EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000008272 (Gene tree)
Gene ID: -
Gene Symbol: sf1
Alias: -
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 17369 bases
Position: chrGL478506:122086-139454
Accession: ZDB-GENE-030131-2492
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000009130	KH_1	PF00013.29	9.1e-08	1	1
ENSPMAP00000009130	zf-CCHC	PF00098.23	0.00016	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000009169	-	2203	-	ENSPMAP00000009130	696 (aa)	-	S4RV90

Gene Model

Click here to download ENSPMAG00000008272's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000008272's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000008272	sf1	53	67.828	ENSANAG00000026664	-	80	72.321	Aotus_nancymaae
ENSPMAG00000008272	sf1	53	66.938	ENSCJAG00000002780	SF1	55	69.714	Callithrix_jacchus
ENSPMAG00000008272	sf1	53	66.938	ENSCHIG00000025867	SF1	64	69.714	Capra_hircus
ENSPMAG00000008272	sf1	53	66.938	ENSCCAG00000037881	SF1	80	72.107	Cebus_capucinus
ENSPMAG00000008272	sf1	54	58.530	ENSCCAG00000023781	-	74	63.690	Cebus_capucinus
ENSPMAG00000008272	sf1	53	66.488	ENSCATG00000011564	SF1	80	72.107	Cercocebus_atys
ENSPMAG00000008272	sf1	53	66.938	ENSCSAG00000007258	SF1	64	69.714	Chlorocebus_sabaeus
ENSPMAG00000008272	sf1	51	61.017	ENSCHOG00000006008	SF1	60	66.044	Choloepus_hoffmanni
ENSPMAG00000008272	sf1	53	66.488	ENSCANG00000042201	SF1	81	72.107	Colobus_angolensis_palliatus
ENSPMAG00000008272	sf1	53	67.027	ENSCGRG00001003677	Sf1	59	72.321	Cricetulus_griseus_chok1gshd
ENSPMAG00000008272	sf1	53	67.209	ENSCGRG00000001708	Sf1	62	72.321	Cricetulus_griseus_crigri
ENSPMAG00000008272	sf1	86	55.605	ENSEBUG00000012728	sf1	59	68.224	Eptatretus_burgeri
ENSPMAG00000008272	sf1	53	66.938	ENSEASG00005018272	SF1	64	69.429	Equus_asinus_asinus
ENSPMAG00000008272	sf1	53	67.209	ENSECAG00000024544	SF1	64	69.714	Equus_caballus
ENSPMAG00000008272	sf1	53	66.938	ENSFCAG00000012231	SF1	55	69.714	Felis_catus
ENSPMAG00000008272	sf1	53	66.757	ENSFDAG00000009833	SF1	60	72.321	Fukomys_damarensis
ENSPMAG00000008272	sf1	53	66.757	ENSHGLG00000009541	SF1	59	72.321	Heterocephalus_glaber_female
ENSPMAG00000008272	sf1	53	66.757	ENSHGLG00100013879	-	60	72.321	Heterocephalus_glaber_male
ENSPMAG00000008272	sf1	53	57.453	ENSSTOG00000024353	-	60	61.607	Ictidomys_tridecemlineatus
ENSPMAG00000008272	sf1	56	63.659	ENSKMAG00000005854	sf1	51	71.687	Kryptolebias_marmoratus
ENSPMAG00000008272	sf1	56	62.438	ENSLBEG00000019836	sf1	50	70.427	Labrus_bergylta
ENSPMAG00000008272	sf1	53	66.488	ENSMFAG00000033122	SF1	80	72.107	Macaca_fascicularis
ENSPMAG00000008272	sf1	53	66.938	ENSMMUG00000022606	SF1	82	72.321	Macaca_mulatta
