EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000008153 (Gene tree)
Gene ID: -
Gene Symbol: plod2
Alias: -
Full Name: procollagen-lysine%2C 2-oxoglutarate 5-dioxygenase 2
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Plus strand
Length: 8943 bases
Position: chrGL481649:366-9308
Accession: ZDB-GENE-070326-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000008975	2OG-FeII_Oxy	PF03171.20	3.6e-07	1	1
ENSPMAP00000008974	2OG-FeII_Oxy	PF03171.20	7.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000009013	-	1609	-	ENSPMAP00000008974	386 (aa)	-	S4RUT4
ENSPMAT00000009014	-	1192	-	ENSPMAP00000008975	247 (aa)	-	S4RUT5

Gene Model

Click here to download ENSPMAG00000008153's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000008153's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000008153	plod2	97	67.500	ENSG00000106397	PLOD3	97	75.000	Homo_sapiens
ENSPMAG00000008153	plod2	100	67.611	ENSG00000152952	PLOD2	92	66.321	Homo_sapiens
ENSPMAG00000008153	plod2	97	71.667	ENSAPOG00000013081	plod1a	50	61.097	Acanthochromis_polyacanthus
ENSPMAG00000008153	plod2	97	70.124	ENSAPOG00000013652	plod3	50	62.694	Acanthochromis_polyacanthus
ENSPMAG00000008153	plod2	98	69.421	ENSAMEG00000013650	PLOD2	50	66.319	Ailuropoda_melanoleuca
ENSPMAG00000008153	plod2	100	67.611	ENSACIG00000018677	plod2	52	63.969	Amphilophus_citrinellus
ENSPMAG00000008153	plod2	97	70.417	ENSAOCG00000018734	plod1a	55	63.185	Amphiprion_ocellaris
ENSPMAG00000008153	plod2	97	69.295	ENSAOCG00000009132	plod3	50	61.658	Amphiprion_ocellaris
ENSPMAG00000008153	plod2	97	70.417	ENSAPEG00000006235	plod1a	52	62.924	Amphiprion_percula
ENSPMAG00000008153	plod2	97	69.295	ENSAPEG00000020103	plod3	52	61.658	Amphiprion_percula
ENSPMAG00000008153	plod2	98	71.901	ENSAPLG00000011127	PLOD2	52	67.885	Anas_platyrhynchos
ENSPMAG00000008153	plod2	98	69.421	ENSACAG00000006657	PLOD2	50	64.230	Anolis_carolinensis
ENSPMAG00000008153	plod2	100	67.611	ENSANAG00000030377	PLOD2	50	66.580	Aotus_nancymaae
ENSPMAG00000008153	plod2	97	67.083	ENSANAG00000026221	PLOD1	51	61.097	Aotus_nancymaae
ENSPMAG00000008153	plod2	98	71.901	ENSACLG00000027422	plod2	50	67.363	Astatotilapia_calliptera
ENSPMAG00000008153	plod2	97	67.500	ENSBTAG00000002052	PLOD1	50	61.097	Bos_taurus
ENSPMAG00000008153	plod2	100	67.206	ENSBTAG00000007331	PLOD2	54	65.796	Bos_taurus
ENSPMAG00000008153	plod2	100	67.206	ENSCJAG00000001578	PLOD2	55	65.013	Callithrix_jacchus
ENSPMAG00000008153	plod2	98	69.421	ENSCAFG00000008101	PLOD2	50	66.319	Canis_familiaris
ENSPMAG00000008153	plod2	100	67.611	ENSCAFG00020011739	PLOD2	52	66.319	Canis_lupus_dingo
ENSPMAG00000008153	plod2	100	67.206	ENSCHIG00000018266	PLOD2	50	65.796	Capra_hircus
ENSPMAG00000008153	plod2	97	67.500	ENSCHIG00000025580	PLOD1	50	61.097	Capra_hircus
ENSPMAG00000008153	plod2	97	66.250	ENSTSYG00000035536	PLOD1	54	60.052	Carlito_syrichta
