EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000008620 (Gene tree)
Gene ID: -
Gene Symbol: dbr1
Alias: -
Full Name: debranching RNA lariats 1
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Plus strand
Length: 7501 bases
Position: chrGL483042:8093-15593
Accession: ZDB-GENE-030131-2466
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000009494	DBR1	PF05011.13	3.1e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000009534	-	1172	-	ENSPMAP00000009494	379 (aa)	-	S4RWA4

Gene Model

Click here to download ENSPMAG00000008620's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000008620's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000008620	dbr1	100	61.053	ENSG00000138231	DBR1	94	74.775	Homo_sapiens
ENSPMAG00000008620	dbr1	99	60.582	ENSAPOG00000004318	dbr1	69	60.582	Acanthochromis_polyacanthus
ENSPMAG00000008620	dbr1	99	60.477	ENSAMEG00000006272	DBR1	70	60.477	Ailuropoda_melanoleuca
ENSPMAG00000008620	dbr1	99	60.582	ENSACIG00000020512	dbr1	68	60.582	Amphilophus_citrinellus
ENSPMAG00000008620	dbr1	99	60.317	ENSAOCG00000008060	dbr1	69	60.317	Amphiprion_ocellaris
ENSPMAG00000008620	dbr1	99	60.317	ENSAPEG00000021944	dbr1	69	60.317	Amphiprion_percula
ENSPMAG00000008620	dbr1	99	60.847	ENSATEG00000019673	dbr1	70	60.847	Anabas_testudineus
ENSPMAG00000008620	dbr1	100	58.793	ENSACAG00000016760	DBR1	70	58.793	Anolis_carolinensis
ENSPMAG00000008620	dbr1	100	61.053	ENSANAG00000028952	DBR1	70	61.053	Aotus_nancymaae
ENSPMAG00000008620	dbr1	99	60.053	ENSACLG00000024027	dbr1	72	60.053	Astatotilapia_calliptera
ENSPMAG00000008620	dbr1	99	62.434	ENSAMXG00000030736	dbr1	66	62.434	Astyanax_mexicanus
ENSPMAG00000008620	dbr1	100	62.105	ENSBTAG00000019949	DBR1	70	62.105	Bos_taurus
ENSPMAG00000008620	dbr1	100	41.310	WBGene00000937	dbr-1	78	41.310	Caenorhabditis_elegans
ENSPMAG00000008620	dbr1	100	60.526	ENSCJAG00000002433	DBR1	70	60.526	Callithrix_jacchus
ENSPMAG00000008620	dbr1	100	61.316	ENSCAFG00000007501	DBR1	70	61.316	Canis_familiaris
ENSPMAG00000008620	dbr1	100	61.316	ENSCAFG00020008060	DBR1	70	61.316	Canis_lupus_dingo
ENSPMAG00000008620	dbr1	100	61.579	ENSCHIG00000026937	DBR1	70	61.579	Capra_hircus
ENSPMAG00000008620	dbr1	100	60.526	ENSTSYG00000005317	DBR1	69	60.526	Carlito_syrichta
ENSPMAG00000008620	dbr1	100	58.158	ENSCPOG00000006179	DBR1	70	58.158	Cavia_porcellus
ENSPMAG00000008620	dbr1	100	61.316	ENSCCAG00000025708	DBR1	70	61.316	Cebus_capucinus
ENSPMAG00000008620	dbr1	100	61.053	ENSCATG00000032054	DBR1	70	61.053	Cercocebus_atys
ENSPMAG00000008620	dbr1	100	61.053	ENSCLAG00000001800	DBR1	70	61.053	Chinchilla_lanigera
