EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMAG00000008197 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 7257 bases
Position: chrGL481227:16752-24008
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000009025	RNA_pol_Rpb2_7	PF04560.20	5e-35	1	1
ENSPMAP00000009025	RNA_pol_Rpb2_6	PF00562.28	1.4e-126	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000009064	-	1452	-	ENSPMAP00000009025	483 (aa)	-	S4RUY5

Gene Model

Click here to download ENSPMAG00000008197's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000008197's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMAG00000008197	-	99	45.996	ENSPMAG00000001164	-	55	45.996

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000008197	-	99	38.076	ENSG00000125630	POLR1B	67	33.482	Homo_sapiens
ENSPMAG00000008197	-	99	39.044	ENSACAG00000007117	-	69	39.243	Anolis_carolinensis
ENSPMAG00000008197	-	99	38.076	ENSANAG00000026201	POLR1B	50	38.076	Aotus_nancymaae
ENSPMAG00000008197	-	99	38.076	ENSCJAG00000016433	POLR1B	50	38.076	Callithrix_jacchus
ENSPMAG00000008197	-	99	38.400	ENSTSYG00000003669	POLR1B	51	38.400	Carlito_syrichta
ENSPMAG00000008197	-	99	38.076	ENSCCAG00000035252	POLR1B	50	38.076	Cebus_capucinus
ENSPMAG00000008197	-	99	38.076	ENSCATG00000037382	POLR1B	50	38.076	Cercocebus_atys
ENSPMAG00000008197	-	99	38.076	ENSCHOG00000007229	POLR1B	50	38.076	Choloepus_hoffmanni
ENSPMAG00000008197	-	99	37.952	ENSCPBG00000003962	POLR1B	52	37.751	Chrysemys_picta_bellii
ENSPMAG00000008197	-	99	75.833	ENSCSAVG00000007982	-	56	75.949	Ciona_savignyi
ENSPMAG00000008197	-	99	38.076	ENSCANG00000039531	POLR1B	50	38.076	Colobus_angolensis_palliatus
ENSPMAG00000008197	-	78	47.059	ENSEBUG00000015791	polr1b	54	47.059	Eptatretus_burgeri
ENSPMAG00000008197	-	99	38.353	ENSFCAG00000008091	POLR1B	50	38.353	Felis_catus
ENSPMAG00000008197	-	67	46.483	ENSGAFG00000016488	-	99	46.483	Gambusia_affinis
ENSPMAG00000008197	-	99	38.076	ENSGGOG00000013494	POLR1B	50	38.076	Gorilla_gorilla
ENSPMAG00000008197	-	71	81.686	ENSHBUG00000008882	polr3b	100	81.686	Haplochromis_burtoni
ENSPMAG00000008197	-	99	38.281	ENSLAFG00000007659	POLR1B	50	38.281	Loxodonta_africana
ENSPMAG00000008197	-	98	46.074	ENSLAFG00000003198	POLR2B	51	46.074	Loxodonta_africana
ENSPMAG00000008197	-	99	38.076	ENSMFAG00000032912	POLR1B	50	38.076	Macaca_fascicularis
ENSPMAG00000008197	-	99	38.076	ENSMMUG00000009468	POLR1B	50	38.076	Macaca_mulatta
ENSPMAG00000008197	-	99	38.076	ENSMNEG00000036047	POLR1B	50	38.076	Macaca_nemestrina
ENSPMAG00000008197	-	99	38.076	ENSMLEG00000030588	POLR1B	52	38.076	Mandrillus_leucophaeus
ENSPMAG00000008197	-	98	45.041	ENSMICG00000015166	POLR2B	95	45.041	Microcebus_murinus
ENSPMAG00000008197	-	99	38.076	ENSNLEG00000001656	POLR1B	51	38.076	Nomascus_leucogenys
ENSPMAG00000008197	-	71	87.500	ENSOMEG00000010619	polr3b	100	87.500	Oryzias_melastigma
ENSPMAG00000008197	-	99	38.076	ENSPPAG00000002774	POLR1B	50	38.076	Pan_paniscus
ENSPMAG00000008197	-	99	38.160	ENSPPRG00000005760	POLR1B	50	38.160	Panthera_pardus
ENSPMAG00000008197	-	99	38.160	ENSPTIG00000013496	POLR1B	50	38.160	Panthera_tigris_altaica
ENSPMAG00000008197	-	99	38.076	ENSPTRG00000012366	POLR1B	50	38.076	Pan_troglodytes
ENSPMAG00000008197	-	99	38.076	ENSPANG00000023423	POLR1B	50	38.076	Papio_anubis
ENSPMAG00000008197	-	71	87.500	ENSPMGG00000013671	polr3b	100	87.500	Periophthalmus_magnuspinnatus
ENSPMAG00000008197	-	73	30.390	ENSPMGG00000017095	-	99	30.390	Periophthalmus_magnuspinnatus
ENSPMAG00000008197	-	93	37.473	ENSPCOG00000009281	-	98	37.473	Propithecus_coquereli
ENSPMAG00000008197	-	99	38.076	ENSRBIG00000019757	POLR1B	50	38.076	Rhinopithecus_bieti
ENSPMAG00000008197	-	98	46.074	ENSRBIG00000042838	POLR2B	95	46.074	Rhinopithecus_bieti
ENSPMAG00000008197	-	99	38.277	ENSSBOG00000024562	POLR1B	50	38.277	Saimiri_boliviensis_boliviensis
ENSPMAG00000008197	-	71	89.244	ENSSPUG00000004905	-	100	89.244	Sphenodon_punctatus
ENSPMAG00000008197	-	98	45.661	ENSSPUG00000018295	POLR2B	95	45.661	Sphenodon_punctatus
ENSPMAG00000008197	-	99	38.755	ENSSPUG00000014298	POLR1B	52	38.755	Sphenodon_punctatus
ENSPMAG00000008197	-	71	86.628	ENSSPAG00000008909	polr3b	100	86.628	Stegastes_partitus
ENSPMAG00000008197	-	98	46.901	ENSSPAG00000019229	-	95	46.901	Stegastes_partitus
ENSPMAG00000008197	-	81	43.069	ENSUAMG00000003345	-	90	43.069	Ursus_americanus
ENSPMAG00000008197	-	100	90.269	ENSUAMG00000024267	POLR3B	76	90.269	Ursus_americanus
ENSPMAG00000008197	-	67	46.177	ENSXCOG00000014654	-	99	46.177	Xiphophorus_couchianus