ENSPMAG00000008153	plod2	100	66.802	ENSTSYG00000007171	PLOD2	56	64.491	Carlito_syrichta
ENSPMAG00000008153	plod2	97	68.201	ENSCAPG00000010686	PLOD2	53	61.458	Cavia_aperea
ENSPMAG00000008153	plod2	98	68.182	ENSCPOG00000014514	PLOD2	51	62.141	Cavia_porcellus
ENSPMAG00000008153	plod2	100	67.611	ENSCCAG00000025733	PLOD2	50	66.580	Cebus_capucinus
ENSPMAG00000008153	plod2	100	67.611	ENSCATG00000041420	PLOD2	51	66.580	Cercocebus_atys
ENSPMAG00000008153	plod2	96	60.504	ENSCATG00000017580	PLOD1	50	56.919	Cercocebus_atys
ENSPMAG00000008153	plod2	100	67.206	ENSCLAG00000008696	PLOD2	50	66.319	Chinchilla_lanigera
ENSPMAG00000008153	plod2	98	69.421	ENSCSAG00000011365	PLOD2	50	66.580	Chlorocebus_sabaeus
ENSPMAG00000008153	plod2	100	67.611	ENSCANG00000032726	PLOD2	50	66.580	Colobus_angolensis_palliatus
ENSPMAG00000008153	plod2	97	66.250	ENSCANG00000000277	PLOD1	50	60.836	Colobus_angolensis_palliatus
ENSPMAG00000008153	plod2	97	66.667	ENSCGRG00001017088	Plod3	51	62.760	Cricetulus_griseus_chok1gshd
ENSPMAG00000008153	plod2	100	67.611	ENSCGRG00001022906	Plod2	50	66.319	Cricetulus_griseus_chok1gshd
ENSPMAG00000008153	plod2	97	66.667	ENSCGRG00000009240	Plod3	55	62.760	Cricetulus_griseus_crigri
ENSPMAG00000008153	plod2	100	67.611	ENSCGRG00000001261	Plod2	51	66.319	Cricetulus_griseus_crigri
ENSPMAG00000008153	plod2	97	69.710	ENSCVAG00000015237	plod3	57	62.176	Cyprinodon_variegatus
ENSPMAG00000008153	plod2	97	68.333	ENSDARG00000011821	plod2	50	64.230	Danio_rerio
ENSPMAG00000008153	plod2	97	70.954	ENSDARG00000076317	plod3	50	61.399	Danio_rerio
ENSPMAG00000008153	plod2	99	59.585	ENSDNOG00000005149	PLOD2	50	59.530	Dasypus_novemcinctus
ENSPMAG00000008153	plod2	96	56.017	ENSDORG00000008737	Plod1	51	52.041	Dipodomys_ordii
ENSPMAG00000008153	plod2	100	67.611	ENSDORG00000003217	Plod2	53	66.580	Dipodomys_ordii
ENSPMAG00000008153	plod2	100	68.016	ENSEASG00005000164	PLOD2	50	66.580	Equus_asinus_asinus
ENSPMAG00000008153	plod2	97	67.083	ENSEASG00005016643	PLOD1	55	60.313	Equus_asinus_asinus
ENSPMAG00000008153	plod2	100	68.016	ENSECAG00000009297	PLOD2	50	66.580	Equus_caballus
ENSPMAG00000008153	plod2	98	69.008	ENSEEUG00000015012	PLOD2	50	55.875	Erinaceus_europaeus
ENSPMAG00000008153	plod2	100	67.611	ENSFCAG00000023549	PLOD2	50	66.319	Felis_catus
ENSPMAG00000008153	plod2	96	66.387	ENSFDAG00000013861	PLOD1	51	59.269	Fukomys_damarensis
ENSPMAG00000008153	plod2	98	68.595	ENSFDAG00000011434	PLOD2	57	65.796	Fukomys_damarensis
ENSPMAG00000008153	plod2	97	67.917	ENSFHEG00000021014	plod1a	55	60.836	Fundulus_heteroclitus
ENSPMAG00000008153	plod2	100	68.421	ENSGMOG00000003290	plod1a	51	62.924	Gadus_morhua
ENSPMAG00000008153	plod2	100	70.445	ENSGALG00000006783	PLOD2	54	67.363	Gallus_gallus
ENSPMAG00000008153	plod2	97	68.465	ENSGAFG00000020388	plod3	99	60.881	Gambusia_affinis
ENSPMAG00000008153	plod2	97	66.667	ENSGGOG00000013645	PLOD1	50	61.097	Gorilla_gorilla
