EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000008621 (Gene tree)
Gene ID: -
Gene Symbol: tnpo3
Alias: -
Full Name: transportin 3
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 56626 bases
Position: chrGL476761:79490-136115
Accession: ZDB-GENE-040426-708
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000009532	Xpo1	PF08389.12	1.3e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000009572	-	2652	-	ENSPMAP00000009532	883 (aa)	-	S4RWE2

Gene Model

Click here to download ENSPMAG00000008621's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000008621's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000008621	tnpo3	100	72.933	ENSG00000064419	TNPO3	100	72.410	Homo_sapiens
ENSPMAG00000008621	tnpo3	100	72.480	ENSAPOG00000018347	tnpo3	95	72.480	Acanthochromis_polyacanthus
ENSPMAG00000008621	tnpo3	99	70.285	ENSAMEG00000005135	TNPO3	94	70.285	Ailuropoda_melanoleuca
ENSPMAG00000008621	tnpo3	100	70.668	ENSACIG00000005897	tnpo3	99	70.668	Amphilophus_citrinellus
ENSPMAG00000008621	tnpo3	100	72.480	ENSAOCG00000008264	tnpo3	95	72.480	Amphiprion_ocellaris
ENSPMAG00000008621	tnpo3	100	72.480	ENSAPEG00000024300	tnpo3	99	72.480	Amphiprion_percula
ENSPMAG00000008621	tnpo3	100	72.254	ENSATEG00000003197	tnpo3	95	72.254	Anabas_testudineus
ENSPMAG00000008621	tnpo3	74	75.472	ENSAPLG00000005946	TNPO3	89	75.472	Anas_platyrhynchos
ENSPMAG00000008621	tnpo3	84	72.237	ENSACAG00000013470	TNPO3	92	72.237	Anolis_carolinensis
ENSPMAG00000008621	tnpo3	100	72.707	ENSANAG00000037940	TNPO3	95	74.722	Aotus_nancymaae
ENSPMAG00000008621	tnpo3	100	72.367	ENSACLG00000005561	tnpo3	95	72.367	Astatotilapia_calliptera
ENSPMAG00000008621	tnpo3	100	72.480	ENSAMXG00000016236	tnpo3	95	72.480	Astyanax_mexicanus
ENSPMAG00000008621	tnpo3	100	72.593	ENSBTAG00000004992	TNPO3	100	72.061	Bos_taurus
ENSPMAG00000008621	tnpo3	100	72.820	ENSCJAG00000018085	TNPO3	95	74.722	Callithrix_jacchus
ENSPMAG00000008621	tnpo3	100	72.933	ENSCAFG00000001543	TNPO3	95	72.933	Canis_familiaris
ENSPMAG00000008621	tnpo3	100	72.933	ENSCAFG00020022462	TNPO3	95	72.604	Canis_lupus_dingo
ENSPMAG00000008621	tnpo3	100	72.593	ENSCHIG00000011721	TNPO3	95	72.593	Capra_hircus
ENSPMAG00000008621	tnpo3	100	72.933	ENSTSYG00000002989	TNPO3	95	75.000	Carlito_syrichta
ENSPMAG00000008621	tnpo3	68	78.495	ENSCAPG00000005843	TNPO3	91	78.495	Cavia_aperea
ENSPMAG00000008621	tnpo3	100	72.593	ENSCPOG00000039784	TNPO3	95	72.593	Cavia_porcellus
ENSPMAG00000008621	tnpo3	100	72.820	ENSCCAG00000033826	TNPO3	100	72.293	Cebus_capucinus
ENSPMAG00000008621	tnpo3	100	72.933	ENSCATG00000030018	TNPO3	100	72.410	Cercocebus_atys
ENSPMAG00000008621	tnpo3	100	71.928	ENSCLAG00000016298	TNPO3	95	71.928	Chinchilla_lanigera
