EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000008479 (Gene tree)
Gene ID: -
Gene Symbol: ddb1
Alias: -
Full Name: damage-specific DNA binding protein 1
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Plus strand
Length: 20777 bases
Position: chrGL479094:989-21765
Accession: ZDB-GENE-040426-1272
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000009366	CPSF_A	PF03178.15	2.3e-67	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000009406	-	3054	-	ENSPMAP00000009366	1018 (aa)	-	S4RVX6

Gene Model

Click here to download ENSPMAG00000008479's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000008479's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000008479	ddb1	100	86.739	ENSG00000167986	DDB1	100	89.091	Homo_sapiens
ENSPMAG00000008479	ddb1	100	86.837	ENSAPOG00000005036	ddb1	98	86.458	Acanthochromis_polyacanthus
ENSPMAG00000008479	ddb1	100	86.837	ENSAMEG00000016518	DDB1	89	86.837	Ailuropoda_melanoleuca
ENSPMAG00000008479	ddb1	94	86.042	ENSACIG00000020624	ddb1	98	86.042	Amphilophus_citrinellus
ENSPMAG00000008479	ddb1	100	86.640	ENSAOCG00000003066	ddb1	89	86.640	Amphiprion_ocellaris
ENSPMAG00000008479	ddb1	100	86.640	ENSAPEG00000000092	ddb1	94	86.640	Amphiprion_percula
ENSPMAG00000008479	ddb1	100	86.739	ENSATEG00000020571	ddb1	98	82.280	Anabas_testudineus
ENSPMAG00000008479	ddb1	100	86.149	ENSAPLG00000007174	DDB1	89	86.149	Anas_platyrhynchos
ENSPMAG00000008479	ddb1	100	86.346	ENSACAG00000017758	DDB1	89	86.346	Anolis_carolinensis
ENSPMAG00000008479	ddb1	100	86.739	ENSANAG00000021878	DDB1	89	86.739	Aotus_nancymaae
ENSPMAG00000008479	ddb1	100	86.444	ENSACLG00000012401	ddb1	97	84.897	Astatotilapia_calliptera
ENSPMAG00000008479	ddb1	100	86.739	ENSBTAG00000021569	DDB1	83	86.739	Bos_taurus
ENSPMAG00000008479	ddb1	100	37.812	WBGene00010890	ddb-1	89	37.812	Caenorhabditis_elegans
ENSPMAG00000008479	ddb1	100	86.739	ENSCJAG00000019319	DDB1	89	86.739	Callithrix_jacchus
ENSPMAG00000008479	ddb1	100	86.837	ENSCAFG00000016264	DDB1	94	86.837	Canis_familiaris
ENSPMAG00000008479	ddb1	100	86.837	ENSCAFG00020012722	DDB1	94	86.837	Canis_lupus_dingo
ENSPMAG00000008479	ddb1	100	86.739	ENSCHIG00000014969	DDB1	89	86.739	Capra_hircus
ENSPMAG00000008479	ddb1	100	86.739	ENSTSYG00000008027	DDB1	89	86.739	Carlito_syrichta
ENSPMAG00000008479	ddb1	99	86.824	ENSCAPG00000010786	DDB1	91	86.824	Cavia_aperea
ENSPMAG00000008479	ddb1	100	86.837	ENSCPOG00000009956	DDB1	89	86.837	Cavia_porcellus
ENSPMAG00000008479	ddb1	100	86.739	ENSCCAG00000035883	DDB1	89	86.739	Cebus_capucinus
ENSPMAG00000008479	ddb1	100	84.563	ENSCATG00000044495	DDB1	90	84.563	Cercocebus_atys