ENSPMAG00000008153	plod2	100	67.611	ENSGGOG00000014284	PLOD2	50	66.580	Gorilla_gorilla
ENSPMAG00000008153	plod2	97	65.145	ENSHBUG00000020042	plod1a	53	60.156	Haplochromis_burtoni
ENSPMAG00000008153	plod2	100	70.040	ENSHBUG00000015944	plod2	56	66.057	Haplochromis_burtoni
ENSPMAG00000008153	plod2	100	67.611	ENSHGLG00000019219	PLOD2	50	66.580	Heterocephalus_glaber_female
ENSPMAG00000008153	plod2	100	67.611	ENSHGLG00100003295	PLOD2	50	66.580	Heterocephalus_glaber_male
ENSPMAG00000008153	plod2	97	70.417	ENSIPUG00000001033	plod2	51	65.535	Ictalurus_punctatus
ENSPMAG00000008153	plod2	100	67.611	ENSSTOG00000025550	PLOD2	50	66.319	Ictidomys_tridecemlineatus
ENSPMAG00000008153	plod2	100	66.802	ENSJJAG00000013305	Plod2	53	66.057	Jaculus_jaculus
ENSPMAG00000008153	plod2	97	70.000	ENSLBEG00000015540	plod1a	51	62.500	Labrus_bergylta
ENSPMAG00000008153	plod2	100	67.611	ENSLAFG00000001931	PLOD2	51	64.752	Loxodonta_africana
ENSPMAG00000008153	plod2	100	67.611	ENSMFAG00000038516	PLOD2	54	66.580	Macaca_fascicularis
ENSPMAG00000008153	plod2	97	67.500	ENSMFAG00000033241	PLOD3	51	63.185	Macaca_fascicularis
ENSPMAG00000008153	plod2	97	65.833	ENSMFAG00000037610	PLOD1	50	60.574	Macaca_fascicularis
ENSPMAG00000008153	plod2	98	69.421	ENSMMUG00000011577	PLOD2	54	66.580	Macaca_mulatta
ENSPMAG00000008153	plod2	97	67.500	ENSMNEG00000036923	PLOD3	50	63.185	Macaca_nemestrina
ENSPMAG00000008153	plod2	100	67.611	ENSMNEG00000029275	PLOD2	54	66.580	Macaca_nemestrina
ENSPMAG00000008153	plod2	97	67.500	ENSMLEG00000036735	PLOD3	50	63.021	Mandrillus_leucophaeus
ENSPMAG00000008153	plod2	100	67.611	ENSMLEG00000032487	PLOD2	50	66.319	Mandrillus_leucophaeus
ENSPMAG00000008153	plod2	100	70.040	ENSMZEG00005017645	plod2	50	67.363	Maylandia_zebra
ENSPMAG00000008153	plod2	91	68.142	ENSMZEG00005019823	plod2	99	57.031	Maylandia_zebra
ENSPMAG00000008153	plod2	100	67.206	ENSMAUG00000003215	Plod2	50	66.319	Mesocricetus_auratus
ENSPMAG00000008153	plod2	97	66.667	ENSMICG00000005429	-	99	55.523	Microcebus_murinus
ENSPMAG00000008153	plod2	98	69.008	ENSMICG00000049252	PLOD2	50	66.319	Microcebus_murinus
ENSPMAG00000008153	plod2	100	65.992	ENSMOCG00000014848	Plod2	50	65.535	Microtus_ochrogaster
ENSPMAG00000008153	plod2	98	68.880	ENSMMOG00000013171	plod1a	51	61.880	Mola_mola
ENSPMAG00000008153	plod2	98	65.560	ENSMODG00000005017	PLOD3	52	61.198	Monodelphis_domestica
ENSPMAG00000008153	plod2	97	69.583	ENSMALG00000016161	plod1a	51	62.663	Monopterus_albus
ENSPMAG00000008153	plod2	100	67.611	ENSMUSG00000032374	Plod2	50	66.580	Mus_musculus
ENSPMAG00000008153	plod2	100	68.016	MGP_PahariEiJ_G0015394	Plod2	50	67.102	Mus_pahari
ENSPMAG00000008153	plod2	100	67.611	MGP_SPRETEiJ_G0033668	Plod2	50	66.841	Mus_spretus
ENSPMAG00000008153	plod2	97	67.500	ENSMPUG00000015891	PLOD3	52	62.760	Mustela_putorius_furo
