EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000008502 (Gene tree)
Gene ID: -
Gene Symbol: snrnp70
Alias: -
Full Name: small nuclear ribonucleoprotein 70 (U1)
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 7062 bases
Position: chrGL477012:371-7432
Accession: ZDB-GENE-040825-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000009359	RRM_1	PF00076.22	2.1e-18	1	1
ENSPMAP00000009358	RRM_1	PF00076.22	3.4e-18	1	1
ENSPMAP00000009358	U1snRNP70_N	PF12220.8	8.9e-27	1	1
ENSPMAP00000009359	U1snRNP70_N	PF12220.8	1.4e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000009399	-	576	-	ENSPMAP00000009359	192 (aa)	-	S4RVW9
ENSPMAT00000009398	-	579	-	ENSPMAP00000009358	193 (aa)	-	S4RVW8

Gene Model

Click here to download ENSPMAG00000008502's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000008502's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000008502	snrnp70	97	83.422	ENSG00000104852	SNRNP70	99	79.878	Homo_sapiens
ENSPMAG00000008502	snrnp70	74	75.352	ENSAPOG00000009322	snrnp70	89	75.352	Acanthochromis_polyacanthus
ENSPMAG00000008502	snrnp70	97	83.422	ENSANAG00000036787	SNRNP70	99	79.878	Aotus_nancymaae
ENSPMAG00000008502	snrnp70	85	79.878	ENSBTAG00000048800	-	99	79.878	Bos_taurus
ENSPMAG00000008502	snrnp70	100	54.639	WBGene00004390	rnp-7	58	54.639	Caenorhabditis_elegans
ENSPMAG00000008502	snrnp70	97	83.422	ENSCJAG00000000193	SNRNP70	99	79.878	Callithrix_jacchus
ENSPMAG00000008502	snrnp70	97	83.422	ENSCAFG00000003711	SNRNP70	99	79.878	Canis_familiaris
ENSPMAG00000008502	snrnp70	97	80.423	ENSCAFG00020025470	SNRNP70	99	76.506	Canis_lupus_dingo
ENSPMAG00000008502	snrnp70	85	79.878	ENSCHIG00000018534	-	99	79.878	Capra_hircus
ENSPMAG00000008502	snrnp70	54	71.429	ENSTSYG00000032350	-	85	71.429	Carlito_syrichta
ENSPMAG00000008502	snrnp70	100	71.134	ENSCSAVG00000010109	-	51	71.134	Ciona_savignyi
ENSPMAG00000008502	snrnp70	97	83.422	ENSCANG00000036607	SNRNP70	78	83.938	Colobus_angolensis_palliatus
ENSPMAG00000008502	snrnp70	98	80.423	ENSCSEG00000011978	snrnp70	85	80.829	Cynoglossus_semilaevis
ENSPMAG00000008502	snrnp70	82	79.245	ENSCVAG00000003912	snrnp70	99	79.245	Cyprinodon_variegatus
ENSPMAG00000008502	snrnp70	97	81.283	ENSDARG00000077126	snrnp70	99	79.503	Danio_rerio
ENSPMAG00000008502	snrnp70	85	79.878	ENSDNOG00000035849	-	99	79.878	Dasypus_novemcinctus
ENSPMAG00000008502	snrnp70	85	79.878	ENSECAG00000013936	-	99	79.878	Equus_caballus
ENSPMAG00000008502	snrnp70	97	83.422	ENSFDAG00000013830	SNRNP70	73	90.323	Fukomys_damarensis
ENSPMAG00000008502	snrnp70	98	79.894	ENSGMOG00000011492	snrnp70	85	80.311	Gadus_morhua
ENSPMAG00000008502	snrnp70	98	80.423	ENSGACG00000000448	snrnp70	61	80.829	Gasterosteus_aculeatus
ENSPMAG00000008502	snrnp70	82	66.154	ENSGAGG00000012628	SNRNP70	99	65.641	Gopherus_agassizii
