EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMAG00000008148 (Gene tree)
Gene ID: -
Gene Symbol: sall1b
Alias: -
Full Name: spalt-like transcription factor 1b
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 6857 bases
Position: chrGL478140:64539-71395
Accession: ZDB-GENE-020228-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000008969	zf-C2H2	PF00096.26	2e-30	1	6
ENSPMAP00000008969	zf-C2H2	PF00096.26	2e-30	2	6
ENSPMAP00000008969	zf-C2H2	PF00096.26	2e-30	3	6
ENSPMAP00000008969	zf-C2H2	PF00096.26	2e-30	4	6
ENSPMAP00000008969	zf-C2H2	PF00096.26	2e-30	5	6
ENSPMAP00000008969	zf-C2H2	PF00096.26	2e-30	6	6
ENSPMAP00000008969	zf-met	PF12874.7	5.3e-21	1	3
ENSPMAP00000008969	zf-met	PF12874.7	5.3e-21	2	3
ENSPMAP00000008969	zf-met	PF12874.7	5.3e-21	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000009008	-	3999	-	ENSPMAP00000008969	1332 (aa)	-	S4RUS9

Gene Model

Click here to download ENSPMAG00000008148's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000008148's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMAG00000008148	sall1b	58	52.083	ENSPMAG00000004710	znf236	66	52.083

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000008148	sall1b	99	51.770	ENSG00000103449	SALL1	99	51.230	Homo_sapiens
ENSPMAG00000008148	sall1b	99	51.001	ENSAMEG00000006817	SALL1	99	51.290	Ailuropoda_melanoleuca
ENSPMAG00000008148	sall1b	73	54.196	ENSACIG00000004231	sall1a	97	48.237	Amphilophus_citrinellus
ENSPMAG00000008148	sall1b	96	49.438	ENSATEG00000003006	sall1a	97	48.835	Anabas_testudineus
ENSPMAG00000008148	sall1b	99	51.037	ENSAPLG00000003356	SALL1	99	51.261	Anas_platyrhynchos
ENSPMAG00000008148	sall1b	98	51.409	ENSACAG00000014399	SALL1	96	51.180	Anolis_carolinensis
ENSPMAG00000008148	sall1b	99	51.345	ENSANAG00000027238	SALL1	99	50.906	Aotus_nancymaae
ENSPMAG00000008148	sall1b	73	54.453	ENSACLG00000017148	sall1a	99	49.048	Astatotilapia_calliptera
ENSPMAG00000008148	sall1b	99	51.195	ENSBTAG00000008544	SALL1	99	50.329	Bos_taurus
ENSPMAG00000008148	sall1b	99	51.351	ENSCJAG00000001740	SALL1	99	51.048	Callithrix_jacchus
ENSPMAG00000008148	sall1b	97	65.385	ENSCAFG00000009755	SALL1	99	65.385	Canis_familiaris
ENSPMAG00000008148	sall1b	88	54.568	ENSCAFG00020002842	SALL1	99	50.726	Canis_lupus_dingo
ENSPMAG00000008148	sall1b	99	51.762	ENSCHIG00000026074	SALL1	99	51.375	Capra_hircus
ENSPMAG00000008148	sall1b	99	51.506	ENSTSYG00000029464	SALL1	99	51.732	Carlito_syrichta
ENSPMAG00000008148	sall1b	97	52.556	ENSCPOG00000006564	SALL1	98	52.600	Cavia_porcellus
ENSPMAG00000008148	sall1b	99	50.444	ENSCCAG00000001639	SALL1	99	50.182	Cebus_capucinus
ENSPMAG00000008148	sall1b	99	51.737	ENSCATG00000004982	SALL1	99	51.278	Cercocebus_atys
ENSPMAG00000008148	sall1b	99	51.988	ENSCLAG00000006380	SALL1	99	51.495	Chinchilla_lanigera
ENSPMAG00000008148	sall1b	99	51.034	ENSCSAG00000005319	SALL1	99	50.548	Chlorocebus_sabaeus
ENSPMAG00000008148	sall1b	57	65.385	ENSCHOG00000000800	-	60	65.385	Choloepus_hoffmanni
ENSPMAG00000008148	sall1b	89	65.385	ENSCPBG00000015924	SALL1	58	65.385	Chrysemys_picta_bellii
