EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000008360 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Plus strand
Length: 12141 bases
Position: chrGL481435:2253-14393
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000009230	tRNA_anti-codon	PF01336.25	1.2e-12	1	1
ENSPMAP00000009230	tRNA-synt_2	PF00152.20	4.1e-78	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000009270	-	2408	-	ENSPMAP00000009230	622 (aa)	-	S4RVJ0

Gene Model

Click here to download ENSPMAG00000008360's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000008360's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000008360	-	99	70.853	ENSG00000065427	KARS	100	78.431	Homo_sapiens
ENSPMAG00000008360	-	91	76.021	ENSAPOG00000010997	kars	96	76.095	Acanthochromis_polyacanthus
ENSPMAG00000008360	-	99	70.853	ENSAMEG00000005347	KARS	98	70.853	Ailuropoda_melanoleuca
ENSPMAG00000008360	-	91	70.693	ENSACIG00000000304	kars	97	70.515	Amphilophus_citrinellus
ENSPMAG00000008360	-	90	75.801	ENSAOCG00000012971	kars	95	75.592	Amphiprion_ocellaris
ENSPMAG00000008360	-	91	75.532	ENSAPEG00000011144	kars	97	75.355	Amphiprion_percula
ENSPMAG00000008360	-	91	75.666	ENSATEG00000004954	kars	97	75.488	Anabas_testudineus
ENSPMAG00000008360	-	89	74.141	ENSAPLG00000012705	KARS	99	74.141	Anas_platyrhynchos
ENSPMAG00000008360	-	84	77.672	ENSACAG00000007577	KARS	88	75.579	Anolis_carolinensis
ENSPMAG00000008360	-	99	71.498	ENSANAG00000030403	-	95	75.000	Aotus_nancymaae
ENSPMAG00000008360	-	97	59.157	ENSANAG00000031739	-	96	61.856	Aotus_nancymaae
ENSPMAG00000008360	-	93	74.483	ENSACLG00000001613	kars	95	76.021	Astatotilapia_calliptera
ENSPMAG00000008360	-	91	74.245	ENSAMXG00000030719	kars	97	73.890	Astyanax_mexicanus
ENSPMAG00000008360	-	91	74.177	ENSBTAG00000015677	KARS	74	74.177	Bos_taurus
ENSPMAG00000008360	-	90	59.893	WBGene00002238	kars-1	97	63.400	Caenorhabditis_elegans
ENSPMAG00000008360	-	99	71.659	ENSCJAG00000014213	KARS	96	75.575	Callithrix_jacchus
ENSPMAG00000008360	-	99	71.014	ENSCAFG00000020069	KARS	98	71.014	Canis_familiaris
ENSPMAG00000008360	-	99	71.014	ENSCAFG00020001721	KARS	95	74.296	Canis_lupus_dingo
ENSPMAG00000008360	-	99	71.729	ENSCHIG00000014108	-	95	74.912	Capra_hircus
ENSPMAG00000008360	-	92	73.380	ENSCHIG00000016073	-	94	73.380	Capra_hircus
ENSPMAG00000008360	-	99	71.222	ENSTSYG00000001643	KARS	97	74.956	Carlito_syrichta
ENSPMAG00000008360	-	99	67.252	ENSCAPG00000016234	KARS	98	67.252	Cavia_aperea
ENSPMAG00000008360	-	99	71.885	ENSCPOG00000012036	KARS	99	71.885	Cavia_porcellus
ENSPMAG00000008360	-	99	71.337	ENSCCAG00000034307	-	95	74.824	Cebus_capucinus
ENSPMAG00000008360	-	91	58.290	ENSCCAG00000030337	-	97	60.788	Cebus_capucinus
ENSPMAG00000008360	-	99	69.760	ENSCATG00000038129	KARS	96	73.171	Cercocebus_atys
ENSPMAG00000008360	-	99	71.520	ENSCLAG00000007905	KARS	95	75.176	Chinchilla_lanigera
ENSPMAG00000008360	-	99	69.440	ENSCSAG00000003664	KARS	98	69.440	Chlorocebus_sabaeus
