EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000008183 (Gene tree)
Gene ID: -
Gene Symbol: rpusd4
Alias: -
Full Name: RNA pseudouridine synthase D4
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Plus strand
Length: 4077 bases
Position: chrGL484265:15078-19154
Accession: ZDB-GENE-040801-238
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000009006	PseudoU_synth_2	PF00849.22	2e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000009045	-	1183	-	ENSPMAP00000009006	346 (aa)	-	S4RUW6

Gene Model

Click here to download ENSPMAG00000008183's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000008183's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000008183	rpusd4	98	44.543	ENSG00000165526	RPUSD4	81	44.868	Homo_sapiens
ENSPMAG00000008183	rpusd4	96	40.181	ENSAPOG00000011024	rpusd4	76	40.181	Acanthochromis_polyacanthus
ENSPMAG00000008183	rpusd4	72	44.954	ENSAMEG00000005953	-	95	44.954	Ailuropoda_melanoleuca
ENSPMAG00000008183	rpusd4	97	46.567	ENSAMEG00000000127	-	80	46.567	Ailuropoda_melanoleuca
ENSPMAG00000008183	rpusd4	98	38.643	ENSACIG00000003533	rpusd4	91	38.643	Amphilophus_citrinellus
ENSPMAG00000008183	rpusd4	95	40.303	ENSAOCG00000015409	rpusd4	75	40.303	Amphiprion_ocellaris
ENSPMAG00000008183	rpusd4	95	40.000	ENSAPEG00000018935	rpusd4	75	40.000	Amphiprion_percula
ENSPMAG00000008183	rpusd4	99	40.936	ENSATEG00000008059	rpusd4	78	40.936	Anabas_testudineus
ENSPMAG00000008183	rpusd4	90	42.903	ENSAPLG00000013250	RPUSD4	99	42.331	Anas_platyrhynchos
ENSPMAG00000008183	rpusd4	97	43.155	ENSACAG00000000189	RPUSD4	83	43.155	Anolis_carolinensis
ENSPMAG00000008183	rpusd4	98	44.543	ENSANAG00000024050	RPUSD4	82	44.543	Aotus_nancymaae
ENSPMAG00000008183	rpusd4	98	40.533	ENSACLG00000020996	rpusd4	79	40.533	Astatotilapia_calliptera
ENSPMAG00000008183	rpusd4	96	41.994	ENSAMXG00000031479	rpusd4	85	41.994	Astyanax_mexicanus
ENSPMAG00000008183	rpusd4	96	45.317	ENSBTAG00000020900	RPUSD4	79	45.921	Bos_taurus
ENSPMAG00000008183	rpusd4	98	45.428	ENSCJAG00000042850	RPUSD4	77	45.428	Callithrix_jacchus
ENSPMAG00000008183	rpusd4	97	44.776	ENSCAFG00000010488	RPUSD4	80	44.910	Canis_familiaris
ENSPMAG00000008183	rpusd4	97	44.776	ENSCAFG00020010621	RPUSD4	80	44.910	Canis_lupus_dingo
ENSPMAG00000008183	rpusd4	96	45.015	ENSCHIG00000009975	RPUSD4	79	45.619	Capra_hircus
ENSPMAG00000008183	rpusd4	98	43.363	ENSTSYG00000008456	RPUSD4	82	43.363	Carlito_syrichta
ENSPMAG00000008183	rpusd4	81	42.294	ENSCAPG00000006040	RPUSD4	95	42.294	Cavia_aperea
ENSPMAG00000008183	rpusd4	98	44.838	ENSCPOG00000014971	RPUSD4	82	44.838	Cavia_porcellus
ENSPMAG00000008183	rpusd4	98	44.543	ENSCCAG00000027838	RPUSD4	82	44.543	Cebus_capucinus