ENSPMAG00000008148	sall1b	99	51.589	ENSCANG00000036664	SALL1	99	51.528	Colobus_angolensis_palliatus
ENSPMAG00000008148	sall1b	99	50.477	ENSCGRG00001023314	-	99	50.658	Cricetulus_griseus_chok1gshd
ENSPMAG00000008148	sall1b	96	51.203	ENSCGRG00000009496	Sall1	98	51.386	Cricetulus_griseus_crigri
ENSPMAG00000008148	sall1b	96	47.875	ENSCSEG00000009349	sall1a	97	48.112	Cynoglossus_semilaevis
ENSPMAG00000008148	sall1b	89	58.929	ENSCVAG00000020513	sall1a	63	63.462	Cyprinodon_variegatus
ENSPMAG00000008148	sall1b	99	51.805	ENSDNOG00000016413	SALL1	99	51.320	Dasypus_novemcinctus
ENSPMAG00000008148	sall1b	98	51.615	ENSETEG00000015150	SALL1	98	51.094	Echinops_telfairi
ENSPMAG00000008148	sall1b	96	39.097	ENSEBUG00000008798	SALL1	53	61.538	Eptatretus_burgeri
ENSPMAG00000008148	sall1b	89	67.308	ENSEBUG00000011732	SALL1	95	67.308	Eptatretus_burgeri
ENSPMAG00000008148	sall1b	99	51.926	ENSEASG00005014602	SALL1	99	50.842	Equus_asinus_asinus
ENSPMAG00000008148	sall1b	89	65.385	ENSECAG00000011334	SALL1	98	65.385	Equus_caballus
ENSPMAG00000008148	sall1b	96	52.528	ENSEEUG00000002014	SALL1	98	52.636	Erinaceus_europaeus
ENSPMAG00000008148	sall1b	71	45.216	ENSELUG00000017774	-	53	43.812	Esox_lucius
ENSPMAG00000008148	sall1b	99	51.032	ENSFCAG00000024654	SALL1	99	51.246	Felis_catus
ENSPMAG00000008148	sall1b	99	51.257	ENSFALG00000000074	SALL1	99	51.142	Ficedula_albicollis
ENSPMAG00000008148	sall1b	72	63.462	ENSFHEG00000008424	-	69	70.312	Fundulus_heteroclitus
ENSPMAG00000008148	sall1b	97	48.586	ENSFHEG00000012579	sall1a	97	47.985	Fundulus_heteroclitus
ENSPMAG00000008148	sall1b	97	42.710	ENSGMOG00000013383	-	91	65.385	Gadus_morhua
ENSPMAG00000008148	sall1b	99	51.549	ENSGALG00000039238	SALL1	99	51.363	Gallus_gallus
ENSPMAG00000008148	sall1b	98	48.349	ENSGAFG00000009964	sall1a	99	47.609	Gambusia_affinis
ENSPMAG00000008148	sall1b	88	54.828	ENSGGOG00000000663	SALL1	99	51.087	Gorilla_gorilla
ENSPMAG00000008148	sall1b	73	54.352	ENSHBUG00000022005	sall1a	97	49.878	Haplochromis_burtoni
ENSPMAG00000008148	sall1b	99	51.882	ENSHGLG00000004288	-	99	51.245	Heterocephalus_glaber_female
ENSPMAG00000008148	sall1b	99	51.882	ENSHGLG00100017496	SALL1	99	51.245	Heterocephalus_glaber_male
ENSPMAG00000008148	sall1b	97	48.000	ENSHCOG00000000974	sall1a	52	54.202	Hippocampus_comes
ENSPMAG00000008148	sall1b	96	61.538	ENSIPUG00000022928	sall1b	91	61.538	Ictalurus_punctatus
ENSPMAG00000008148	sall1b	99	51.477	ENSSTOG00000020885	SALL1	99	50.766	Ictidomys_tridecemlineatus
ENSPMAG00000008148	sall1b	97	48.989	ENSKMAG00000016681	sall1a	97	48.394	Kryptolebias_marmoratus
ENSPMAG00000008148	sall1b	98	49.925	ENSLACG00000003556	SALL1	99	49.963	Latimeria_chalumnae
ENSPMAG00000008148	sall1b	91	35.914	ENSLACG00000014018	-	88	63.462	Latimeria_chalumnae
ENSPMAG00000008148	sall1b	97	51.618	ENSLOCG00000007283	sall1b	51	59.065	Lepisosteus_oculatus
ENSPMAG00000008148	sall1b	99	51.549	ENSMFAG00000003298	SALL1	99	51.524	Macaca_fascicularis
ENSPMAG00000008148	sall1b	88	54.996	ENSMMUG00000017200	SALL1	95	54.078	Macaca_mulatta