ENSPMAG00000008360	-	73	78.556	ENSCHOG00000013447	KARS	73	78.556	Choloepus_hoffmanni
ENSPMAG00000008360	-	99	71.429	ENSCPBG00000026969	KARS	96	75.175	Chrysemys_picta_bellii
ENSPMAG00000008360	-	83	71.236	ENSCPBG00000002553	-	94	71.236	Chrysemys_picta_bellii
ENSPMAG00000008360	-	91	66.078	ENSCING00000009513	-	97	66.078	Ciona_intestinalis
ENSPMAG00000008360	-	51	68.966	ENSCSAVG00000001136	-	99	68.966	Ciona_savignyi
ENSPMAG00000008360	-	90	66.607	ENSCSAVG00000007684	-	99	63.620	Ciona_savignyi
ENSPMAG00000008360	-	99	66.454	ENSCANG00000032813	KARS	95	69.580	Colobus_angolensis_palliatus
ENSPMAG00000008360	-	99	72.045	ENSCGRG00001004055	KARS	95	76.098	Cricetulus_griseus_chok1gshd
ENSPMAG00000008360	-	99	72.045	ENSCGRG00000014242	KARS	95	76.098	Cricetulus_griseus_crigri
ENSPMAG00000008360	-	91	75.309	ENSCSEG00000008324	kars	97	75.132	Cynoglossus_semilaevis
ENSPMAG00000008360	-	91	74.205	ENSCVAG00000019686	kars	98	74.028	Cyprinodon_variegatus
ENSPMAG00000008360	-	91	75.133	ENSDARG00000103799	kars	99	78.235	Danio_rerio
ENSPMAG00000008360	-	99	70.853	ENSDNOG00000002241	KARS	98	70.720	Dasypus_novemcinctus
ENSPMAG00000008360	-	99	71.520	ENSDORG00000004780	-	95	75.350	Dipodomys_ordii
ENSPMAG00000008360	-	88	60.799	ENSDORG00000024214	-	93	61.243	Dipodomys_ordii
ENSPMAG00000008360	-	86	68.889	FBgn0027084	LysRS	98	67.190	Drosophila_melanogaster
ENSPMAG00000008360	-	99	71.840	ENSETEG00000008353	KARS	98	71.840	Echinops_telfairi
ENSPMAG00000008360	-	90	74.510	ENSEBUG00000001284	-	95	74.332	Eptatretus_burgeri
ENSPMAG00000008360	-	99	71.750	ENSEASG00005013497	KARS	99	71.750	Equus_asinus_asinus
ENSPMAG00000008360	-	92	74.912	ENSECAG00000013424	KARS	95	74.912	Equus_caballus
ENSPMAG00000008360	-	98	65.905	ENSEEUG00000007042	KARS	99	65.329	Erinaceus_europaeus
ENSPMAG00000008360	-	90	69.039	ENSELUG00000014575	kars	96	69.039	Esox_lucius
ENSPMAG00000008360	-	99	71.521	ENSFCAG00000008573	KARS	99	70.813	Felis_catus
ENSPMAG00000008360	-	91	74.603	ENSFALG00000002543	KARS	96	73.989	Ficedula_albicollis
ENSPMAG00000008360	-	99	71.337	ENSFDAG00000007155	KARS	95	74.648	Fukomys_damarensis
ENSPMAG00000008360	-	91	74.558	ENSFHEG00000006172	kars	96	74.820	Fundulus_heteroclitus
ENSPMAG00000008360	-	92	72.743	ENSGMOG00000002633	kars	93	72.743	Gadus_morhua
ENSPMAG00000008360	-	90	75.671	ENSGALG00000000907	KARS	98	75.671	Gallus_gallus
ENSPMAG00000008360	-	91	74.600	ENSGAFG00000017252	kars	97	74.778	Gambusia_affinis
ENSPMAG00000008360	-	95	72.000	ENSGACG00000015749	kars	94	75.045	Gasterosteus_aculeatus
ENSPMAG00000008360	-	84	70.229	ENSGAGG00000011960	-	98	70.229	Gopherus_agassizii
ENSPMAG00000008360	-	91	75.661	ENSGAGG00000023836	KARS	99	71.359	Gopherus_agassizii
ENSPMAG00000008360	-	99	70.853	ENSGGOG00000005515	KARS	95	74.296	Gorilla_gorilla
ENSPMAG00000008360	-	93	74.483	ENSHBUG00000013619	kars	95	76.021	Haplochromis_burtoni
ENSPMAG00000008360	-	91	60.381	ENSHGLG00000001298	-	95	60.381	Heterocephalus_glaber_female
ENSPMAG00000008360	-	99	71.520	ENSHGLG00000011898	KARS	98	74.956	Heterocephalus_glaber_female
