50	42.466	Maylandia_zebra
ENSPMAG00000008077	-	68	49.198	ENSNBRG00000004089	cpsf6	50	42.466	Neolamprologus_brichardi
ENSPMAG00000008077	-	68	50.794	ENSODEG00000018399	-	50	42.123	Octodon_degus
ENSPMAG00000008077	-	67	48.649	ENSONIG00000011702	cpsf6	50	43.151	Oreochromis_niloticus
ENSPMAG00000008077	-	68	49.215	ENSORLG00000013893	cpsf6	50	41.806	Oryzias_latipes
ENSPMAG00000008077	-	68	49.215	ENSORLG00020016593	cpsf6	50	41.806	Oryzias_latipes_hni
ENSPMAG00000008077	-	68	49.215	ENSORLG00015015558	cpsf6	50	41.806	Oryzias_latipes_hsok
ENSPMAG00000008077	-	68	49.206	ENSOMEG00000009425	cpsf6	51	42.712	Oryzias_melastigma
ENSPMAG00000008077	-	68	49.468	ENSPKIG00000022613	CPSF6	51	43.151	Paramormyrops_kingsleyae
ENSPMAG00000008077	-	68	49.198	ENSPLAG00000005715	cpsf6	50	42.568	Poecilia_latipinna
ENSPMAG00000008077	-	68	49.198	ENSPMEG00000001353	cpsf6	50	42.568	Poecilia_mexicana
ENSPMAG00000008077	-	68	49.198	ENSPREG00000004417	cpsf6	51	42.230	Poecilia_reticulata
ENSPMAG00000008077	-	68	49.733	ENSPNAG00000024098	CPSF6	50	43.103	Pygocentrus_nattereri
ENSPMAG00000008077	-	63	50.857	ENSSDUG00000005024	cpsf6	50	42.955	Seriola_dumerili
ENSPMAG00000008077	-	63	50.857	ENSSLDG00000009042	cpsf6	50	42.955	Seriola_lalandi_dorsalis
ENSPMAG00000008077	-	68	49.198	ENSSPAG00000013906	cpsf6	50	42.808	Stegastes_partitus
ENSPMAG00000008077	-	68	50.267	ENSTNIG00000007576	cpsf6	50	42.955	Tetraodon_nigroviridis
ENSPMAG00000008077	-	64	39.888	ENSXETG00000006715	cpsf7	55	39.888	Xenopus_tropicalis
ENSPMAG00000008077	-	68	49.198	ENSXCOG00000013423	cpsf6	50	42.568	Xiphophorus_couchianus