EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000008417 (Gene tree)
Gene ID: -
Gene Symbol: aptx
Alias: -
Full Name: aprataxin
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Plus strand
Length: 7886 bases
Position: chrGL476696:188586-196471
Accession: ZDB-GENE-040628-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000009270	DcpS_C	PF11969.8	6e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000009310	-	1053	-	ENSPMAP00000009270	351 (aa)	-	S4RVN0

Gene Model

Click here to download ENSPMAG00000008417's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000008417's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000008417	aptx	98	47.443	ENSG00000137074	APTX	95	53.684	Homo_sapiens
ENSPMAG00000008417	aptx	97	46.765	ENSAPOG00000008785	aptx	99	46.765	Acanthochromis_polyacanthus
ENSPMAG00000008417	aptx	98	47.278	ENSAMEG00000007648	APTX	96	47.278	Ailuropoda_melanoleuca
ENSPMAG00000008417	aptx	97	46.471	ENSACIG00000002035	aptx	99	46.471	Amphilophus_citrinellus
ENSPMAG00000008417	aptx	97	47.522	ENSAOCG00000000634	aptx	99	47.522	Amphiprion_ocellaris
ENSPMAG00000008417	aptx	97	47.522	ENSAPEG00000017253	aptx	99	47.522	Amphiprion_percula
ENSPMAG00000008417	aptx	97	47.353	ENSATEG00000017383	aptx	99	47.353	Anabas_testudineus
ENSPMAG00000008417	aptx	87	43.711	ENSAPLG00000015645	APTX	99	43.711	Anas_platyrhynchos
ENSPMAG00000008417	aptx	97	44.253	ENSACAG00000003581	APTX	95	44.253	Anolis_carolinensis
ENSPMAG00000008417	aptx	98	47.159	ENSANAG00000030160	APTX	96	47.159	Aotus_nancymaae
ENSPMAG00000008417	aptx	97	48.529	ENSACLG00000018887	aptx	99	48.529	Astatotilapia_calliptera
ENSPMAG00000008417	aptx	97	46.705	ENSAMXG00000039899	aptx	99	46.705	Astyanax_mexicanus
ENSPMAG00000008417	aptx	99	45.763	ENSBTAG00000013947	APTX	98	46.398	Bos_taurus
ENSPMAG00000008417	aptx	98	46.398	ENSCJAG00000007940	APTX	99	46.512	Callithrix_jacchus
ENSPMAG00000008417	aptx	98	47.159	ENSCAFG00000001812	APTX	99	47.278	Canis_familiaris
ENSPMAG00000008417	aptx	97	47.278	ENSCAFG00020015598	APTX	99	47.278	Canis_lupus_dingo
ENSPMAG00000008417	aptx	99	46.176	ENSCHIG00000012896	APTX	99	47.384	Capra_hircus
ENSPMAG00000008417	aptx	97	48.547	ENSTSYG00000003041	APTX	99	48.547	Carlito_syrichta
ENSPMAG00000008417	aptx	63	55.828	ENSCAPG00000013470	APTX	99	55.828	Cavia_aperea
ENSPMAG00000008417	aptx	97	46.667	ENSCPOG00000005975	APTX	99	55.618	Cavia_porcellus
ENSPMAG00000008417	aptx	97	46.571	ENSCCAG00000036783	APTX	99	46.571	Cebus_capucinus
ENSPMAG00000008417	aptx	98	47.443	ENSCATG00000042639	APTX	96	47.039	Cercocebus_atys
ENSPMAG00000008417	aptx	97	48.094	ENSCLAG00000012185	APTX	98	55.866	Chinchilla_lanigera
ENSPMAG00000008417	aptx	98	47.443	ENSCSAG00000009885	APTX	96	47.443	Chlorocebus_sabaeus