ENSPMAG00000008360	-	91	66.549	ENSHGLG00000015235	-	95	66.549	Heterocephalus_glaber_female
ENSPMAG00000008360	-	99	71.520	ENSHGLG00100012264	KARS	95	74.825	Heterocephalus_glaber_male
ENSPMAG00000008360	-	91	60.208	ENSHGLG00100006466	-	95	60.208	Heterocephalus_glaber_male
ENSPMAG00000008360	-	91	66.725	ENSHGLG00100012523	-	95	69.170	Heterocephalus_glaber_male
ENSPMAG00000008360	-	91	75.133	ENSHCOG00000002900	kars	94	75.133	Hippocampus_comes
ENSPMAG00000008360	-	91	75.887	ENSIPUG00000009862	kars	97	75.133	Ictalurus_punctatus
ENSPMAG00000008360	-	98	71.987	ENSSTOG00000004205	KARS	94	75.398	Ictidomys_tridecemlineatus
ENSPMAG00000008360	-	98	72.876	ENSJJAG00000020406	Kars	95	75.929	Jaculus_jaculus
ENSPMAG00000008360	-	96	72.742	ENSKMAG00000006434	kars	97	75.488	Kryptolebias_marmoratus
ENSPMAG00000008360	-	96	71.642	ENSLBEG00000026537	kars	99	71.642	Labrus_bergylta
ENSPMAG00000008360	-	98	71.475	ENSLACG00000006667	KARS	97	71.967	Latimeria_chalumnae
ENSPMAG00000008360	-	81	74.506	ENSLACG00000016399	-	99	74.506	Latimeria_chalumnae
ENSPMAG00000008360	-	91	76.377	ENSLOCG00000004002	kars	96	76.377	Lepisosteus_oculatus
ENSPMAG00000008360	-	87	70.686	ENSLOCG00000013608	-	97	70.686	Lepisosteus_oculatus
ENSPMAG00000008360	-	98	71.129	ENSLAFG00000015340	KARS	98	71.129	Loxodonta_africana
ENSPMAG00000008360	-	99	69.920	ENSMFAG00000040024	KARS	95	73.427	Macaca_fascicularis
ENSPMAG00000008360	-	79	70.800	ENSMNEG00000035832	-	95	70.800	Macaca_nemestrina
ENSPMAG00000008360	-	99	69.280	ENSMNEG00000042879	-	95	73.427	Macaca_nemestrina
ENSPMAG00000008360	-	99	69.760	ENSMLEG00000034947	KARS	95	73.252	Mandrillus_leucophaeus
ENSPMAG00000008360	-	95	73.051	ENSMAMG00000021559	kars	96	73.051	Mastacembelus_armatus
ENSPMAG00000008360	-	93	74.483	ENSMZEG00005014382	kars	95	76.021	Maylandia_zebra
ENSPMAG00000008360	-	90	73.404	ENSMGAG00000009000	KARS	97	75.184	Meleagris_gallopavo
ENSPMAG00000008360	-	99	71.337	ENSMICG00000011997	KARS	99	71.337	Microcebus_murinus
ENSPMAG00000008360	-	99	72.115	ENSMOCG00000011829	Kars	95	75.832	Microtus_ochrogaster
ENSPMAG00000008360	-	91	73.030	ENSMOCG00000019029	-	95	73.030	Microtus_ochrogaster
ENSPMAG00000008360	-	90	74.510	ENSMMOG00000016934	kars	99	74.510	Mola_mola
ENSPMAG00000008360	-	99	66.345	ENSMODG00000002238	-	99	66.828	Monodelphis_domestica
ENSPMAG00000008360	-	90	74.821	ENSMODG00000002215	-	97	74.821	Monodelphis_domestica
ENSPMAG00000008360	-	91	73.712	ENSMALG00000020858	kars	97	73.535	Monopterus_albus
ENSPMAG00000008360	-	85	74.868	MGP_CAROLIEiJ_G0031588	Kars	98	74.868	Mus_caroli
ENSPMAG00000008360	-	99	72.115	ENSMUSG00000031948	Kars	95	75.657	Mus_musculus
ENSPMAG00000008360	-	91	76.007	MGP_PahariEiJ_G0023186	Kars	95	76.007	Mus_pahari
ENSPMAG00000008360	-	99	72.115	MGP_SPRETEiJ_G0032706	Kars	95	75.657	Mus_spretus
ENSPMAG00000008360	-	99	71.108	ENSMPUG00000009871	KARS	99	71.268	Mustela_putorius_furo
ENSPMAG00000008360	-	59	51.330	ENSMLUG00000026871	-	76	51.330	Myotis_lucifugus