ENSPMAG00000008621	tnpo3	100	72.933	ENSCSAG00000009966	TNPO3	95	72.933	Chlorocebus_sabaeus
ENSPMAG00000008621	tnpo3	93	54.854	ENSCHOG00000011547	TNPO3	89	54.854	Choloepus_hoffmanni
ENSPMAG00000008621	tnpo3	97	72.177	ENSCPBG00000017497	TNPO3	100	72.177	Chrysemys_picta_bellii
ENSPMAG00000008621	tnpo3	100	49.437	ENSCING00000005042	-	95	49.437	Ciona_intestinalis
ENSPMAG00000008621	tnpo3	100	47.351	ENSCSAVG00000008623	-	95	47.351	Ciona_savignyi
ENSPMAG00000008621	tnpo3	100	72.933	ENSCANG00000033070	TNPO3	100	72.410	Colobus_angolensis_palliatus
ENSPMAG00000008621	tnpo3	100	72.707	ENSCGRG00001015925	Tnpo3	95	72.707	Cricetulus_griseus_chok1gshd
ENSPMAG00000008621	tnpo3	100	72.707	ENSCGRG00000010379	Tnpo3	95	72.707	Cricetulus_griseus_crigri
ENSPMAG00000008621	tnpo3	100	71.914	ENSCSEG00000005952	tnpo3	95	71.914	Cynoglossus_semilaevis
ENSPMAG00000008621	tnpo3	100	72.254	ENSCVAG00000020285	tnpo3	95	72.254	Cyprinodon_variegatus
ENSPMAG00000008621	tnpo3	100	72.593	ENSDARG00000045680	tnpo3	95	72.593	Danio_rerio
ENSPMAG00000008621	tnpo3	100	72.820	ENSDNOG00000002556	TNPO3	95	72.820	Dasypus_novemcinctus
ENSPMAG00000008621	tnpo3	60	70.501	ENSDORG00000002433	Tnpo3	88	70.501	Dipodomys_ordii
ENSPMAG00000008621	tnpo3	100	43.352	FBgn0031456	Tnpo-SR	96	43.352	Drosophila_melanogaster
ENSPMAG00000008621	tnpo3	94	74.515	ENSETEG00000002101	TNPO3	85	74.515	Echinops_telfairi
ENSPMAG00000008621	tnpo3	100	81.087	ENSEBUG00000016931	tnpo3	96	81.087	Eptatretus_burgeri
ENSPMAG00000008621	tnpo3	100	72.933	ENSEASG00005008677	TNPO3	95	72.933	Equus_asinus_asinus
ENSPMAG00000008621	tnpo3	100	72.933	ENSECAG00000012815	TNPO3	100	72.410	Equus_caballus
ENSPMAG00000008621	tnpo3	99	69.162	ENSEEUG00000005178	TNPO3	93	69.162	Erinaceus_europaeus
ENSPMAG00000008621	tnpo3	60	31.844	ENSEEUG00000011681	IPO13	68	32.961	Erinaceus_europaeus
ENSPMAG00000008621	tnpo3	100	72.254	ENSELUG00000012153	tnpo3	96	72.254	Esox_lucius
ENSPMAG00000008621	tnpo3	100	72.933	ENSFCAG00000018186	TNPO3	100	72.410	Felis_catus
ENSPMAG00000008621	tnpo3	100	70.123	ENSFALG00000010667	TNPO3	99	70.123	Ficedula_albicollis
ENSPMAG00000008621	tnpo3	100	72.203	ENSFDAG00000019578	TNPO3	95	72.203	Fukomys_damarensis
ENSPMAG00000008621	tnpo3	100	72.140	ENSFHEG00000012859	tnpo3	96	72.140	Fundulus_heteroclitus
ENSPMAG00000008621	tnpo3	100	71.687	ENSGMOG00000007324	tnpo3	95	71.687	Gadus_morhua
ENSPMAG00000008621	tnpo3	59	71.565	ENSGALG00000039420	TNPO3	91	71.565	Gallus_gallus
ENSPMAG00000008621	tnpo3	100	72.140	ENSGACG00000000699	tnpo3	95	72.140	Gasterosteus_aculeatus
ENSPMAG00000008621	tnpo3	97	72.061	ENSGAGG00000006777	TNPO3	100	72.061	Gopherus_agassizii
ENSPMAG00000008621	tnpo3	100	72.933	ENSGGOG00000008339	TNPO3	100	72.410	Gorilla_gorilla
ENSPMAG00000008621	tnpo3	100	72.367	ENSHBUG00000008351	tnpo3	95	72.367	Haplochromis_burtoni