ENSPMAG00000008417	aptx	97	44.759	ENSCPBG00000023973	APTX	97	44.759	Chrysemys_picta_bellii
ENSPMAG00000008417	aptx	96	35.440	ENSCING00000008741	-	95	35.440	Ciona_intestinalis
ENSPMAG00000008417	aptx	95	34.072	ENSCSAVG00000008038	-	96	34.349	Ciona_savignyi
ENSPMAG00000008417	aptx	98	46.647	ENSCANG00000037253	APTX	99	47.278	Colobus_angolensis_palliatus
ENSPMAG00000008417	aptx	97	47.384	ENSCGRG00001000705	Aptx	97	56.425	Cricetulus_griseus_chok1gshd
ENSPMAG00000008417	aptx	97	47.384	ENSCGRG00000014159	Aptx	97	56.425	Cricetulus_griseus_crigri
ENSPMAG00000008417	aptx	97	45.588	ENSCSEG00000009549	aptx	99	45.588	Cynoglossus_semilaevis
ENSPMAG00000008417	aptx	97	47.230	ENSCVAG00000011942	aptx	99	47.230	Cyprinodon_variegatus
ENSPMAG00000008417	aptx	97	45.000	ENSDARG00000027143	aptx	99	44.706	Danio_rerio
ENSPMAG00000008417	aptx	98	46.991	ENSDNOG00000018498	APTX	96	46.991	Dasypus_novemcinctus
ENSPMAG00000008417	aptx	98	46.532	ENSDORG00000002139	Aptx	98	54.749	Dipodomys_ordii
ENSPMAG00000008417	aptx	51	40.782	FBgn0038704	CG5316	87	45.238	Drosophila_melanogaster
ENSPMAG00000008417	aptx	79	46.181	ENSETEG00000012459	APTX	78	47.059	Echinops_telfairi
ENSPMAG00000008417	aptx	97	42.936	ENSEBUG00000013914	aptx	96	42.936	Eptatretus_burgeri
ENSPMAG00000008417	aptx	97	47.813	ENSEASG00005004566	APTX	99	47.813	Equus_asinus_asinus
ENSPMAG00000008417	aptx	99	46.742	ENSECAG00000012674	APTX	94	46.742	Equus_caballus
ENSPMAG00000008417	aptx	83	46.284	ENSEEUG00000010693	APTX	98	45.425	Erinaceus_europaeus
ENSPMAG00000008417	aptx	98	48.397	ENSFCAG00000008728	APTX	99	48.406	Felis_catus
ENSPMAG00000008417	aptx	97	43.840	ENSFALG00000001230	APTX	99	43.840	Ficedula_albicollis
ENSPMAG00000008417	aptx	97	46.176	ENSFDAG00000013752	APTX	98	55.866	Fukomys_damarensis
ENSPMAG00000008417	aptx	80	48.454	ENSFHEG00000021328	aptx	73	48.454	Fundulus_heteroclitus
ENSPMAG00000008417	aptx	97	49.271	ENSGMOG00000012505	aptx	99	49.271	Gadus_morhua
ENSPMAG00000008417	aptx	97	45.299	ENSGALG00000001954	APTX	99	45.299	Gallus_gallus
ENSPMAG00000008417	aptx	97	48.387	ENSGAFG00000005086	aptx	99	48.387	Gambusia_affinis
ENSPMAG00000008417	aptx	97	46.765	ENSGACG00000017887	aptx	99	46.765	Gasterosteus_aculeatus
ENSPMAG00000008417	aptx	97	43.909	ENSGAGG00000013230	APTX	99	43.343	Gopherus_agassizii
ENSPMAG00000008417	aptx	84	47.492	ENSGGOG00000014232	APTX	96	46.780	Gorilla_gorilla
ENSPMAG00000008417	aptx	97	48.529	ENSHBUG00000021058	aptx	99	48.529	Haplochromis_burtoni
ENSPMAG00000008417	aptx	97	46.765	ENSHGLG00000015093	APTX	98	55.866	Heterocephalus_glaber_female
ENSPMAG00000008417	aptx	97	47.110	ENSHGLG00100013482	APTX	98	55.866	Heterocephalus_glaber_male