ENSPMAG00000008183	rpusd4	98	44.248	ENSCATG00000041570	RPUSD4	81	44.248	Cercocebus_atys
ENSPMAG00000008183	rpusd4	97	46.866	ENSCLAG00000016553	RPUSD4	80	46.866	Chinchilla_lanigera
ENSPMAG00000008183	rpusd4	98	44.248	ENSCSAG00000002274	RPUSD4	81	44.248	Chlorocebus_sabaeus
ENSPMAG00000008183	rpusd4	88	42.105	ENSCHOG00000010249	RPUSD4	96	43.750	Choloepus_hoffmanni
ENSPMAG00000008183	rpusd4	92	42.902	ENSCPBG00000011175	RPUSD4	99	42.902	Chrysemys_picta_bellii
ENSPMAG00000008183	rpusd4	87	36.039	ENSCSAVG00000000872	-	54	36.039	Ciona_savignyi
ENSPMAG00000008183	rpusd4	98	44.379	ENSCANG00000039684	RPUSD4	81	44.379	Colobus_angolensis_palliatus
ENSPMAG00000008183	rpusd4	97	44.510	ENSCGRG00001024141	Rpusd4	81	44.510	Cricetulus_griseus_chok1gshd
ENSPMAG00000008183	rpusd4	97	44.510	ENSCGRG00000014415	Rpusd4	81	44.510	Cricetulus_griseus_crigri
ENSPMAG00000008183	rpusd4	99	40.351	ENSCVAG00000000392	rpusd4	89	40.351	Cyprinodon_variegatus
ENSPMAG00000008183	rpusd4	99	39.766	ENSCVAG00000008761	rpusd4	80	39.766	Cyprinodon_variegatus
ENSPMAG00000008183	rpusd4	97	42.814	ENSDARG00000012674	rpusd4	86	42.308	Danio_rerio
ENSPMAG00000008183	rpusd4	98	45.882	ENSDNOG00000020026	RPUSD4	82	45.882	Dasypus_novemcinctus
ENSPMAG00000008183	rpusd4	97	43.881	ENSDORG00000016717	Rpusd4	80	45.373	Dipodomys_ordii
ENSPMAG00000008183	rpusd4	99	42.398	ENSETEG00000013953	RPUSD4	83	43.567	Echinops_telfairi
ENSPMAG00000008183	rpusd4	97	45.808	ENSEASG00005022982	RPUSD4	80	45.808	Equus_asinus_asinus
ENSPMAG00000008183	rpusd4	97	46.108	ENSECAG00000000557	RPUSD4	80	46.108	Equus_caballus
ENSPMAG00000008183	rpusd4	73	47.458	ENSEEUG00000014036	RPUSD4	63	47.458	Erinaceus_europaeus
ENSPMAG00000008183	rpusd4	99	42.229	ENSELUG00000008075	rpusd4	81	42.229	Esox_lucius
ENSPMAG00000008183	rpusd4	97	43.881	ENSFCAG00000029789	RPUSD4	80	45.373	Felis_catus
ENSPMAG00000008183	rpusd4	96	43.675	ENSFALG00000005171	RPUSD4	88	43.675	Ficedula_albicollis
ENSPMAG00000008183	rpusd4	99	44.898	ENSFDAG00000014307	RPUSD4	83	44.898	Fukomys_damarensis
ENSPMAG00000008183	rpusd4	99	41.813	ENSFHEG00000004329	rpusd4	81	41.813	Fundulus_heteroclitus
ENSPMAG00000008183	rpusd4	95	40.729	ENSGMOG00000017726	rpusd4	89	40.729	Gadus_morhua
ENSPMAG00000008183	rpusd4	90	44.516	ENSGALG00000024326	RPUSD4	84	43.413	Gallus_gallus
ENSPMAG00000008183	rpusd4	97	39.941	ENSGAFG00000021559	rpusd4	79	39.941	Gambusia_affinis
ENSPMAG00000008183	rpusd4	94	40.000	ENSGACG00000001657	rpusd4	97	40.260	Gasterosteus_aculeatus
ENSPMAG00000008183	rpusd4	97	41.791	ENSGAGG00000000132	RPUSD4	84	41.791	Gopherus_agassizii
ENSPMAG00000008183	rpusd4	98	44.543	ENSGGOG00000016494	RPUSD4	81	44.868	Gorilla_gorilla