ENSPMAG00000008479	ddb1	100	86.837	ENSCLAG00000004126	DDB1	89	86.837	Chinchilla_lanigera
ENSPMAG00000008479	ddb1	100	86.739	ENSCSAG00000006392	DDB1	89	86.739	Chlorocebus_sabaeus
ENSPMAG00000008479	ddb1	89	80.353	ENSCHOG00000011377	DDB1	81	80.353	Choloepus_hoffmanni
ENSPMAG00000008479	ddb1	100	86.248	ENSCPBG00000017728	DDB1	89	86.248	Chrysemys_picta_bellii
ENSPMAG00000008479	ddb1	100	61.068	ENSCING00000007437	-	89	61.068	Ciona_intestinalis
ENSPMAG00000008479	ddb1	95	60.427	ENSCSAVG00000004783	-	100	58.977	Ciona_savignyi
ENSPMAG00000008479	ddb1	100	86.739	ENSCANG00000019948	DDB1	89	86.739	Colobus_angolensis_palliatus
ENSPMAG00000008479	ddb1	100	86.837	ENSCGRG00001016599	Ddb1	94	85.825	Cricetulus_griseus_chok1gshd
ENSPMAG00000008479	ddb1	100	86.837	ENSCGRG00000013427	Ddb1	89	86.837	Cricetulus_griseus_crigri
ENSPMAG00000008479	ddb1	100	86.444	ENSCSEG00000012499	ddb1	98	84.607	Cynoglossus_semilaevis
ENSPMAG00000008479	ddb1	100	86.640	ENSCVAG00000019531	ddb1	94	86.640	Cyprinodon_variegatus
ENSPMAG00000008479	ddb1	100	82.924	ENSDARG00000074431	ddb1	89	82.924	Danio_rerio
ENSPMAG00000008479	ddb1	100	86.935	ENSDNOG00000014884	DDB1	92	86.935	Dasypus_novemcinctus
ENSPMAG00000008479	ddb1	83	90.000	ENSDORG00000000127	Ddb1	87	88.350	Dipodomys_ordii
ENSPMAG00000008479	ddb1	100	60.372	FBgn0260962	pic	89	60.372	Drosophila_melanogaster
ENSPMAG00000008479	ddb1	62	88.462	ENSETEG00000001053	-	55	88.462	Echinops_telfairi
ENSPMAG00000008479	ddb1	85	85.731	ENSEBUG00000014593	ddb1	95	85.731	Eptatretus_burgeri
ENSPMAG00000008479	ddb1	100	86.935	ENSEASG00005008184	DDB1	89	86.935	Equus_asinus_asinus
ENSPMAG00000008479	ddb1	100	86.935	ENSECAG00000012136	DDB1	89	86.935	Equus_caballus
ENSPMAG00000008479	ddb1	86	83.099	ENSEEUG00000003194	DDB1	76	83.099	Erinaceus_europaeus
ENSPMAG00000008479	ddb1	100	85.953	ENSELUG00000023868	ddb1	89	85.953	Esox_lucius
ENSPMAG00000008479	ddb1	100	86.837	ENSFCAG00000029716	DDB1	89	86.837	Felis_catus
ENSPMAG00000008479	ddb1	99	86.627	ENSFALG00000011981	DDB1	89	86.640	Ficedula_albicollis
ENSPMAG00000008479	ddb1	100	86.935	ENSFDAG00000005128	DDB1	89	86.935	Fukomys_damarensis
ENSPMAG00000008479	ddb1	89	92.810	ENSFHEG00000022133	ddb1	88	92.810	Fundulus_heteroclitus
ENSPMAG00000008479	ddb1	85	86.957	ENSGMOG00000019386	ddb1	90	86.957	Gadus_morhua
ENSPMAG00000008479	ddb1	100	86.739	ENSGALG00000042333	DDB1	89	86.739	Gallus_gallus
ENSPMAG00000008479	ddb1	100	86.935	ENSGAFG00000013142	ddb1	94	86.935	Gambusia_affinis
ENSPMAG00000008479	ddb1	100	86.346	ENSGACG00000017182	ddb1	93	86.346	Gasterosteus_aculeatus
ENSPMAG00000008479	ddb1	96	86.049	ENSGAGG00000014124	DDB1	91	86.049	Gopherus_agassizii
ENSPMAG00000008479	ddb1	100	86.739	ENSGGOG00000004052	DDB1	89	86.739	Gorilla_gorilla