ENSPMAG00000008153	plod2	98	69.421	ENSMPUG00000011826	PLOD2	50	66.319	Mustela_putorius_furo
ENSPMAG00000008153	plod2	97	69.874	ENSMLUG00000023471	-	100	64.387	Myotis_lucifugus
ENSPMAG00000008153	plod2	96	67.227	ENSNGAG00000008701	-	98	60.313	Nannospalax_galili
ENSPMAG00000008153	plod2	100	68.016	ENSNGAG00000000687	Plod2	52	65.013	Nannospalax_galili
ENSPMAG00000008153	plod2	100	69.231	ENSNBRG00000017408	plod2	51	65.535	Neolamprologus_brichardi
ENSPMAG00000008153	plod2	100	67.611	ENSNLEG00000005034	PLOD2	50	66.580	Nomascus_leucogenys
ENSPMAG00000008153	plod2	97	67.917	ENSMEUG00000008093	PLOD1	51	61.880	Notamacropus_eugenii
ENSPMAG00000008153	plod2	99	43.782	ENSOPRG00000006945	PLOD2	50	43.603	Ochotona_princeps
ENSPMAG00000008153	plod2	96	64.706	ENSOPRG00000006783	PLOD1	51	59.530	Ochotona_princeps
ENSPMAG00000008153	plod2	100	68.016	ENSODEG00000009443	PLOD2	50	66.057	Octodon_degus
ENSPMAG00000008153	plod2	98	69.835	ENSONIG00000005883	plod2	50	65.796	Oreochromis_niloticus
ENSPMAG00000008153	plod2	72	71.910	ENSOANG00000012852	-	100	72.316	Ornithorhynchus_anatinus
ENSPMAG00000008153	plod2	97	67.500	ENSOANG00000004585	-	84	61.358	Ornithorhynchus_anatinus
ENSPMAG00000008153	plod2	97	67.083	ENSOCUG00000021812	PLOD3	51	59.062	Oryctolagus_cuniculus
ENSPMAG00000008153	plod2	98	68.182	ENSOCUG00000001461	PLOD2	50	66.057	Oryctolagus_cuniculus
ENSPMAG00000008153	plod2	97	70.124	ENSORLG00000029631	plod3	99	62.176	Oryzias_latipes
ENSPMAG00000008153	plod2	97	70.124	ENSORLG00015001924	plod3	99	59.375	Oryzias_latipes_hsok
ENSPMAG00000008153	plod2	97	69.710	ENSOMEG00000006893	plod3	50	61.917	Oryzias_melastigma
ENSPMAG00000008153	plod2	98	70.661	ENSOGAG00000009905	PLOD2	52	59.791	Otolemur_garnettii
ENSPMAG00000008153	plod2	97	67.500	ENSOARG00000017960	PLOD1	51	61.097	Ovis_aries
ENSPMAG00000008153	plod2	97	67.083	ENSPPAG00000034724	PLOD1	50	61.097	Pan_paniscus
ENSPMAG00000008153	plod2	100	67.611	ENSPPAG00000039540	PLOD2	50	66.580	Pan_paniscus
ENSPMAG00000008153	plod2	100	67.611	ENSPPRG00000012277	PLOD2	50	66.319	Panthera_pardus
ENSPMAG00000008153	plod2	100	67.611	ENSPTIG00000018891	PLOD2	54	66.319	Panthera_tigris_altaica
ENSPMAG00000008153	plod2	100	67.611	ENSPTRG00000015494	PLOD2	50	66.580	Pan_troglodytes
ENSPMAG00000008153	plod2	97	67.083	ENSPTRG00000000158	PLOD1	50	61.358	Pan_troglodytes
ENSPMAG00000008153	plod2	100	67.611	ENSPANG00000020900	PLOD2	54	66.580	Papio_anubis
ENSPMAG00000008153	plod2	97	67.500	ENSPANG00000021830	PLOD3	51	63.185	Papio_anubis
ENSPMAG00000008153	plod2	98	69.835	ENSPKIG00000009566	plod2	55	65.195	Paramormyrops_kingsleyae
ENSPMAG00000008153	plod2	98	68.595	ENSPEMG00000023460	Plod2	53	65.535	Peromyscus_maniculatus_bairdii
ENSPMAG00000008153	plod2	100	69.231	ENSPCIG00000018522	PLOD2	50	67.363	Phascolarctos_cinereus
ENSPMAG00000008153	plod2	98	68.880	ENSPLAG00000018953	plod1a	55	61.880	Poecilia_latipinna