ENSPMAG00000008621	tnpo3	100	72.820	ENSHGLG00000004463	TNPO3	95	72.820	Heterocephalus_glaber_female
ENSPMAG00000008621	tnpo3	100	72.820	ENSHGLG00100005509	TNPO3	95	72.820	Heterocephalus_glaber_male
ENSPMAG00000008621	tnpo3	100	72.140	ENSHCOG00000007221	tnpo3	95	72.140	Hippocampus_comes
ENSPMAG00000008621	tnpo3	100	71.801	ENSIPUG00000014979	TNPO3	95	71.801	Ictalurus_punctatus
ENSPMAG00000008621	tnpo3	100	72.820	ENSSTOG00000004885	TNPO3	100	72.293	Ictidomys_tridecemlineatus
ENSPMAG00000008621	tnpo3	93	71.394	ENSJJAG00000013530	Tnpo3	91	71.394	Jaculus_jaculus
ENSPMAG00000008621	tnpo3	100	72.140	ENSKMAG00000010497	tnpo3	95	72.140	Kryptolebias_marmoratus
ENSPMAG00000008621	tnpo3	100	68.856	ENSLBEG00000011988	-	99	68.856	Labrus_bergylta
ENSPMAG00000008621	tnpo3	100	71.008	ENSLBEG00000016595	tnpo3	99	71.008	Labrus_bergylta
ENSPMAG00000008621	tnpo3	83	84.028	ENSLACG00000002351	TNPO3	94	84.028	Latimeria_chalumnae
ENSPMAG00000008621	tnpo3	100	74.292	ENSLOCG00000015556	tnpo3	95	74.292	Lepisosteus_oculatus
ENSPMAG00000008621	tnpo3	100	72.379	ENSLAFG00000002738	TNPO3	95	72.379	Loxodonta_africana
ENSPMAG00000008621	tnpo3	100	72.933	ENSMFAG00000032385	TNPO3	100	72.410	Macaca_fascicularis
ENSPMAG00000008621	tnpo3	100	72.933	ENSMMUG00000004311	TNPO3	100	72.410	Macaca_mulatta
ENSPMAG00000008621	tnpo3	100	72.933	ENSMNEG00000045277	TNPO3	100	72.410	Macaca_nemestrina
ENSPMAG00000008621	tnpo3	100	72.933	ENSMLEG00000037881	TNPO3	100	72.410	Mandrillus_leucophaeus
ENSPMAG00000008621	tnpo3	100	72.593	ENSMAMG00000021096	tnpo3	95	72.593	Mastacembelus_armatus
ENSPMAG00000008621	tnpo3	100	72.367	ENSMZEG00005015084	tnpo3	95	72.367	Maylandia_zebra
ENSPMAG00000008621	tnpo3	82	70.458	ENSMGAG00000002839	TNPO3	99	70.458	Meleagris_gallopavo
ENSPMAG00000008621	tnpo3	100	72.707	ENSMAUG00000013463	Tnpo3	95	72.707	Mesocricetus_auratus
ENSPMAG00000008621	tnpo3	100	72.933	ENSMICG00000000140	TNPO3	95	75.000	Microcebus_murinus
ENSPMAG00000008621	tnpo3	83	37.662	ENSMICG00000011003	IPO13	88	34.921	Microcebus_murinus
ENSPMAG00000008621	tnpo3	100	72.707	ENSMOCG00000013264	Tnpo3	95	72.707	Microtus_ochrogaster
ENSPMAG00000008621	tnpo3	100	72.254	ENSMMOG00000005887	tnpo3	95	72.254	Mola_mola
ENSPMAG00000008621	tnpo3	100	72.707	ENSMODG00000014700	TNPO3	95	72.707	Monodelphis_domestica
ENSPMAG00000008621	tnpo3	100	72.140	ENSMALG00000006675	tnpo3	95	72.140	Monopterus_albus
ENSPMAG00000008621	tnpo3	100	72.707	MGP_CAROLIEiJ_G0028176	Tnpo3	95	72.707	Mus_caroli
ENSPMAG00000008621	tnpo3	100	72.707	ENSMUSG00000012535	Tnpo3	95	72.707	Mus_musculus
ENSPMAG00000008621	tnpo3	100	72.707	MGP_PahariEiJ_G0021934	Tnpo3	95	72.707	Mus_pahari
ENSPMAG00000008621	tnpo3	100	72.593	MGP_SPRETEiJ_G0029176	Tnpo3	95	72.593	Mus_spretus