ENSPMAG00000008417	aptx	97	47.353	ENSHCOG00000018216	aptx	95	47.353	Hippocampus_comes
ENSPMAG00000008417	aptx	97	47.214	ENSIPUG00000017548	aptx	99	47.214	Ictalurus_punctatus
ENSPMAG00000008417	aptx	97	46.765	ENSSTOG00000005185	APTX	98	55.307	Ictidomys_tridecemlineatus
ENSPMAG00000008417	aptx	97	48.094	ENSJJAG00000015653	Aptx	99	48.094	Jaculus_jaculus
ENSPMAG00000008417	aptx	97	46.628	ENSKMAG00000000117	aptx	99	46.628	Kryptolebias_marmoratus
ENSPMAG00000008417	aptx	97	42.647	ENSLBEG00000021489	APTX	99	42.647	Labrus_bergylta
ENSPMAG00000008417	aptx	97	47.443	ENSLBEG00000015353	aptx	99	47.443	Labrus_bergylta
ENSPMAG00000008417	aptx	97	46.133	ENSLACG00000003376	APTX	99	46.111	Latimeria_chalumnae
ENSPMAG00000008417	aptx	98	46.893	ENSLOCG00000011556	aptx	96	46.893	Lepisosteus_oculatus
ENSPMAG00000008417	aptx	98	47.262	ENSLAFG00000005665	APTX	99	47.262	Loxodonta_africana
ENSPMAG00000008417	aptx	97	47.564	ENSMFAG00000043141	APTX	96	47.564	Macaca_fascicularis
ENSPMAG00000008417	aptx	98	47.443	ENSMMUG00000007724	APTX	96	47.039	Macaca_mulatta
ENSPMAG00000008417	aptx	98	46.356	ENSMNEG00000042341	APTX	99	47.278	Macaca_nemestrina
ENSPMAG00000008417	aptx	98	47.443	ENSMLEG00000035137	APTX	99	46.705	Mandrillus_leucophaeus
ENSPMAG00000008417	aptx	97	47.059	ENSMAMG00000018377	aptx	99	47.059	Mastacembelus_armatus
ENSPMAG00000008417	aptx	96	48.512	ENSMZEG00005022621	aptx	98	48.512	Maylandia_zebra
ENSPMAG00000008417	aptx	51	55.866	ENSMGAG00000005736	APTX	97	55.866	Meleagris_gallopavo
ENSPMAG00000008417	aptx	97	46.957	ENSMAUG00000006039	Aptx	97	55.866	Mesocricetus_auratus
ENSPMAG00000008417	aptx	98	44.886	ENSMICG00000006603	APTX	97	44.886	Microcebus_murinus
ENSPMAG00000008417	aptx	97	47.941	ENSMOCG00000000869	Aptx	99	55.307	Microtus_ochrogaster
ENSPMAG00000008417	aptx	97	48.824	ENSMMOG00000007028	aptx	99	48.824	Mola_mola
ENSPMAG00000008417	aptx	97	43.143	ENSMODG00000003365	APTX	99	43.143	Monodelphis_domestica
ENSPMAG00000008417	aptx	97	42.353	ENSMALG00000003828	aptx	99	42.353	Monopterus_albus
ENSPMAG00000008417	aptx	68	57.542	MGP_CAROLIEiJ_G0025897	-	98	57.542	Mus_caroli
ENSPMAG00000008417	aptx	97	47.059	ENSMUSG00000028411	Aptx	98	56.983	Mus_musculus
ENSPMAG00000008417	aptx	97	47.801	MGP_PahariEiJ_G0024020	Aptx	99	47.647	Mus_pahari
ENSPMAG00000008417	aptx	97	47.059	MGP_SPRETEiJ_G0026846	Aptx	96	47.059	Mus_spretus
ENSPMAG00000008417	aptx	97	47.965	ENSMPUG00000004290	APTX	99	47.965	Mustela_putorius_furo
ENSPMAG00000008417	aptx	98	47.143	ENSMLUG00000016081	APTX	95	47.143	Myotis_lucifugus
ENSPMAG00000008417	aptx	97	47.246	ENSNGAG00000016314	Aptx	98	56.425	Nannospalax_galili
ENSPMAG00000008417	aptx	97	48.529	ENSNBRG00000014199	aptx	99	48.529	Neolamprologus_brichardi