ENSPMAG00000008479	ddb1	100	86.444	ENSHBUG00000008873	ddb1	91	86.151	Haplochromis_burtoni
ENSPMAG00000008479	ddb1	100	86.542	ENSHGLG00000018430	DDB1	89	86.542	Heterocephalus_glaber_female
ENSPMAG00000008479	ddb1	100	85.363	ENSHGLG00100014475	DDB1	89	85.363	Heterocephalus_glaber_male
ENSPMAG00000008479	ddb1	100	86.248	ENSHCOG00000018670	ddb1	93	86.248	Hippocampus_comes
ENSPMAG00000008479	ddb1	100	86.346	ENSIPUG00000005612	DDB1	92	86.346	Ictalurus_punctatus
ENSPMAG00000008479	ddb1	100	86.935	ENSSTOG00000007552	DDB1	89	86.935	Ictidomys_tridecemlineatus
ENSPMAG00000008479	ddb1	100	86.739	ENSJJAG00000017769	Ddb1	89	86.739	Jaculus_jaculus
ENSPMAG00000008479	ddb1	100	86.837	ENSKMAG00000002315	ddb1	95	86.837	Kryptolebias_marmoratus
ENSPMAG00000008479	ddb1	94	86.250	ENSLBEG00000017065	ddb1	99	86.250	Labrus_bergylta
ENSPMAG00000008479	ddb1	100	86.640	ENSLACG00000017611	DDB1	93	86.640	Latimeria_chalumnae
ENSPMAG00000008479	ddb1	91	79.390	ENSLOCG00000000012	ddb1	88	79.390	Lepisosteus_oculatus
ENSPMAG00000008479	ddb1	100	86.640	ENSLAFG00000011513	DDB1	89	86.640	Loxodonta_africana
ENSPMAG00000008479	ddb1	100	86.739	ENSMFAG00000042035	DDB1	89	86.739	Macaca_fascicularis
ENSPMAG00000008479	ddb1	100	86.739	ENSMMUG00000002691	DDB1	88	90.196	Macaca_mulatta
ENSPMAG00000008479	ddb1	100	86.739	ENSMNEG00000031559	DDB1	89	86.739	Macaca_nemestrina
ENSPMAG00000008479	ddb1	100	86.739	ENSMLEG00000044136	DDB1	93	85.146	Mandrillus_leucophaeus
ENSPMAG00000008479	ddb1	100	86.837	ENSMAMG00000014372	ddb1	89	86.837	Mastacembelus_armatus
ENSPMAG00000008479	ddb1	100	86.444	ENSMZEG00005013835	ddb1	89	86.444	Maylandia_zebra
ENSPMAG00000008479	ddb1	95	86.481	ENSMGAG00000004990	DDB1	90	86.481	Meleagris_gallopavo
ENSPMAG00000008479	ddb1	100	86.837	ENSMAUG00000012926	Ddb1	89	86.837	Mesocricetus_auratus
ENSPMAG00000008479	ddb1	100	86.739	ENSMICG00000013703	DDB1	89	86.739	Microcebus_murinus
ENSPMAG00000008479	ddb1	100	86.739	ENSMOCG00000020499	Ddb1	89	86.739	Microtus_ochrogaster
ENSPMAG00000008479	ddb1	94	86.354	ENSMMOG00000001758	ddb1	98	86.354	Mola_mola
ENSPMAG00000008479	ddb1	100	78.180	ENSMODG00000020353	DDB1	88	78.333	Monodelphis_domestica
ENSPMAG00000008479	ddb1	100	86.739	ENSMALG00000014071	ddb1	89	86.739	Monopterus_albus
ENSPMAG00000008479	ddb1	100	86.837	MGP_CAROLIEiJ_G0022695	Ddb1	89	86.837	Mus_caroli
ENSPMAG00000008479	ddb1	100	86.837	ENSMUSG00000024740	Ddb1	89	86.837	Mus_musculus
ENSPMAG00000008479	ddb1	100	86.837	MGP_PahariEiJ_G0014189	Ddb1	89	86.837	Mus_pahari
ENSPMAG00000008479	ddb1	100	86.837	MGP_SPRETEiJ_G0023609	Ddb1	89	86.837	Mus_spretus