ENSPMAG00000008360	-	98	71.336	ENSMLUG00000015119	-	96	73.611	Myotis_lucifugus
ENSPMAG00000008360	-	87	74.317	ENSNGAG00000022944	-	93	74.317	Nannospalax_galili
ENSPMAG00000008360	-	91	75.482	ENSNGAG00000018820	-	95	75.482	Nannospalax_galili
ENSPMAG00000008360	-	91	75.844	ENSNBRG00000011098	kars	95	75.844	Neolamprologus_brichardi
ENSPMAG00000008360	-	99	70.096	ENSNLEG00000013072	KARS	97	72.680	Nomascus_leucogenys
ENSPMAG00000008360	-	97	68.152	ENSMEUG00000008684	KARS	97	67.492	Notamacropus_eugenii
ENSPMAG00000008360	-	94	73.649	ENSOPRG00000012544	KARS	96	73.649	Ochotona_princeps
ENSPMAG00000008360	-	91	54.049	ENSODEG00000009464	-	98	54.049	Octodon_degus
ENSPMAG00000008360	-	99	72.698	ENSODEG00000013099	-	97	76.554	Octodon_degus
ENSPMAG00000008360	-	91	76.064	ENSONIG00000005937	kars	96	76.241	Oreochromis_niloticus
ENSPMAG00000008360	-	90	75.752	ENSOANG00000008179	KARS	94	75.752	Ornithorhynchus_anatinus
ENSPMAG00000008360	-	91	70.629	ENSOCUG00000015553	KARS	95	70.629	Oryctolagus_cuniculus
ENSPMAG00000008360	-	96	72.351	ENSORLG00000007627	kars	98	72.351	Oryzias_latipes
ENSPMAG00000008360	-	96	72.020	ENSORLG00020010056	kars	98	72.020	Oryzias_latipes_hni
ENSPMAG00000008360	-	96	71.947	ENSORLG00015008179	kars	98	71.947	Oryzias_latipes_hsok
ENSPMAG00000008360	-	95	72.819	ENSOMEG00000001710	kars	98	74.692	Oryzias_melastigma
ENSPMAG00000008360	-	99	66.667	ENSOGAG00000005903	KARS	98	66.667	Otolemur_garnettii
ENSPMAG00000008360	-	85	74.296	ENSOARG00000006928	KARS	93	74.296	Ovis_aries
ENSPMAG00000008360	-	99	70.531	ENSPPAG00000036192	KARS	95	74.120	Pan_paniscus
ENSPMAG00000008360	-	99	71.845	ENSPPRG00000003027	KARS	95	75.000	Panthera_pardus
ENSPMAG00000008360	-	99	71.683	ENSPTIG00000008011	KARS	95	74.825	Panthera_tigris_altaica
ENSPMAG00000008360	-	99	70.692	ENSPTRG00000008364	KARS	95	74.120	Pan_troglodytes
ENSPMAG00000008360	-	99	69.760	ENSPANG00000024106	KARS	98	69.760	Papio_anubis
ENSPMAG00000008360	-	96	72.471	ENSPKIG00000009896	kars	96	74.910	Paramormyrops_kingsleyae
ENSPMAG00000008360	-	90	75.223	ENSPSIG00000009294	KARS	96	75.223	Pelodiscus_sinensis
ENSPMAG00000008360	-	83	72.674	ENSPSIG00000003041	-	94	72.674	Pelodiscus_sinensis
ENSPMAG00000008360	-	83	77.992	ENSPMGG00000006117	kars	99	74.773	Periophthalmus_magnuspinnatus
ENSPMAG00000008360	-	99	71.246	ENSPEMG00000012277	Kars	95	75.175	Peromyscus_maniculatus_bairdii
ENSPMAG00000008360	-	99	68.831	ENSPCIG00000025469	-	98	68.226	Phascolarctos_cinereus
ENSPMAG00000008360	-	91	75.482	ENSPCIG00000010761	-	95	75.482	Phascolarctos_cinereus
ENSPMAG00000008360	-	91	73.768	ENSPFOG00000013253	kars	92	73.768	Poecilia_formosa
ENSPMAG00000008360	-	91	73.592	ENSPLAG00000004189	kars	98	73.415	Poecilia_latipinna
ENSPMAG00000008360	-	91	73.944	ENSPMEG00000015698	kars	98	73.768	Poecilia_mexicana
ENSPMAG00000008360	-	91	73.712	ENSPREG00000023179	kars	97	73.535	Poecilia_reticulata
ENSPMAG00000008360	-	99	70.853	ENSPPYG00000007567	KARS	98	70.853	Pongo_abelii