ENSPMAG00000008417	aptx	97	47.674	ENSNLEG00000032184	APTX	99	47.674	Nomascus_leucogenys
ENSPMAG00000008417	aptx	96	42.651	ENSMEUG00000004153	APTX	98	42.651	Notamacropus_eugenii
ENSPMAG00000008417	aptx	84	45.183	ENSOPRG00000012403	APTX	96	45.183	Ochotona_princeps
ENSPMAG00000008417	aptx	97	45.322	ENSODEG00000015832	-	98	54.190	Octodon_degus
ENSPMAG00000008417	aptx	64	54.190	ENSODEG00000000097	-	81	54.190	Octodon_degus
ENSPMAG00000008417	aptx	97	48.529	ENSONIG00000014541	aptx	83	48.529	Oreochromis_niloticus
ENSPMAG00000008417	aptx	83	42.258	ENSOANG00000009878	APTX	98	42.258	Ornithorhynchus_anatinus
ENSPMAG00000008417	aptx	97	46.839	ENSOCUG00000000738	-	98	46.488	Oryctolagus_cuniculus
ENSPMAG00000008417	aptx	70	54.749	ENSOCUG00000025059	-	94	54.749	Oryctolagus_cuniculus
ENSPMAG00000008417	aptx	97	49.288	ENSORLG00000006237	aptx	99	49.288	Oryzias_latipes
ENSPMAG00000008417	aptx	97	49.288	ENSORLG00020021478	aptx	99	49.288	Oryzias_latipes_hni
ENSPMAG00000008417	aptx	97	48.974	ENSORLG00015021873	aptx	99	48.974	Oryzias_latipes_hsok
ENSPMAG00000008417	aptx	99	43.626	ENSOMEG00000007875	aptx	94	43.626	Oryzias_melastigma
ENSPMAG00000008417	aptx	97	45.690	ENSOGAG00000005388	APTX	95	45.690	Otolemur_garnettii
ENSPMAG00000008417	aptx	99	46.742	ENSOARG00000009598	APTX	97	46.742	Ovis_aries
ENSPMAG00000008417	aptx	97	47.851	ENSPPAG00000030295	APTX	96	47.368	Pan_paniscus
ENSPMAG00000008417	aptx	98	48.397	ENSPPRG00000017524	APTX	99	48.406	Panthera_pardus
ENSPMAG00000008417	aptx	98	48.397	ENSPTIG00000020000	APTX	99	48.406	Panthera_tigris_altaica
ENSPMAG00000008417	aptx	98	47.230	ENSPTRG00000020850	APTX	99	47.851	Pan_troglodytes
ENSPMAG00000008417	aptx	98	47.443	ENSPANG00000025301	APTX	96	47.039	Papio_anubis
ENSPMAG00000008417	aptx	97	47.740	ENSPKIG00000013601	aptx	99	47.740	Paramormyrops_kingsleyae
ENSPMAG00000008417	aptx	97	44.023	ENSPSIG00000010521	APTX	94	44.023	Pelodiscus_sinensis
ENSPMAG00000008417	aptx	96	45.349	ENSPMGG00000018649	aptx	99	45.349	Periophthalmus_magnuspinnatus
ENSPMAG00000008417	aptx	97	47.977	ENSPEMG00000007747	Aptx	98	56.983	Peromyscus_maniculatus_bairdii
ENSPMAG00000008417	aptx	97	45.739	ENSPCIG00000029852	APTX	99	45.739	Phascolarctos_cinereus
ENSPMAG00000008417	aptx	97	47.647	ENSPFOG00000005131	-	99	47.647	Poecilia_formosa
ENSPMAG00000008417	aptx	97	47.647	ENSPFOG00000004992	aptx	99	47.647	Poecilia_formosa
ENSPMAG00000008417	aptx	97	47.647	ENSPLAG00000007906	aptx	99	47.647	Poecilia_latipinna
ENSPMAG00000008417	aptx	97	47.647	ENSPLAG00000007960	APTX	99	47.647	Poecilia_latipinna
ENSPMAG00000008417	aptx	97	47.647	ENSPMEG00000019789	APTX	99	47.647	Poecilia_mexicana
ENSPMAG00000008417	aptx	97	47.647	ENSPMEG00000018504	aptx	99	47.647	Poecilia_mexicana