ENSPMAG00000008183	rpusd4	98	40.533	ENSHBUG00000022838	rpusd4	79	40.533	Haplochromis_burtoni
ENSPMAG00000008183	rpusd4	97	45.994	ENSHGLG00000002285	RPUSD4	81	45.994	Heterocephalus_glaber_female
ENSPMAG00000008183	rpusd4	97	45.994	ENSHGLG00100006385	RPUSD4	81	45.994	Heterocephalus_glaber_male
ENSPMAG00000008183	rpusd4	99	40.816	ENSHCOG00000006612	rpusd4	80	40.816	Hippocampus_comes
ENSPMAG00000008183	rpusd4	96	44.277	ENSIPUG00000023879	rusd4	78	44.277	Ictalurus_punctatus
ENSPMAG00000008183	rpusd4	96	44.444	ENSSTOG00000025280	RPUSD4	83	44.444	Ictidomys_tridecemlineatus
ENSPMAG00000008183	rpusd4	96	46.687	ENSJJAG00000018673	Rpusd4	81	46.687	Jaculus_jaculus
ENSPMAG00000008183	rpusd4	94	42.284	ENSKMAG00000021805	rpusd4	77	42.284	Kryptolebias_marmoratus
ENSPMAG00000008183	rpusd4	97	40.000	ENSLBEG00000020394	rpusd4	87	40.000	Labrus_bergylta
ENSPMAG00000008183	rpusd4	97	41.667	ENSLACG00000011028	RPUSD4	77	41.667	Latimeria_chalumnae
ENSPMAG00000008183	rpusd4	96	35.417	ENSLOCG00000003124	rpusd4	80	35.417	Lepisosteus_oculatus
ENSPMAG00000008183	rpusd4	98	42.604	ENSLAFG00000005211	RPUSD4	100	41.250	Loxodonta_africana
ENSPMAG00000008183	rpusd4	98	44.248	ENSMFAG00000039513	RPUSD4	81	44.248	Macaca_fascicularis
ENSPMAG00000008183	rpusd4	98	44.248	ENSMMUG00000007933	RPUSD4	81	44.248	Macaca_mulatta
ENSPMAG00000008183	rpusd4	98	44.248	ENSMNEG00000027414	RPUSD4	81	44.248	Macaca_nemestrina
ENSPMAG00000008183	rpusd4	98	44.248	ENSMLEG00000042461	RPUSD4	81	44.248	Mandrillus_leucophaeus
ENSPMAG00000008183	rpusd4	96	40.181	ENSMAMG00000023839	rpusd4	78	40.181	Mastacembelus_armatus
ENSPMAG00000008183	rpusd4	98	40.533	ENSMZEG00005011999	rpusd4	79	40.533	Maylandia_zebra
ENSPMAG00000008183	rpusd4	89	44.013	ENSMGAG00000000840	RPUSD4	93	43.284	Meleagris_gallopavo
ENSPMAG00000008183	rpusd4	97	45.373	ENSMAUG00000010280	Rpusd4	80	45.373	Mesocricetus_auratus
ENSPMAG00000008183	rpusd4	97	44.179	ENSMICG00000015979	RPUSD4	92	43.917	Microcebus_murinus
ENSPMAG00000008183	rpusd4	95	44.242	ENSMOCG00000000661	Rpusd4	79	44.242	Microtus_ochrogaster
ENSPMAG00000008183	rpusd4	96	39.577	ENSMMOG00000021731	rpusd4	90	39.577	Mola_mola
ENSPMAG00000008183	rpusd4	93	44.410	ENSMODG00000004521	RPUSD4	74	44.410	Monodelphis_domestica
ENSPMAG00000008183	rpusd4	96	40.181	ENSMALG00000005839	rpusd4	91	40.181	Monopterus_albus
ENSPMAG00000008183	rpusd4	98	45.294	MGP_CAROLIEiJ_G0031954	Rpusd4	81	45.294	Mus_caroli
ENSPMAG00000008183	rpusd4	98	44.706	ENSMUSG00000032044	Rpusd4	81	45.294	Mus_musculus
ENSPMAG00000008183	rpusd4	98	45.000	MGP_PahariEiJ_G0014819	Rpusd4	81	45.000	Mus_pahari
ENSPMAG00000008183	rpusd4	98	45.000	MGP_SPRETEiJ_G0033078	Rpusd4	81	45.000	Mus_spretus
