EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMAG00000008166 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Plus strand
Length: 14815 bases
Position: chrGL480172:2151-16965
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000008992	TUDOR	PF00567.24	2.1e-142	1	6
ENSPMAP00000008992	TUDOR	PF00567.24	2.1e-142	2	6
ENSPMAP00000008992	TUDOR	PF00567.24	2.1e-142	3	6
ENSPMAP00000008992	TUDOR	PF00567.24	2.1e-142	4	6
ENSPMAP00000008992	TUDOR	PF00567.24	2.1e-142	5	6
ENSPMAP00000008992	TUDOR	PF00567.24	2.1e-142	6	6

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000009031	-	4878	-	ENSPMAP00000008992	1626 (aa)	-	S4RUV2

Gene Model

Click here to download ENSPMAG00000008166's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000008166's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMAG00000008166	-	75	30.499	ENSPMAG00000004416	-	91	30.028

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000008166	-	98	34.911	ENSAPOG00000020893	-	90	36.154	Acanthochromis_polyacanthus
ENSPMAG00000008166	-	99	30.159	ENSAOCG00000017073	-	95	32.117	Amphiprion_ocellaris
ENSPMAG00000008166	-	88	33.621	ENSCSEG00000003495	-	88	33.621	Cynoglossus_semilaevis
ENSPMAG00000008166	-	97	30.601	ENSDARG00000089954	si:ch211-189e2.3	86	30.601	Danio_rerio
ENSPMAG00000008166	-	86	32.031	ENSGALG00000044279	-	56	32.031	Gallus_gallus
ENSPMAG00000008166	-	97	34.483	ENSKMAG00000015790	-	89	36.641	Kryptolebias_marmoratus
ENSPMAG00000008166	-	87	30.496	ENSMGAG00000014281	-	69	33.594	Meleagris_gallopavo
ENSPMAG00000008166	-	90	30.526	ENSNBRG00000018258	tdrd6	80	31.398	Neolamprologus_brichardi
ENSPMAG00000008166	-	97	34.737	ENSORLG00000015951	amh	70	34.737	Oryzias_latipes
ENSPMAG00000008166	-	95	35.263	ENSORLG00020005897	amh	69	35.263	Oryzias_latipes_hni
ENSPMAG00000008166	-	97	35.263	ENSORLG00015001382	amh	70	35.263	Oryzias_latipes_hsok
ENSPMAG00000008166	-	99	32.843	ENSOMEG00000014481	tdrd6	70	34.000	Oryzias_melastigma
ENSPMAG00000008166	-	89	31.421	ENSPNYG00000021847	tdrd6	79	34.615	Pundamilia_nyererei
ENSPMAG00000008166	-	94	31.073	ENSTGUG00000013234	TDRD6	84	31.073	Taeniopygia_guttata
ENSPMAG00000008166	-	88	38.614	ENSTRUG00000006534	-	85	38.614	Takifugu_rubripes
ENSPMAG00000008166	-	82	33.775	ENSTNIG00000019317	-	86	36.296	Tetraodon_nigroviridis
ENSPMAG00000008166	-	91	33.758	ENSUMAG00000005127	TDRD6	70	33.758	Ursus_maritimus
ENSPMAG00000008166	-	88	30.769	ENSVVUG00000029302	TDRD6	61	30.769	Vulpes_vulpes
ENSPMAG00000008166	-	96	30.370	ENSXETG00000016255	tdrd6	93	30.370	Xenopus_tropicalis
ENSPMAG00000008166	-	87	40.000	ENSXCOG00000008476	tdrd6	86	40.000	Xiphophorus_couchianus