ENSPMAG00000008621	tnpo3	100	72.933	ENSMPUG00000006021	TNPO3	95	72.933	Mustela_putorius_furo
ENSPMAG00000008621	tnpo3	100	66.025	ENSMLUG00000000947	TNPO3	95	66.025	Myotis_lucifugus
ENSPMAG00000008621	tnpo3	100	72.820	ENSNGAG00000008722	Tnpo3	95	72.820	Nannospalax_galili
ENSPMAG00000008621	tnpo3	100	70.781	ENSNBRG00000019001	tnpo3	95	72.137	Neolamprologus_brichardi
ENSPMAG00000008621	tnpo3	100	70.120	ENSNLEG00000012491	TNPO3	95	75.000	Nomascus_leucogenys
ENSPMAG00000008621	tnpo3	92	69.271	ENSMEUG00000002445	TNPO3	87	69.271	Notamacropus_eugenii
ENSPMAG00000008621	tnpo3	90	84.028	ENSOPRG00000006163	TNPO3	86	84.028	Ochotona_princeps
ENSPMAG00000008621	tnpo3	98	73.001	ENSODEG00000012826	TNPO3	95	73.001	Octodon_degus
ENSPMAG00000008621	tnpo3	100	72.367	ENSONIG00000007604	tnpo3	95	72.367	Oreochromis_niloticus
ENSPMAG00000008621	tnpo3	99	69.924	ENSOANG00000011451	TNPO3	99	69.924	Ornithorhynchus_anatinus
ENSPMAG00000008621	tnpo3	99	70.395	ENSOCUG00000010105	TNPO3	94	70.395	Oryctolagus_cuniculus
ENSPMAG00000008621	tnpo3	100	72.480	ENSORLG00000029369	tnpo3	95	72.480	Oryzias_latipes
ENSPMAG00000008621	tnpo3	100	72.480	ENSORLG00020003464	tnpo3	95	72.480	Oryzias_latipes_hni
ENSPMAG00000008621	tnpo3	100	72.480	ENSORLG00015002610	tnpo3	95	72.480	Oryzias_latipes_hsok
ENSPMAG00000008621	tnpo3	52	30.168	ENSOMEG00000001924	ipo13	85	30.168	Oryzias_melastigma
ENSPMAG00000008621	tnpo3	100	72.027	ENSOMEG00000021006	tnpo3	95	72.027	Oryzias_melastigma
ENSPMAG00000008621	tnpo3	100	72.820	ENSOGAG00000015340	TNPO3	95	72.820	Otolemur_garnettii
ENSPMAG00000008621	tnpo3	100	72.593	ENSOARG00000004026	TNPO3	95	72.593	Ovis_aries
ENSPMAG00000008621	tnpo3	100	72.933	ENSPPAG00000034975	TNPO3	100	72.410	Pan_paniscus
ENSPMAG00000008621	tnpo3	100	72.933	ENSPPRG00000002050	TNPO3	95	75.000	Panthera_pardus
ENSPMAG00000008621	tnpo3	100	72.933	ENSPTIG00000016167	TNPO3	95	75.000	Panthera_tigris_altaica
ENSPMAG00000008621	tnpo3	100	72.933	ENSPTRG00000019676	TNPO3	100	72.410	Pan_troglodytes
ENSPMAG00000008621	tnpo3	98	73.064	ENSPANG00000022226	TNPO3	95	75.000	Papio_anubis
ENSPMAG00000008621	tnpo3	100	71.461	ENSPKIG00000023234	tnpo3	95	71.461	Paramormyrops_kingsleyae
ENSPMAG00000008621	tnpo3	100	68.510	ENSPKIG00000008628	-	95	68.510	Paramormyrops_kingsleyae
ENSPMAG00000008621	tnpo3	60	64.773	ENSPMGG00000009763	tnpo3	91	64.773	Periophthalmus_magnuspinnatus
ENSPMAG00000008621	tnpo3	100	72.707	ENSPEMG00000000422	Tnpo3	95	72.707	Peromyscus_maniculatus_bairdii
ENSPMAG00000008621	tnpo3	100	72.254	ENSPCIG00000011366	TNPO3	95	72.254	Phascolarctos_cinereus
ENSPMAG00000008621	tnpo3	100	71.914	ENSPFOG00000013592	tnpo3	95	71.914	Poecilia_formosa
ENSPMAG00000008621	tnpo3	100	71.914	ENSPLAG00000010188	tnpo3	95	71.914	Poecilia_latipinna