ENSPMAG00000008360	-	82	72.320	ENSPCAG00000010790	KARS	98	72.320	Procavia_capensis
ENSPMAG00000008360	-	99	63.430	ENSPCOG00000003166	KARS	85	78.214	Propithecus_coquereli
ENSPMAG00000008360	-	93	74.221	ENSPVAG00000006746	KARS	92	74.221	Pteropus_vampyrus
ENSPMAG00000008360	-	93	74.483	ENSPNYG00000013095	kars	95	76.021	Pundamilia_nyererei
ENSPMAG00000008360	-	91	75.133	ENSPNAG00000013828	kars	97	74.956	Pygocentrus_nattereri
ENSPMAG00000008360	-	99	71.750	ENSRNOG00000019456	Kars	99	71.611	Rattus_norvegicus
ENSPMAG00000008360	-	99	69.920	ENSRBIG00000030118	KARS	96	73.171	Rhinopithecus_bieti
ENSPMAG00000008360	-	99	69.920	ENSRROG00000041418	KARS	96	73.171	Rhinopithecus_roxellana
ENSPMAG00000008360	-	90	55.342	YDR037W	KRS1	95	55.245	Saccharomyces_cerevisiae
ENSPMAG00000008360	-	75	33.600	YNL073W	-	86	33.600	Saccharomyces_cerevisiae
ENSPMAG00000008360	-	99	71.820	ENSSBOG00000019255	KARS	98	75.575	Saimiri_boliviensis_boliviensis
ENSPMAG00000008360	-	99	60.193	ENSSHAG00000002050	-	98	60.193	Sarcophilus_harrisii
ENSPMAG00000008360	-	90	71.605	ENSSHAG00000001359	-	98	71.605	Sarcophilus_harrisii
ENSPMAG00000008360	-	88	63.553	ENSSHAG00000009005	-	98	63.553	Sarcophilus_harrisii
ENSPMAG00000008360	-	89	76.216	ENSSFOG00015014837	kars	93	78.764	Scleropages_formosus
ENSPMAG00000008360	-	91	74.956	ENSSMAG00000021441	kars	97	74.778	Scophthalmus_maximus
ENSPMAG00000008360	-	95	73.051	ENSSDUG00000001202	kars	97	75.311	Seriola_dumerili
ENSPMAG00000008360	-	90	75.623	ENSSLDG00000021220	kars	97	75.623	Seriola_lalandi_dorsalis
ENSPMAG00000008360	-	71	84.821	ENSSARG00000011493	KARS	77	84.821	Sorex_araneus
ENSPMAG00000008360	-	57	67.705	ENSSPUG00000000449	-	82	67.705	Sphenodon_punctatus
ENSPMAG00000008360	-	91	75.567	ENSSPUG00000004974	KARS	96	74.520	Sphenodon_punctatus
ENSPMAG00000008360	-	91	75.133	ENSSPAG00000020365	kars	99	73.913	Stegastes_partitus
ENSPMAG00000008360	-	99	71.292	ENSSSCG00000002704	KARS	99	71.451	Sus_scrofa
ENSPMAG00000008360	-	90	75.445	ENSTGUG00000008400	KARS	99	74.823	Taeniopygia_guttata
ENSPMAG00000008360	-	94	73.116	ENSTRUG00000017551	kars	95	71.891	Takifugu_rubripes
ENSPMAG00000008360	-	83	77.220	ENSTNIG00000009351	kars	98	72.426	Tetraodon_nigroviridis
ENSPMAG00000008360	-	91	57.496	ENSTBEG00000004610	KARS	79	65.721	Tupaia_belangeri
ENSPMAG00000008360	-	99	70.560	ENSTTRG00000001221	KARS	98	71.014	Tursiops_truncatus
ENSPMAG00000008360	-	99	70.853	ENSUAMG00000017557	KARS	95	74.296	Ursus_americanus
ENSPMAG00000008360	-	99	70.853	ENSUMAG00000014559	KARS	98	70.853	Ursus_maritimus
ENSPMAG00000008360	-	98	70.521	ENSVPAG00000003716	KARS	97	70.684	Vicugna_pacos
ENSPMAG00000008360	-	99	70.853	ENSVVUG00000024338	KARS	97	74.908	Vulpes_vulpes
ENSPMAG00000008360	-	94	72.355	ENSXETG00000003569	kars	94	72.355	Xenopus_tropicalis
ENSPMAG00000008360	-	90	74.014	ENSXCOG00000011313	kars	93	77.220	Xiphophorus_couchianus
ENSPMAG00000008360	-	91	74.245	ENSXMAG00000003191	kars	97	74.423	Xiphophorus_maculatus