ENSPMAG00000008272	sf1	53	66.938	ENSMNEG00000037901	SF1	80	72.107	Macaca_nemestrina
ENSPMAG00000008272	sf1	53	66.488	ENSMLEG00000040706	SF1	81	72.107	Mandrillus_leucophaeus
ENSPMAG00000008272	sf1	53	67.027	ENSMAUG00000014064	Sf1	59	72.321	Mesocricetus_auratus
ENSPMAG00000008272	sf1	53	67.297	ENSMICG00000001202	SF1	80	72.485	Microcebus_murinus
ENSPMAG00000008272	sf1	58	63.081	ENSMMOG00000020474	sf1	61	62.683	Mola_mola
ENSPMAG00000008272	sf1	53	66.938	ENSMODG00000029407	SF1	73	72.107	Monodelphis_domestica
ENSPMAG00000008272	sf1	58	62.654	ENSMALG00000020521	sf1	66	62.162	Monopterus_albus
ENSPMAG00000008272	sf1	53	67.209	MGP_CAROLIEiJ_G0022607	Sf1	100	77.612	Mus_caroli
ENSPMAG00000008272	sf1	53	67.209	ENSMUSG00000024949	Sf1	100	77.612	Mus_musculus
ENSPMAG00000008272	sf1	53	67.209	MGP_PahariEiJ_G0014101	Sf1	100	77.612	Mus_pahari
ENSPMAG00000008272	sf1	53	67.209	MGP_SPRETEiJ_G0023518	Sf1	100	77.612	Mus_spretus
ENSPMAG00000008272	sf1	53	67.027	ENSNGAG00000005550	Sf1	59	72.321	Nannospalax_galili
ENSPMAG00000008272	sf1	53	66.488	ENSNLEG00000005236	-	81	72.107	Nomascus_leucogenys
ENSPMAG00000008272	sf1	52	66.940	ENSMEUG00000013424	SF1	63	72.372	Notamacropus_eugenii
ENSPMAG00000008272	sf1	53	66.938	ENSPPAG00000002799	-	82	72.107	Pan_paniscus
ENSPMAG00000008272	sf1	53	66.938	ENSPPRG00000013566	SF1	53	72.321	Panthera_pardus
ENSPMAG00000008272	sf1	53	66.938	ENSPTIG00000016141	SF1	60	72.321	Panthera_tigris_altaica
ENSPMAG00000008272	sf1	58	63.183	ENSPTRG00000003846	SF1	81	72.107	Pan_troglodytes
ENSPMAG00000008272	sf1	53	66.938	ENSPANG00000020754	SF1	80	72.107	Papio_anubis
ENSPMAG00000008272	sf1	53	67.209	ENSPEMG00000010463	Sf1	59	72.321	Peromyscus_maniculatus_bairdii
ENSPMAG00000008272	sf1	53	66.938	ENSPPYG00000003098	-	66	69.714	Pongo_abelii
ENSPMAG00000008272	sf1	53	67.297	ENSPCOG00000027546	SF1	80	72.485	Propithecus_coquereli
ENSPMAG00000008272	sf1	53	66.938	ENSRBIG00000042818	SF1	81	72.107	Rhinopithecus_bieti
ENSPMAG00000008272	sf1	53	66.938	ENSRROG00000045655	SF1	81	72.107	Rhinopithecus_roxellana
ENSPMAG00000008272	sf1	65	56.504	ENSSMAG00000007549	sf1	65	62.028	Scophthalmus_maximus
ENSPMAG00000008272	sf1	56	62.712	ENSSDUG00000003903	sf1	52	69.452	Seriola_dumerili
ENSPMAG00000008272	sf1	53	63.686	ENSSARG00000008180	SF1	65	68.452	Sorex_araneus
ENSPMAG00000008272	sf1	53	67.209	ENSSSCG00000013021	SF1	64	70.000	Sus_scrofa
ENSPMAG00000008272	sf1	53	66.938	ENSUMAG00000007268	SF1	64	72.321	Ursus_maritimus
ENSPMAG00000008272	sf1	53	66.938	ENSVVUG00000028585	SF1	64	69.714	Vulpes_vulpes
ENSPMAG00000008272	sf1	56	63.081	ENSXMAG00000007822	sf1	65	61.995	Xiphophorus_maculatus