ENSPMAG00000008153	plod2	97	70.124	ENSPLAG00000004494	plod3	50	61.917	Poecilia_latipinna
ENSPMAG00000008153	plod2	97	70.124	ENSPMEG00000001542	plod3	50	62.176	Poecilia_mexicana
ENSPMAG00000008153	plod2	98	69.421	ENSPPYG00000029800	-	99	66.580	Pongo_abelii
ENSPMAG00000008153	plod2	97	67.083	ENSPVAG00000001241	PLOD3	52	62.760	Pteropus_vampyrus
ENSPMAG00000008153	plod2	100	70.040	ENSPNYG00000006024	plod2	52	66.057	Pundamilia_nyererei
ENSPMAG00000008153	plod2	97	65.145	ENSPNYG00000000578	plod1a	50	60.156	Pundamilia_nyererei
ENSPMAG00000008153	plod2	97	70.539	ENSPNAG00000021984	plod3	50	62.694	Pygocentrus_nattereri
ENSPMAG00000008153	plod2	100	68.016	ENSRNOG00000030183	Plod2	50	67.102	Rattus_norvegicus
ENSPMAG00000008153	plod2	100	67.611	ENSRBIG00000042963	PLOD2	57	66.580	Rhinopithecus_bieti
ENSPMAG00000008153	plod2	98	69.421	ENSRROG00000031649	PLOD2	50	66.580	Rhinopithecus_roxellana
ENSPMAG00000008153	plod2	100	67.611	ENSSBOG00000030460	PLOD2	58	65.274	Saimiri_boliviensis_boliviensis
ENSPMAG00000008153	plod2	97	68.333	ENSSBOG00000020136	PLOD3	50	63.281	Saimiri_boliviensis_boliviensis
ENSPMAG00000008153	plod2	100	68.826	ENSSHAG00000017470	PLOD2	51	67.363	Sarcophilus_harrisii
ENSPMAG00000008153	plod2	100	70.850	ENSSFOG00015014512	plod2	50	66.927	Scleropages_formosus
ENSPMAG00000008153	plod2	97	68.750	ENSSFOG00015010374	plod1a	55	63.021	Scleropages_formosus
ENSPMAG00000008153	plod2	97	69.583	ENSSMAG00000011129	plod1a	50	61.440	Scophthalmus_maximus
ENSPMAG00000008153	plod2	97	68.880	ENSSDUG00000002200	plod3	50	61.140	Seriola_dumerili
ENSPMAG00000008153	plod2	98	56.612	ENSSLDG00000007569	plod3	62	52.258	Seriola_lalandi_dorsalis
ENSPMAG00000008153	plod2	98	69.008	ENSSARG00000003690	PLOD2	55	56.658	Sorex_araneus
ENSPMAG00000008153	plod2	97	67.083	ENSSSCG00000003433	PLOD1	50	60.836	Sus_scrofa
ENSPMAG00000008153	plod2	100	67.611	ENSSSCG00000011689	PLOD2	57	66.057	Sus_scrofa
ENSPMAG00000008153	plod2	100	70.040	ENSTGUG00000008767	PLOD2	51	66.057	Taeniopygia_guttata
ENSPMAG00000008153	plod2	98	69.710	ENSTRUG00000008466	plod1	51	62.924	Takifugu_rubripes
ENSPMAG00000008153	plod2	97	67.500	ENSTBEG00000014615	PLOD3	71	62.500	Tupaia_belangeri
ENSPMAG00000008153	plod2	99	59.067	ENSTBEG00000015790	PLOD2	53	59.008	Tupaia_belangeri
ENSPMAG00000008153	plod2	100	67.611	ENSUAMG00000020858	PLOD2	53	66.319	Ursus_americanus
ENSPMAG00000008153	plod2	98	66.667	ENSUAMG00000013690	PLOD3	53	62.051	Ursus_americanus
ENSPMAG00000008153	plod2	97	66.667	ENSUMAG00000022265	PLOD1	50	60.574	Ursus_maritimus
ENSPMAG00000008153	plod2	98	69.421	ENSUMAG00000012593	PLOD2	54	66.406	Ursus_maritimus
ENSPMAG00000008153	plod2	100	67.611	ENSVVUG00000008510	PLOD2	52	66.319	Vulpes_vulpes
ENSPMAG00000008153	plod2	98	68.050	ENSXCOG00000002023	plod1a	60	61.619	Xiphophorus_couchianus
ENSPMAG00000008153	plod2	97	68.050	ENSXMAG00000002047	plod3	98	61.680	Xiphophorus_maculatus