ENSPMAG00000008479	ddb1	100	83.694	ENSMPUG00000014200	DDB1	89	83.694	Mustela_putorius_furo
ENSPMAG00000008479	ddb1	100	87.132	ENSMLUG00000013232	DDB1	89	87.132	Myotis_lucifugus
ENSPMAG00000008479	ddb1	100	86.542	ENSNGAG00000009384	Ddb1	89	86.542	Nannospalax_galili
ENSPMAG00000008479	ddb1	100	86.542	ENSNBRG00000019581	ddb1	89	86.542	Neolamprologus_brichardi
ENSPMAG00000008479	ddb1	100	83.981	ENSNLEG00000002022	DDB1	90	83.981	Nomascus_leucogenys
ENSPMAG00000008479	ddb1	91	94.505	ENSMEUG00000001099	DDB1	84	94.505	Notamacropus_eugenii
ENSPMAG00000008479	ddb1	86	83.238	ENSOPRG00000008254	DDB1	76	83.238	Ochotona_princeps
ENSPMAG00000008479	ddb1	100	87.033	ENSODEG00000002419	DDB1	89	87.033	Octodon_degus
ENSPMAG00000008479	ddb1	100	86.444	ENSONIG00000005804	ddb1	89	86.444	Oreochromis_niloticus
ENSPMAG00000008479	ddb1	91	86.237	ENSOANG00000004897	DDB1	90	86.237	Ornithorhynchus_anatinus
ENSPMAG00000008479	ddb1	100	86.837	ENSOCUG00000001667	DDB1	89	86.837	Oryctolagus_cuniculus
ENSPMAG00000008479	ddb1	100	86.444	ENSORLG00000001399	ddb1	96	86.444	Oryzias_latipes
ENSPMAG00000008479	ddb1	100	86.346	ENSORLG00020001277	ddb1	90	86.346	Oryzias_latipes_hni
ENSPMAG00000008479	ddb1	100	86.444	ENSORLG00015002080	ddb1	93	86.444	Oryzias_latipes_hsok
ENSPMAG00000008479	ddb1	100	86.837	ENSOMEG00000006181	ddb1	92	86.837	Oryzias_melastigma
ENSPMAG00000008479	ddb1	100	86.739	ENSOGAG00000016103	DDB1	89	86.739	Otolemur_garnettii
ENSPMAG00000008479	ddb1	100	86.739	ENSOARG00000011716	DDB1	88	86.739	Ovis_aries
ENSPMAG00000008479	ddb1	100	86.739	ENSPPAG00000035343	DDB1	89	86.739	Pan_paniscus
ENSPMAG00000008479	ddb1	100	86.837	ENSPPRG00000013300	DDB1	89	86.837	Panthera_pardus
ENSPMAG00000008479	ddb1	99	86.824	ENSPTIG00000006909	DDB1	89	86.824	Panthera_tigris_altaica
ENSPMAG00000008479	ddb1	100	86.739	ENSPTRG00000003737	DDB1	89	86.739	Pan_troglodytes
ENSPMAG00000008479	ddb1	100	86.739	ENSPANG00000000242	DDB1	89	86.739	Papio_anubis
ENSPMAG00000008479	ddb1	100	87.132	ENSPKIG00000019213	ddb1	89	87.132	Paramormyrops_kingsleyae
ENSPMAG00000008479	ddb1	100	86.176	ENSPSIG00000013275	DDB1	91	86.176	Pelodiscus_sinensis
ENSPMAG00000008479	ddb1	94	86.458	ENSPMGG00000021179	ddb1	98	86.458	Periophthalmus_magnuspinnatus
ENSPMAG00000008479	ddb1	100	86.837	ENSPEMG00000012241	Ddb1	89	86.837	Peromyscus_maniculatus_bairdii
ENSPMAG00000008479	ddb1	100	86.739	ENSPCIG00000002643	DDB1	89	86.739	Phascolarctos_cinereus
ENSPMAG00000008479	ddb1	100	87.033	ENSPFOG00000002768	ddb1	89	87.033	Poecilia_formosa
ENSPMAG00000008479	ddb1	100	87.033	ENSPLAG00000017227	ddb1	93	87.033	Poecilia_latipinna
ENSPMAG00000008479	ddb1	100	87.033	ENSPMEG00000011398	ddb1	93	87.033	Poecilia_mexicana