ENSPMAG00000008148	sall1b	88	55.080	ENSMNEG00000034770	SALL1	95	54.078	Macaca_nemestrina
ENSPMAG00000008148	sall1b	99	51.737	ENSMLEG00000036406	SALL1	99	51.601	Mandrillus_leucophaeus
ENSPMAG00000008148	sall1b	98	48.900	ENSMAMG00000004164	sall1a	98	48.378	Mastacembelus_armatus
ENSPMAG00000008148	sall1b	73	54.453	ENSMZEG00005006479	sall1a	99	49.094	Maylandia_zebra
ENSPMAG00000008148	sall1b	98	51.907	ENSMGAG00000004704	SALL1	100	51.685	Meleagris_gallopavo
ENSPMAG00000008148	sall1b	99	50.811	ENSMAUG00000019093	Sall1	99	51.288	Mesocricetus_auratus
ENSPMAG00000008148	sall1b	99	52.062	ENSMICG00000036486	SALL1	99	50.802	Microcebus_murinus
ENSPMAG00000008148	sall1b	96	49.359	ENSMMOG00000016400	sall1a	97	48.492	Mola_mola
ENSPMAG00000008148	sall1b	99	51.964	ENSMODG00000013114	SALL1	99	51.991	Monodelphis_domestica
ENSPMAG00000008148	sall1b	99	51.318	MGP_CAROLIEiJ_G0031362	Sall1	99	50.992	Mus_caroli
ENSPMAG00000008148	sall1b	99	51.387	ENSMUSG00000031665	Sall1	99	51.282	Mus_musculus
ENSPMAG00000008148	sall1b	99	51.314	MGP_SPRETEiJ_G0032480	Sall1	99	51.209	Mus_spretus
ENSPMAG00000008148	sall1b	98	51.331	ENSMPUG00000003265	SALL1	96	50.777	Mustela_putorius_furo
ENSPMAG00000008148	sall1b	96	50.719	ENSMLUG00000015541	SALL1	98	50.976	Myotis_lucifugus
ENSPMAG00000008148	sall1b	73	54.555	ENSNBRG00000009307	sall1a	99	49.368	Neolamprologus_brichardi
ENSPMAG00000008148	sall1b	88	70.000	ENSNLEG00000001008	SALL1	99	70.000	Nomascus_leucogenys
ENSPMAG00000008148	sall1b	99	52.039	ENSMEUG00000012206	SALL1	99	51.917	Notamacropus_eugenii
ENSPMAG00000008148	sall1b	62	63.462	ENSOPRG00000005645	SALL1	69	63.462	Ochotona_princeps
ENSPMAG00000008148	sall1b	99	52.027	ENSODEG00000003685	SALL1	99	51.871	Octodon_degus
ENSPMAG00000008148	sall1b	73	54.555	ENSONIG00000002831	sall1a	96	63.462	Oreochromis_niloticus
ENSPMAG00000008148	sall1b	77	65.385	ENSOANG00000013399	SALL1	95	65.385	Ornithorhynchus_anatinus
ENSPMAG00000008148	sall1b	97	49.286	ENSORLG00015018830	sall1a	96	50.577	Oryzias_latipes_hsok
ENSPMAG00000008148	sall1b	99	51.722	ENSOGAG00000027316	SALL1	99	51.090	Otolemur_garnettii
ENSPMAG00000008148	sall1b	96	38.526	ENSPPAG00000035136	-	97	38.880	Pan_paniscus
ENSPMAG00000008148	sall1b	96	52.108	ENSPPAG00000035657	SALL1	98	51.819	Pan_paniscus
ENSPMAG00000008148	sall1b	99	50.699	ENSPPRG00000023283	SALL1	99	51.136	Panthera_pardus
ENSPMAG00000008148	sall1b	71	73.684	ENSPTIG00000013539	-	94	65.957	Panthera_tigris_altaica
ENSPMAG00000008148	sall1b	99	51.399	ENSPTRG00000008108	SALL1	99	51.126	Pan_troglodytes
ENSPMAG00000008148	sall1b	94	38.806	ENSPTRG00000045256	-	94	39.223	Pan_troglodytes
ENSPMAG00000008148	sall1b	99	51.737	ENSPANG00000024176	SALL1	99	51.601	Papio_anubis
ENSPMAG00000008148	sall1b	97	47.900	ENSPKIG00000005383	-	52	54.880	Paramormyrops_kingsleyae
ENSPMAG00000008148	sall1b	97	48.419	ENSPKIG00000022251	sall1a	97	47.997	Paramormyrops_kingsleyae
ENSPMAG00000008148	sall1b	99	50.957	ENSPSIG00000008582	SALL1	99	50.806	Pelodiscus_sinensis