ENSPMAG00000008620	dbr1	100	60.789	ENSCSAG00000010977	DBR1	70	60.789	Chlorocebus_sabaeus
ENSPMAG00000008620	dbr1	85	66.667	ENSCHOG00000000730	DBR1	59	66.667	Choloepus_hoffmanni
ENSPMAG00000008620	dbr1	100	60.263	ENSCPBG00000007633	DBR1	64	60.263	Chrysemys_picta_bellii
ENSPMAG00000008620	dbr1	99	50.900	ENSCING00000011388	-	87	50.900	Ciona_intestinalis
ENSPMAG00000008620	dbr1	99	51.571	ENSCSAVG00000007545	-	100	51.571	Ciona_savignyi
ENSPMAG00000008620	dbr1	100	61.053	ENSCANG00000024237	DBR1	70	61.053	Colobus_angolensis_palliatus
ENSPMAG00000008620	dbr1	100	61.579	ENSCGRG00001018497	Dbr1	70	61.579	Cricetulus_griseus_chok1gshd
ENSPMAG00000008620	dbr1	100	55.263	ENSCGRG00000005958	Dbr1	68	55.263	Cricetulus_griseus_crigri
ENSPMAG00000008620	dbr1	99	57.672	ENSCSEG00000002813	dbr1	67	57.672	Cynoglossus_semilaevis
ENSPMAG00000008620	dbr1	99	60.317	ENSCVAG00000019969	dbr1	68	60.317	Cyprinodon_variegatus
ENSPMAG00000008620	dbr1	99	60.053	ENSDARG00000056923	dbr1	66	60.053	Danio_rerio
ENSPMAG00000008620	dbr1	100	61.579	ENSDNOG00000043630	DBR1	70	61.579	Dasypus_novemcinctus
ENSPMAG00000008620	dbr1	99	50.597	FBgn0035838	ldbr	78	50.597	Drosophila_melanogaster
ENSPMAG00000008620	dbr1	70	73.881	ENSETEG00000011830	DBR1	50	73.881	Echinops_telfairi
ENSPMAG00000008620	dbr1	99	54.474	ENSEBUG00000007494	dbr1	67	54.474	Eptatretus_burgeri
ENSPMAG00000008620	dbr1	100	61.316	ENSEASG00005003788	DBR1	70	61.316	Equus_asinus_asinus
ENSPMAG00000008620	dbr1	100	61.579	ENSECAG00000013920	DBR1	70	61.579	Equus_caballus
ENSPMAG00000008620	dbr1	100	50.526	ENSEEUG00000007059	DBR1	70	50.526	Erinaceus_europaeus
ENSPMAG00000008620	dbr1	99	61.640	ENSELUG00000005587	dbr1	68	61.640	Esox_lucius
ENSPMAG00000008620	dbr1	100	61.053	ENSFCAG00000002229	DBR1	70	61.053	Felis_catus
ENSPMAG00000008620	dbr1	100	59.737	ENSFALG00000013467	DBR1	61	59.737	Ficedula_albicollis
ENSPMAG00000008620	dbr1	100	61.579	ENSFDAG00000009524	DBR1	70	61.579	Fukomys_damarensis
ENSPMAG00000008620	dbr1	99	58.466	ENSFHEG00000001743	dbr1	68	58.466	Fundulus_heteroclitus
ENSPMAG00000008620	dbr1	99	59.524	ENSGMOG00000006925	dbr1	68	59.524	Gadus_morhua
ENSPMAG00000008620	dbr1	100	50.263	ENSGALG00000043797	DBR1	68	50.263	Gallus_gallus
ENSPMAG00000008620	dbr1	99	58.995	ENSGAFG00000001046	dbr1	70	58.995	Gambusia_affinis
ENSPMAG00000008620	dbr1	99	57.256	ENSGACG00000009122	dbr1	68	57.256	Gasterosteus_aculeatus
ENSPMAG00000008620	dbr1	100	60.263	ENSGAGG00000001244	DBR1	71	60.263	Gopherus_agassizii
ENSPMAG00000008620	dbr1	100	55.263	ENSGGOG00000004564	DBR1	68	55.263	Gorilla_gorilla
ENSPMAG00000008620	dbr1	99	60.053	ENSHBUG00000000882	dbr1	68	60.053	Haplochromis_burtoni