ENSPMAG00000008479	ddb1	100	87.033	ENSPREG00000004440	ddb1	92	87.033	Poecilia_reticulata
ENSPMAG00000008479	ddb1	100	82.745	ENSPPYG00000003193	DDB1	89	82.745	Pongo_abelii
ENSPMAG00000008479	ddb1	83	85.035	ENSPCAG00000011040	DDB1	74	85.035	Procavia_capensis
ENSPMAG00000008479	ddb1	100	86.275	ENSPCOG00000015176	DDB1	89	86.275	Propithecus_coquereli
ENSPMAG00000008479	ddb1	100	86.640	ENSPVAG00000003847	DDB1	89	86.640	Pteropus_vampyrus
ENSPMAG00000008479	ddb1	100	86.837	ENSPNAG00000006635	ddb1	92	86.837	Pygocentrus_nattereri
ENSPMAG00000008479	ddb1	100	86.739	ENSRNOG00000020715	Ddb1	89	86.739	Rattus_norvegicus
ENSPMAG00000008479	ddb1	100	86.739	ENSRBIG00000033611	DDB1	90	86.739	Rhinopithecus_bieti
ENSPMAG00000008479	ddb1	100	86.739	ENSRROG00000041407	DDB1	89	86.739	Rhinopithecus_roxellana
ENSPMAG00000008479	ddb1	100	86.837	ENSSBOG00000019775	DDB1	89	86.837	Saimiri_boliviensis_boliviensis
ENSPMAG00000008479	ddb1	95	84.917	ENSSHAG00000011600	DDB1	90	84.917	Sarcophilus_harrisii
ENSPMAG00000008479	ddb1	100	86.935	ENSSFOG00015011151	ddb1	92	86.935	Scleropages_formosus
ENSPMAG00000008479	ddb1	100	86.640	ENSSMAG00000009495	ddb1	89	86.640	Scophthalmus_maximus
ENSPMAG00000008479	ddb1	100	86.640	ENSSDUG00000004642	ddb1	89	86.640	Seriola_dumerili
ENSPMAG00000008479	ddb1	100	86.640	ENSSLDG00000015804	ddb1	89	86.640	Seriola_lalandi_dorsalis
ENSPMAG00000008479	ddb1	65	90.265	ENSSARG00000003290	-	61	90.265	Sorex_araneus
ENSPMAG00000008479	ddb1	100	86.542	ENSSPUG00000019338	DDB1	89	86.542	Sphenodon_punctatus
ENSPMAG00000008479	ddb1	100	86.739	ENSSPAG00000009888	ddb1	98	83.871	Stegastes_partitus
ENSPMAG00000008479	ddb1	100	86.248	ENSSSCG00000013094	DDB1	90	86.248	Sus_scrofa
ENSPMAG00000008479	ddb1	100	86.739	ENSTGUG00000006414	DDB1	89	86.739	Taeniopygia_guttata
ENSPMAG00000008479	ddb1	100	85.855	ENSTRUG00000016682	ddb1	98	82.830	Takifugu_rubripes
ENSPMAG00000008479	ddb1	88	80.178	ENSTNIG00000009565	ddb1	90	80.178	Tetraodon_nigroviridis
ENSPMAG00000008479	ddb1	93	82.229	ENSTTRG00000011055	DDB1	85	82.229	Tursiops_truncatus
ENSPMAG00000008479	ddb1	100	86.837	ENSUAMG00000017793	DDB1	88	86.837	Ursus_americanus
ENSPMAG00000008479	ddb1	100	86.837	ENSUMAG00000011788	DDB1	93	86.837	Ursus_maritimus
ENSPMAG00000008479	ddb1	91	81.690	ENSVPAG00000007963	DDB1	82	81.690	Vicugna_pacos
ENSPMAG00000008479	ddb1	100	86.935	ENSVVUG00000004987	DDB1	89	86.935	Vulpes_vulpes
ENSPMAG00000008479	ddb1	100	83.953	ENSXETG00000008820	ddb1	89	83.953	Xenopus_tropicalis
ENSPMAG00000008479	ddb1	94	86.458	ENSXCOG00000013956	ddb1	98	86.458	Xiphophorus_couchianus
ENSPMAG00000008479	ddb1	100	86.837	ENSXMAG00000000022	ddb1	94	86.837	Xiphophorus_maculatus