ENSPMAG00000008148	sall1b	96	49.098	ENSPMGG00000021788	sall1a	95	49.244	Periophthalmus_magnuspinnatus
ENSPMAG00000008148	sall1b	99	52.122	ENSPCIG00000017840	SALL1	99	51.844	Phascolarctos_cinereus
ENSPMAG00000008148	sall1b	97	48.368	ENSPFOG00000015799	sall1a	95	47.952	Poecilia_formosa
ENSPMAG00000008148	sall1b	97	48.478	ENSPLAG00000022539	sall1a	97	47.842	Poecilia_latipinna
ENSPMAG00000008148	sall1b	98	47.921	ENSPMEG00000020894	sall1a	99	47.403	Poecilia_mexicana
ENSPMAG00000008148	sall1b	97	48.474	ENSPREG00000006802	sall1a	99	47.430	Poecilia_reticulata
ENSPMAG00000008148	sall1b	89	65.385	ENSPPYG00000007345	SALL1	94	65.385	Pongo_abelii
ENSPMAG00000008148	sall1b	85	54.098	ENSPCAG00000008162	SALL1	92	63.462	Procavia_capensis
ENSPMAG00000008148	sall1b	99	51.584	ENSPCOG00000028192	SALL1	99	50.620	Propithecus_coquereli
ENSPMAG00000008148	sall1b	67	63.462	ENSPVAG00000015374	SALL1	99	63.462	Pteropus_vampyrus
ENSPMAG00000008148	sall1b	73	54.352	ENSPNYG00000010865	sall1a	99	48.968	Pundamilia_nyererei
ENSPMAG00000008148	sall1b	71	45.729	ENSPNAG00000007442	sall1b	90	63.462	Pygocentrus_nattereri
ENSPMAG00000008148	sall1b	98	65.385	ENSPNAG00000028248	-	65	71.875	Pygocentrus_nattereri
ENSPMAG00000008148	sall1b	97	47.506	ENSPNAG00000023644	sall1a	52	56.503	Pygocentrus_nattereri
ENSPMAG00000008148	sall1b	88	54.706	ENSRBIG00000015707	SALL1	95	53.915	Rhinopithecus_bieti
ENSPMAG00000008148	sall1b	96	52.118	ENSRROG00000035777	SALL1	98	51.935	Rhinopithecus_roxellana
ENSPMAG00000008148	sall1b	99	51.205	ENSSBOG00000032186	SALL1	99	51.012	Saimiri_boliviensis_boliviensis
ENSPMAG00000008148	sall1b	97	48.501	ENSSFOG00015001590	sall1a	51	57.329	Scleropages_formosus
ENSPMAG00000008148	sall1b	96	49.509	ENSSMAG00000009160	sall1a	97	48.901	Scophthalmus_maximus
ENSPMAG00000008148	sall1b	77	61.224	ENSSDUG00000000748	sall1b	50	63.830	Seriola_dumerili
ENSPMAG00000008148	sall1b	96	49.436	ENSSDUG00000006507	sall1a	99	49.722	Seriola_dumerili
ENSPMAG00000008148	sall1b	96	49.436	ENSSLDG00000017721	sall1a	97	49.058	Seriola_lalandi_dorsalis
ENSPMAG00000008148	sall1b	96	52.767	ENSSARG00000000661	SALL1	98	52.197	Sorex_araneus
ENSPMAG00000008148	sall1b	99	50.956	ENSSPUG00000000156	SALL1	99	50.844	Sphenodon_punctatus
ENSPMAG00000008148	sall1b	88	54.782	ENSSSCG00000002836	SALL1	96	54.098	Sus_scrofa
ENSPMAG00000008148	sall1b	99	51.515	ENSTGUG00000007514	SALL1	99	51.185	Taeniopygia_guttata
ENSPMAG00000008148	sall1b	87	53.846	ENSTRUG00000008950	sall1a	89	56.140	Takifugu_rubripes
ENSPMAG00000008148	sall1b	89	45.833	ENSTNIG00000004257	sall1a	96	47.494	Tetraodon_nigroviridis
ENSPMAG00000008148	sall1b	73	58.741	ENSTBEG00000002119	-	52	58.621	Tupaia_belangeri
ENSPMAG00000008148	sall1b	89	65.385	ENSUAMG00000023379	-	91	65.385	Ursus_americanus
ENSPMAG00000008148	sall1b	84	65.385	ENSVVUG00000019383	-	98	65.385	Vulpes_vulpes
ENSPMAG00000008148	sall1b	69	61.538	ENSXETG00000017176	sall2	54	61.538	Xenopus_tropicalis
ENSPMAG00000008148	sall1b	98	47.874	ENSXMAG00000016273	sall1a	99	48.617	Xiphophorus_maculatus