EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMAG00000008265 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 20494 bases
Position: chrGL477723:307292-327785
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000009104	PAZ	PF02170.22	6.2e-25	1	1
ENSPMAP00000009101	PAZ	PF02170.22	6.8e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000009143	-	1176	-	ENSPMAP00000009104	392 (aa)	-	S4RV64
ENSPMAT00000009140	-	1191	-	ENSPMAP00000009101	397 (aa)	-	S4RV61
ENSPMAT00000009150	-	777	-	ENSPMAP00000009111	259 (aa)	-	S4RV71

Gene Model

Click here to download ENSPMAG00000008265's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000008265's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMAG00000008265	-	99	60.599	ENSPMAG00000008651	-	55	60.599
ENSPMAG00000008265	-	79	54.462	ENSPMAG00000008422	-	95	54.462

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000008265	-	99	62.000	ENSG00000123908	AGO2	100	66.667	Homo_sapiens
ENSPMAG00000008265	-	100	61.940	ENSANAG00000027399	AGO2	91	61.940	Aotus_nancymaae
ENSPMAG00000008265	-	100	61.692	ENSTSYG00000007281	AGO2	89	61.692	Carlito_syrichta
ENSPMAG00000008265	-	99	62.000	ENSCCAG00000035031	AGO2	90	61.940	Cebus_capucinus
ENSPMAG00000008265	-	94	51.163	ENSEBUG00000014681	ago2	54	51.163	Eptatretus_burgeri
ENSPMAG00000008265	-	100	61.940	ENSMICG00000004427	AGO2	91	61.940	Microcebus_murinus
ENSPMAG00000008265	-	99	53.750	ENSNLEG00000001461	AGO2	50	52.137	Nomascus_leucogenys
ENSPMAG00000008265	-	99	56.500	ENSPANG00000005604	AGO2	51	55.271	Papio_anubis
ENSPMAG00000008265	-	85	61.224	ENSPPYG00000029451	-	94	61.383	Pongo_abelii
ENSPMAG00000008265	-	100	61.940	ENSRBIG00000028225	AGO2	88	61.940	Rhinopithecus_bieti
ENSPMAG00000008265	-	99	62.000	ENSSBOG00000018934	AGO2	52	60.440	Saimiri_boliviensis_boliviensis