ENSPMAG00000008620	dbr1	100	62.105	ENSHGLG00000014529	Dbr1	70	62.105	Heterocephalus_glaber_female
ENSPMAG00000008620	dbr1	100	62.105	ENSHGLG00100013202	Dbr1	70	62.105	Heterocephalus_glaber_male
ENSPMAG00000008620	dbr1	99	60.053	ENSHCOG00000004179	dbr1	70	60.053	Hippocampus_comes
ENSPMAG00000008620	dbr1	99	61.905	ENSIPUG00000023749	dbr1	66	61.905	Ictalurus_punctatus
ENSPMAG00000008620	dbr1	100	62.105	ENSSTOG00000007122	DBR1	70	62.105	Ictidomys_tridecemlineatus
ENSPMAG00000008620	dbr1	100	61.053	ENSJJAG00000017080	Dbr1	70	61.053	Jaculus_jaculus
ENSPMAG00000008620	dbr1	99	56.614	ENSKMAG00000004869	dbr1	69	56.614	Kryptolebias_marmoratus
ENSPMAG00000008620	dbr1	99	58.730	ENSLBEG00000021307	dbr1	67	58.995	Labrus_bergylta
ENSPMAG00000008620	dbr1	99	60.422	ENSLACG00000005547	DBR1	70	60.422	Latimeria_chalumnae
ENSPMAG00000008620	dbr1	99	62.963	ENSLOCG00000004160	dbr1	67	62.963	Lepisosteus_oculatus
ENSPMAG00000008620	dbr1	100	60.789	ENSLAFG00000005827	DBR1	70	60.789	Loxodonta_africana
ENSPMAG00000008620	dbr1	100	61.053	ENSMFAG00000043642	DBR1	70	61.053	Macaca_fascicularis
ENSPMAG00000008620	dbr1	100	61.053	ENSMMUG00000021284	DBR1	70	61.053	Macaca_mulatta
ENSPMAG00000008620	dbr1	100	61.053	ENSMNEG00000041740	DBR1	70	61.053	Macaca_nemestrina
ENSPMAG00000008620	dbr1	91	48.266	ENSMLEG00000034542	DBR1	58	50.794	Mandrillus_leucophaeus
ENSPMAG00000008620	dbr1	99	60.053	ENSMAMG00000012205	dbr1	67	60.053	Mastacembelus_armatus
ENSPMAG00000008620	dbr1	99	60.053	ENSMZEG00005021338	dbr1	68	60.053	Maylandia_zebra
ENSPMAG00000008620	dbr1	72	52.015	ENSMGAG00000002142	DBR1	64	52.015	Meleagris_gallopavo
ENSPMAG00000008620	dbr1	100	60.789	ENSMAUG00000010037	Dbr1	70	60.789	Mesocricetus_auratus
ENSPMAG00000008620	dbr1	100	61.842	ENSMICG00000049533	DBR1	70	61.842	Microcebus_murinus
ENSPMAG00000008620	dbr1	100	60.526	ENSMOCG00000018746	Dbr1	71	60.526	Microtus_ochrogaster
ENSPMAG00000008620	dbr1	99	59.524	ENSMMOG00000000719	dbr1	67	59.524	Mola_mola
ENSPMAG00000008620	dbr1	100	60.263	ENSMODG00000018554	DBR1	70	60.263	Monodelphis_domestica
ENSPMAG00000008620	dbr1	99	58.995	ENSMALG00000022283	dbr1	65	58.995	Monopterus_albus
ENSPMAG00000008620	dbr1	100	60.526	MGP_CAROLIEiJ_G0032564	Dbr1	96	63.750	Mus_caroli
ENSPMAG00000008620	dbr1	100	60.526	ENSMUSG00000032469	Dbr1	96	63.750	Mus_musculus
ENSPMAG00000008620	dbr1	100	60.526	MGP_PahariEiJ_G0015433	Dbr1	96	63.750	Mus_pahari
ENSPMAG00000008620	dbr1	100	60.526	MGP_SPRETEiJ_G0033708	Dbr1	96	63.750	Mus_spretus
ENSPMAG00000008620	dbr1	100	61.053	ENSMPUG00000009230	DBR1	70	61.053	Mustela_putorius_furo