ENSPMAG00000008502	snrnp70	97	83.422	ENSGGOG00000008245	SNRNP70	99	79.878	Gorilla_gorilla
ENSPMAG00000008502	snrnp70	85	79.878	ENSHGLG00100001651	-	99	79.878	Heterocephalus_glaber_male
ENSPMAG00000008502	snrnp70	85	79.878	ENSSTOG00000013988	-	99	79.878	Ictidomys_tridecemlineatus
ENSPMAG00000008502	snrnp70	97	83.422	ENSLAFG00000028536	SNRNP70	84	83.938	Loxodonta_africana
ENSPMAG00000008502	snrnp70	97	83.422	ENSMMUG00000004928	SNRNP70	99	79.878	Macaca_mulatta
ENSPMAG00000008502	snrnp70	97	83.422	ENSMICG00000038437	SNRNP70	99	79.878	Microcebus_murinus
ENSPMAG00000008502	snrnp70	97	83.422	MGP_CAROLIEiJ_G0029714	Snrnp70	100	79.817	Mus_caroli
ENSPMAG00000008502	snrnp70	97	83.422	ENSMUSG00000063511	Snrnp70	100	79.817	Mus_musculus
ENSPMAG00000008502	snrnp70	97	83.422	MGP_PahariEiJ_G0012939	Snrnp70	100	79.817	Mus_pahari
ENSPMAG00000008502	snrnp70	97	83.422	MGP_SPRETEiJ_G0030812	Snrnp70	100	79.817	Mus_spretus
ENSPMAG00000008502	snrnp70	97	83.422	ENSNGAG00000021191	Snrnp70	73	90.323	Nannospalax_galili
ENSPMAG00000008502	snrnp70	97	81.818	ENSNBRG00000003126	snrnp70	83	82.383	Neolamprologus_brichardi
ENSPMAG00000008502	snrnp70	96	82.065	ENSNLEG00000004899	SNRNP70	75	83.957	Nomascus_leucogenys
ENSPMAG00000008502	snrnp70	97	83.422	ENSOANG00000005213	SNRNP70	84	83.938	Ornithorhynchus_anatinus
ENSPMAG00000008502	snrnp70	97	83.422	ENSOARG00000012608	SNRNP70	52	83.938	Ovis_aries
ENSPMAG00000008502	snrnp70	97	83.422	ENSPPAG00000035067	SNRNP70	99	79.878	Pan_paniscus
ENSPMAG00000008502	snrnp70	97	83.422	ENSPTRG00000011277	SNRNP70	99	79.878	Pan_troglodytes
ENSPMAG00000008502	snrnp70	84	70.370	ENSPKIG00000019992	snrnp70	86	70.370	Paramormyrops_kingsleyae
ENSPMAG00000008502	snrnp70	92	75.281	ENSPSIG00000015251	SNRNP70	67	78.107	Pelodiscus_sinensis
ENSPMAG00000008502	snrnp70	83	78.261	ENSPMGG00000010153	snrnp70	77	78.261	Periophthalmus_magnuspinnatus
ENSPMAG00000008502	snrnp70	97	75.936	ENSPCOG00000023103	SNRNP70	68	76.684	Propithecus_coquereli
ENSPMAG00000008502	snrnp70	97	83.422	ENSRBIG00000042387	SNRNP70	71	83.938	Rhinopithecus_bieti
ENSPMAG00000008502	snrnp70	97	83.422	ENSRROG00000033636	SNRNP70	71	83.938	Rhinopithecus_roxellana
ENSPMAG00000008502	snrnp70	97	83.422	ENSSBOG00000020026	SNRNP70	99	79.878	Saimiri_boliviensis_boliviensis
ENSPMAG00000008502	snrnp70	85	79.878	ENSSSCG00000023792	-	99	79.878	Sus_scrofa
ENSPMAG00000008502	snrnp70	57	75.455	ENSTNIG00000014186	-	99	75.455	Tetraodon_nigroviridis
ENSPMAG00000008502	snrnp70	97	83.422	ENSUMAG00000001467	SNRNP70	99	79.878	Ursus_maritimus
ENSPMAG00000008502	snrnp70	97	67.914	ENSVPAG00000005959	-	87	67.358	Vicugna_pacos
ENSPMAG00000008502	snrnp70	97	83.422	ENSVVUG00000022976	SNRNP70	99	79.878	Vulpes_vulpes