ENSPMAG00000008183	rpusd4	98	45.882	ENSMPUG00000006608	RPUSD4	82	45.882	Mustela_putorius_furo
ENSPMAG00000008183	rpusd4	83	44.599	ENSMLUG00000029348	-	100	44.599	Myotis_lucifugus
ENSPMAG00000008183	rpusd4	97	45.672	ENSMLUG00000017328	-	80	45.672	Myotis_lucifugus
ENSPMAG00000008183	rpusd4	98	45.562	ENSNGAG00000020847	Rpusd4	81	45.562	Nannospalax_galili
ENSPMAG00000008183	rpusd4	98	40.828	ENSNBRG00000005207	rpusd4	90	40.828	Neolamprologus_brichardi
ENSPMAG00000008183	rpusd4	98	44.248	ENSNLEG00000007465	RPUSD4	81	44.248	Nomascus_leucogenys
ENSPMAG00000008183	rpusd4	99	42.857	ENSMEUG00000004370	RPUSD4	84	42.857	Notamacropus_eugenii
ENSPMAG00000008183	rpusd4	97	45.075	ENSODEG00000004577	RPUSD4	80	45.075	Octodon_degus
ENSPMAG00000008183	rpusd4	98	40.533	ENSONIG00000018879	rpusd4	83	40.533	Oreochromis_niloticus
ENSPMAG00000008183	rpusd4	94	42.683	ENSOANG00000007247	RPUSD4	95	42.727	Ornithorhynchus_anatinus
ENSPMAG00000008183	rpusd4	98	42.647	ENSOCUG00000017039	RPUSD4	82	43.824	Oryctolagus_cuniculus
ENSPMAG00000008183	rpusd4	95	40.122	ENSORLG00000002750	rpusd4	83	40.122	Oryzias_latipes
ENSPMAG00000008183	rpusd4	95	40.122	ENSORLG00020002044	rpusd4	75	40.122	Oryzias_latipes_hni
ENSPMAG00000008183	rpusd4	95	39.818	ENSORLG00015020034	rpusd4	75	39.818	Oryzias_latipes_hsok
ENSPMAG00000008183	rpusd4	95	41.033	ENSOMEG00000004861	rpusd4	74	41.033	Oryzias_melastigma
ENSPMAG00000008183	rpusd4	99	44.477	ENSOGAG00000008922	RPUSD4	82	44.477	Otolemur_garnettii
ENSPMAG00000008183	rpusd4	96	45.015	ENSOARG00000012238	RPUSD4	79	45.619	Ovis_aries
ENSPMAG00000008183	rpusd4	98	44.543	ENSPPAG00000042883	RPUSD4	76	44.543	Pan_paniscus
ENSPMAG00000008183	rpusd4	97	43.881	ENSPPRG00000003081	RPUSD4	80	45.373	Panthera_pardus
ENSPMAG00000008183	rpusd4	97	43.881	ENSPTIG00000012059	RPUSD4	87	45.373	Panthera_tigris_altaica
ENSPMAG00000008183	rpusd4	98	44.543	ENSPTRG00000004454	RPUSD4	81	44.543	Pan_troglodytes
ENSPMAG00000008183	rpusd4	98	44.248	ENSPANG00000015040	RPUSD4	81	44.248	Papio_anubis
ENSPMAG00000008183	rpusd4	97	42.899	ENSPKIG00000023986	rpusd4	79	42.899	Paramormyrops_kingsleyae
ENSPMAG00000008183	rpusd4	97	43.155	ENSPSIG00000014268	RPUSD4	97	43.155	Pelodiscus_sinensis
ENSPMAG00000008183	rpusd4	97	36.418	ENSPMGG00000002806	rpusd4	82	37.888	Periophthalmus_magnuspinnatus
ENSPMAG00000008183	rpusd4	98	39.053	ENSPEMG00000000278	Rpusd4	80	39.053	Peromyscus_maniculatus_bairdii
ENSPMAG00000008183	rpusd4	98	43.658	ENSPCIG00000010212	RPUSD4	84	43.658	Phascolarctos_cinereus
ENSPMAG00000008183	rpusd4	97	39.706	ENSPFOG00000019030	rpusd4	81	39.706	Poecilia_formosa
ENSPMAG00000008183	rpusd4	97	39.941	ENSPLAG00000016848	rpusd4	79	39.941	Poecilia_latipinna