ENSPMAG00000008417	aptx	97	46.471	ENSPREG00000004375	aptx	99	46.471	Poecilia_reticulata
ENSPMAG00000008417	aptx	98	47.550	ENSPPYG00000019142	APTX	96	47.550	Pongo_abelii
ENSPMAG00000008417	aptx	97	40.113	ENSPCAG00000010014	APTX	99	40.113	Procavia_capensis
ENSPMAG00000008417	aptx	97	47.093	ENSPCOG00000016780	APTX	99	47.093	Propithecus_coquereli
ENSPMAG00000008417	aptx	99	46.307	ENSPVAG00000011468	APTX	98	46.307	Pteropus_vampyrus
ENSPMAG00000008417	aptx	97	48.529	ENSPNYG00000007675	aptx	99	48.529	Pundamilia_nyererei
ENSPMAG00000008417	aptx	97	46.857	ENSPNAG00000015984	aptx	99	46.857	Pygocentrus_nattereri
ENSPMAG00000008417	aptx	97	48.538	ENSRNOG00000006582	Aptx	99	48.538	Rattus_norvegicus
ENSPMAG00000008417	aptx	98	47.159	ENSRBIG00000042913	APTX	99	47.278	Rhinopithecus_bieti
ENSPMAG00000008417	aptx	98	46.647	ENSRROG00000035395	APTX	99	47.278	Rhinopithecus_roxellana
ENSPMAG00000008417	aptx	97	46.647	ENSSBOG00000025215	APTX	99	46.647	Saimiri_boliviensis_boliviensis
ENSPMAG00000008417	aptx	97	45.748	ENSSHAG00000012205	APTX	94	45.748	Sarcophilus_harrisii
ENSPMAG00000008417	aptx	97	49.435	ENSSFOG00015009267	aptx	99	49.435	Scleropages_formosus
ENSPMAG00000008417	aptx	97	48.529	ENSSMAG00000008839	aptx	99	48.529	Scophthalmus_maximus
ENSPMAG00000008417	aptx	97	46.765	ENSSDUG00000001989	aptx	99	46.765	Seriola_dumerili
ENSPMAG00000008417	aptx	97	46.765	ENSSLDG00000004915	aptx	99	46.765	Seriola_lalandi_dorsalis
ENSPMAG00000008417	aptx	97	44.915	ENSSPUG00000008994	APTX	86	44.915	Sphenodon_punctatus
ENSPMAG00000008417	aptx	97	47.801	ENSSPAG00000020373	aptx	99	47.801	Stegastes_partitus
ENSPMAG00000008417	aptx	97	47.384	ENSSSCG00000011001	APTX	99	47.384	Sus_scrofa
ENSPMAG00000008417	aptx	97	44.413	ENSTGUG00000001441	APTX	99	44.413	Taeniopygia_guttata
ENSPMAG00000008417	aptx	97	46.064	ENSTRUG00000009794	aptx	99	46.064	Takifugu_rubripes
ENSPMAG00000008417	aptx	97	46.064	ENSTNIG00000010570	aptx	98	46.064	Tetraodon_nigroviridis
ENSPMAG00000008417	aptx	99	44.759	ENSTBEG00000008504	APTX	98	44.759	Tupaia_belangeri
ENSPMAG00000008417	aptx	94	42.090	ENSTTRG00000007384	APTX	98	42.090	Tursiops_truncatus
ENSPMAG00000008417	aptx	99	45.915	ENSUAMG00000003700	APTX	99	45.000	Ursus_americanus
ENSPMAG00000008417	aptx	97	46.418	ENSUMAG00000005837	APTX	99	46.418	Ursus_maritimus
ENSPMAG00000008417	aptx	78	54.348	ENSVPAG00000001297	APTX	79	54.348	Vicugna_pacos
ENSPMAG00000008417	aptx	97	47.278	ENSVVUG00000021130	APTX	99	47.278	Vulpes_vulpes
ENSPMAG00000008417	aptx	97	45.690	ENSXETG00000024143	aptx	99	45.977	Xenopus_tropicalis
ENSPMAG00000008417	aptx	97	45.810	ENSXCOG00000005020	aptx	99	45.810	Xiphophorus_couchianus
ENSPMAG00000008417	aptx	97	48.837	ENSXMAG00000022086	aptx	96	48.837	Xiphophorus_maculatus