ENSPMAG00000008620	dbr1	100	61.316	ENSMLUG00000026117	DBR1	70	61.316	Myotis_lucifugus
ENSPMAG00000008620	dbr1	100	60.526	ENSNGAG00000003518	Dbr1	70	60.526	Nannospalax_galili
ENSPMAG00000008620	dbr1	99	60.053	ENSNBRG00000016318	dbr1	68	60.053	Neolamprologus_brichardi
ENSPMAG00000008620	dbr1	100	60.789	ENSNLEG00000032263	DBR1	68	60.789	Nomascus_leucogenys
ENSPMAG00000008620	dbr1	100	60.000	ENSMEUG00000009188	DBR1	70	60.000	Notamacropus_eugenii
ENSPMAG00000008620	dbr1	91	52.907	ENSOPRG00000016510	DBR1	68	52.907	Ochotona_princeps
ENSPMAG00000008620	dbr1	100	61.316	ENSODEG00000018178	DBR1	70	61.316	Octodon_degus
ENSPMAG00000008620	dbr1	99	60.317	ENSONIG00000013801	dbr1	67	60.317	Oreochromis_niloticus
ENSPMAG00000008620	dbr1	83	58.675	ENSOANG00000007783	DBR1	64	58.675	Ornithorhynchus_anatinus
ENSPMAG00000008620	dbr1	92	61.714	ENSOCUG00000015129	DBR1	61	61.714	Oryctolagus_cuniculus
ENSPMAG00000008620	dbr1	99	59.788	ENSORLG00015001112	dbr1	71	60.053	Oryzias_latipes_hsok
ENSPMAG00000008620	dbr1	99	60.053	ENSOMEG00000000857	dbr1	72	60.317	Oryzias_melastigma
ENSPMAG00000008620	dbr1	100	62.105	ENSOGAG00000033095	DBR1	70	62.105	Otolemur_garnettii
ENSPMAG00000008620	dbr1	100	60.263	ENSOARG00000007589	DBR1	70	60.263	Ovis_aries
ENSPMAG00000008620	dbr1	100	61.053	ENSPPAG00000031137	DBR1	70	61.053	Pan_paniscus
ENSPMAG00000008620	dbr1	100	61.053	ENSPPRG00000013629	DBR1	70	61.053	Panthera_pardus
ENSPMAG00000008620	dbr1	97	60.054	ENSPTIG00000012674	DBR1	68	60.054	Panthera_tigris_altaica
ENSPMAG00000008620	dbr1	100	61.053	ENSPTRG00000015441	DBR1	70	61.053	Pan_troglodytes
ENSPMAG00000008620	dbr1	100	61.053	ENSPANG00000012664	DBR1	70	61.053	Papio_anubis
ENSPMAG00000008620	dbr1	99	61.376	ENSPKIG00000000310	dbr1	66	61.376	Paramormyrops_kingsleyae
ENSPMAG00000008620	dbr1	83	58.413	ENSPSIG00000015486	DBR1	67	58.413	Pelodiscus_sinensis
ENSPMAG00000008620	dbr1	100	60.526	ENSPEMG00000020602	Dbr1	69	60.526	Peromyscus_maniculatus_bairdii
ENSPMAG00000008620	dbr1	100	60.789	ENSPCIG00000006494	DBR1	70	60.789	Phascolarctos_cinereus
ENSPMAG00000008620	dbr1	56	48.113	ENSPLAG00000002421	-	57	48.113	Poecilia_latipinna
ENSPMAG00000008620	dbr1	99	59.259	ENSPLAG00000011665	dbr1	70	59.259	Poecilia_latipinna
ENSPMAG00000008620	dbr1	99	59.259	ENSPMEG00000010080	dbr1	70	59.259	Poecilia_mexicana
ENSPMAG00000008620	dbr1	57	48.387	ENSPMEG00000020884	-	54	48.387	Poecilia_mexicana
ENSPMAG00000008620	dbr1	99	59.259	ENSPREG00000020157	dbr1	70	59.259	Poecilia_reticulata
ENSPMAG00000008620	dbr1	100	61.053	ENSPPYG00000014139	DBR1	69	61.053	Pongo_abelii
ENSPMAG00000008620	dbr1	100	61.053	ENSPCAG00000012956	DBR1	97	61.053	Procavia_capensis