ENSPMAG00000008183	rpusd4	97	40.828	ENSPMEG00000017534	rpusd4	79	40.828	Poecilia_mexicana
ENSPMAG00000008183	rpusd4	91	41.195	ENSPREG00000005689	rpusd4	74	41.195	Poecilia_reticulata
ENSPMAG00000008183	rpusd4	98	42.773	ENSPPYG00000004043	RPUSD4	81	44.248	Pongo_abelii
ENSPMAG00000008183	rpusd4	72	54.545	ENSPCAG00000000753	RPUSD4	63	54.545	Procavia_capensis
ENSPMAG00000008183	rpusd4	98	40.000	ENSPCOG00000020694	RPUSD4	81	40.000	Propithecus_coquereli
ENSPMAG00000008183	rpusd4	99	42.982	ENSPVAG00000000988	RPUSD4	83	44.444	Pteropus_vampyrus
ENSPMAG00000008183	rpusd4	98	40.237	ENSPNYG00000009652	rpusd4	79	40.237	Pundamilia_nyererei
ENSPMAG00000008183	rpusd4	97	41.369	ENSPNAG00000012264	rpusd4	81	41.369	Pygocentrus_nattereri
ENSPMAG00000008183	rpusd4	97	45.672	ENSRNOG00000011567	Rpusd4	80	45.672	Rattus_norvegicus
ENSPMAG00000008183	rpusd4	96	45.015	ENSRBIG00000034842	RPUSD4	81	44.248	Rhinopithecus_bieti
ENSPMAG00000008183	rpusd4	96	45.015	ENSRROG00000039753	RPUSD4	81	44.248	Rhinopithecus_roxellana
ENSPMAG00000008183	rpusd4	98	44.543	ENSSBOG00000030413	RPUSD4	82	44.543	Saimiri_boliviensis_boliviensis
ENSPMAG00000008183	rpusd4	97	42.515	ENSSHAG00000008304	RPUSD4	99	42.515	Sarcophilus_harrisii
ENSPMAG00000008183	rpusd4	96	45.015	ENSSFOG00015006203	rpusd4	83	44.643	Scleropages_formosus
ENSPMAG00000008183	rpusd4	98	40.708	ENSSMAG00000020978	rpusd4	81	40.708	Scophthalmus_maximus
ENSPMAG00000008183	rpusd4	94	40.184	ENSSDUG00000013399	rpusd4	78	40.184	Seriola_dumerili
ENSPMAG00000008183	rpusd4	97	39.881	ENSSLDG00000023507	rpusd4	81	39.881	Seriola_lalandi_dorsalis
ENSPMAG00000008183	rpusd4	96	43.976	ENSSPUG00000001401	RPUSD4	85	44.379	Sphenodon_punctatus
ENSPMAG00000008183	rpusd4	98	40.708	ENSSPAG00000012163	rpusd4	79	40.708	Stegastes_partitus
ENSPMAG00000008183	rpusd4	98	43.275	ENSSSCG00000015233	RPUSD4	82	44.737	Sus_scrofa
ENSPMAG00000008183	rpusd4	96	41.994	ENSTGUG00000000773	RPUSD4	100	41.994	Taeniopygia_guttata
ENSPMAG00000008183	rpusd4	94	41.975	ENSTRUG00000012283	rpusd4	76	41.975	Takifugu_rubripes
ENSPMAG00000008183	rpusd4	97	40.476	ENSTNIG00000014676	rpusd4	79	40.476	Tetraodon_nigroviridis
ENSPMAG00000008183	rpusd4	97	44.643	ENSTTRG00000001555	RPUSD4	81	46.131	Tursiops_truncatus
ENSPMAG00000008183	rpusd4	97	45.970	ENSUMAG00000002219	RPUSD4	80	45.970	Ursus_maritimus
ENSPMAG00000008183	rpusd4	60	44.660	ENSVPAG00000001066	RPUSD4	77	44.643	Vicugna_pacos
ENSPMAG00000008183	rpusd4	97	44.478	ENSVVUG00000020101	RPUSD4	80	44.611	Vulpes_vulpes
ENSPMAG00000008183	rpusd4	97	40.533	ENSXCOG00000004676	rpusd4	81	40.237	Xiphophorus_couchianus
ENSPMAG00000008183	rpusd4	97	40.828	ENSXMAG00000023351	rpusd4	79	40.828	Xiphophorus_maculatus