ENSPMAG00000008621	tnpo3	100	71.914	ENSPMEG00000022731	tnpo3	95	71.914	Poecilia_mexicana
ENSPMAG00000008621	tnpo3	100	72.933	ENSPPYG00000017990	TNPO3	95	72.933	Pongo_abelii
ENSPMAG00000008621	tnpo3	99	64.294	ENSPCAG00000010158	TNPO3	94	64.294	Procavia_capensis
ENSPMAG00000008621	tnpo3	87	74.110	ENSPCOG00000023901	TNPO3	91	74.110	Propithecus_coquereli
ENSPMAG00000008621	tnpo3	99	67.763	ENSPVAG00000015757	TNPO3	94	67.763	Pteropus_vampyrus
ENSPMAG00000008621	tnpo3	100	72.367	ENSPNYG00000002349	tnpo3	95	72.367	Pundamilia_nyererei
ENSPMAG00000008621	tnpo3	100	72.140	ENSPNAG00000001142	tnpo3	95	72.140	Pygocentrus_nattereri
ENSPMAG00000008621	tnpo3	100	72.707	ENSRNOG00000021758	Tnpo3	100	72.177	Rattus_norvegicus
ENSPMAG00000008621	tnpo3	100	72.820	ENSRBIG00000042549	TNPO3	100	72.293	Rhinopithecus_bieti
ENSPMAG00000008621	tnpo3	100	72.820	ENSRROG00000039264	TNPO3	95	75.000	Rhinopithecus_roxellana
ENSPMAG00000008621	tnpo3	100	56.707	ENSSBOG00000029642	TNPO3	95	56.707	Saimiri_boliviensis_boliviensis
ENSPMAG00000008621	tnpo3	100	72.820	ENSSHAG00000006837	TNPO3	99	72.820	Sarcophilus_harrisii
ENSPMAG00000008621	tnpo3	100	69.196	ENSSFOG00015004256	tnpo3	96	69.196	Scleropages_formosus
ENSPMAG00000008621	tnpo3	100	71.914	ENSSFOG00015001474	tnpo3	95	71.914	Scleropages_formosus
ENSPMAG00000008621	tnpo3	100	73.046	ENSSMAG00000010422	tnpo3	93	73.046	Scophthalmus_maximus
ENSPMAG00000008621	tnpo3	100	72.933	ENSSDUG00000004850	tnpo3	95	72.933	Seriola_dumerili
ENSPMAG00000008621	tnpo3	100	72.933	ENSSLDG00000016927	tnpo3	95	72.933	Seriola_lalandi_dorsalis
ENSPMAG00000008621	tnpo3	99	63.366	ENSSARG00000013893	TNPO3	98	63.366	Sorex_araneus
ENSPMAG00000008621	tnpo3	100	68.362	ENSSPUG00000007457	TNPO3	95	68.362	Sphenodon_punctatus
ENSPMAG00000008621	tnpo3	78	72.886	ENSSPAG00000014209	tnpo3	93	72.886	Stegastes_partitus
ENSPMAG00000008621	tnpo3	100	72.933	ENSSSCG00000016572	TNPO3	100	72.410	Sus_scrofa
ENSPMAG00000008621	tnpo3	100	70.880	ENSTNIG00000003347	tnpo3	95	70.880	Tetraodon_nigroviridis
ENSPMAG00000008621	tnpo3	87	75.081	ENSTBEG00000007220	TNPO3	86	75.081	Tupaia_belangeri
ENSPMAG00000008621	tnpo3	99	62.061	ENSTTRG00000014618	TNPO3	94	62.061	Tursiops_truncatus
ENSPMAG00000008621	tnpo3	100	72.933	ENSUAMG00000021281	TNPO3	95	72.933	Ursus_americanus
ENSPMAG00000008621	tnpo3	100	72.933	ENSUMAG00000006882	TNPO3	95	73.117	Ursus_maritimus
ENSPMAG00000008621	tnpo3	89	60.247	ENSVPAG00000006166	TNPO3	88	60.247	Vicugna_pacos
ENSPMAG00000008621	tnpo3	100	72.933	ENSVVUG00000011004	TNPO3	95	72.655	Vulpes_vulpes
ENSPMAG00000008621	tnpo3	100	65.914	ENSXETG00000015009	tnpo3	96	65.914	Xenopus_tropicalis
ENSPMAG00000008621	tnpo3	100	71.461	ENSXMAG00000013062	tnpo3	95	71.461	Xiphophorus_maculatus