ENSPMAG00000008620	dbr1	100	61.842	ENSPCOG00000016894	DBR1	69	61.842	Propithecus_coquereli
ENSPMAG00000008620	dbr1	100	51.579	ENSPVAG00000007713	DBR1	70	51.579	Pteropus_vampyrus
ENSPMAG00000008620	dbr1	99	60.053	ENSPNYG00000015453	dbr1	67	60.053	Pundamilia_nyererei
ENSPMAG00000008620	dbr1	99	63.492	ENSPNAG00000025595	dbr1	66	63.492	Pygocentrus_nattereri
ENSPMAG00000008620	dbr1	100	60.526	ENSRNOG00000014588	Dbr1	70	60.526	Rattus_norvegicus
ENSPMAG00000008620	dbr1	100	61.053	ENSRBIG00000045002	DBR1	70	61.053	Rhinopithecus_bieti
ENSPMAG00000008620	dbr1	100	61.053	ENSRROG00000044819	DBR1	70	61.053	Rhinopithecus_roxellana
ENSPMAG00000008620	dbr1	72	37.025	YKL149C	DBR1	78	37.025	Saccharomyces_cerevisiae
ENSPMAG00000008620	dbr1	100	61.053	ENSSBOG00000032048	DBR1	70	61.053	Saimiri_boliviensis_boliviensis
ENSPMAG00000008620	dbr1	100	60.789	ENSSHAG00000006752	DBR1	70	60.789	Sarcophilus_harrisii
ENSPMAG00000008620	dbr1	99	60.317	ENSSFOG00015011410	dbr1	71	60.317	Scleropages_formosus
ENSPMAG00000008620	dbr1	99	60.582	ENSSMAG00000016078	dbr1	68	60.847	Scophthalmus_maximus
ENSPMAG00000008620	dbr1	99	59.788	ENSSDUG00000017849	dbr1	66	59.788	Seriola_dumerili
ENSPMAG00000008620	dbr1	99	58.995	ENSSLDG00000019891	dbr1	67	58.995	Seriola_lalandi_dorsalis
ENSPMAG00000008620	dbr1	99	58.005	ENSSARG00000009558	-	71	58.005	Sorex_araneus
ENSPMAG00000008620	dbr1	83	58.228	ENSSPUG00000004724	DBR1	60	58.228	Sphenodon_punctatus
ENSPMAG00000008620	dbr1	99	59.524	ENSSPAG00000016892	dbr1	68	59.524	Stegastes_partitus
ENSPMAG00000008620	dbr1	100	61.316	ENSSSCG00000031098	DBR1	71	61.316	Sus_scrofa
ENSPMAG00000008620	dbr1	91	58.721	ENSTGUG00000007073	DBR1	66	58.721	Taeniopygia_guttata
ENSPMAG00000008620	dbr1	99	59.788	ENSTRUG00000021594	dbr1	67	59.788	Takifugu_rubripes
ENSPMAG00000008620	dbr1	99	58.995	ENSTNIG00000006710	dbr1	68	58.995	Tetraodon_nigroviridis
ENSPMAG00000008620	dbr1	100	61.842	ENSTTRG00000004020	DBR1	70	61.842	Tursiops_truncatus
ENSPMAG00000008620	dbr1	100	61.053	ENSUAMG00000004639	DBR1	70	61.053	Ursus_americanus
ENSPMAG00000008620	dbr1	100	61.053	ENSUMAG00000015012	DBR1	70	61.053	Ursus_maritimus
ENSPMAG00000008620	dbr1	100	56.316	ENSVPAG00000011711	DBR1	70	56.316	Vicugna_pacos
ENSPMAG00000008620	dbr1	100	61.053	ENSVVUG00000026604	DBR1	70	61.053	Vulpes_vulpes
ENSPMAG00000008620	dbr1	100	56.579	ENSXETG00000027491	dbr1	71	56.579	Xenopus_tropicalis
ENSPMAG00000008620	dbr1	99	59.259	ENSXCOG00000018078	dbr1	70	59.259	Xiphophorus_couchianus
ENSPMAG00000008620	dbr1	99	59.259	ENSXMAG00000007311	dbr1	70	59.259	Xiphophorus_maculatus