EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000008638 (Gene tree)
Gene ID: -
Gene Symbol: NXF1
Alias: -
Full Name: nuclear RNA export factor 1
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Plus strand
Length: 5954 bases
Position: chrGL478613:31000-36953
Accession: 8071
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000009507	TAP_C	PF03943.13	5.9e-06	1	1
ENSPMAP00000009507	NTF2	PF02136.20	3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000009547	NXF1-201	759	-	ENSPMAP00000009507	253 (aa)	-	S4RWB7

Gene Model

Click here to download ENSPMAG00000008638's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000008638's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000008638	NXF1	100	60.079	ENSG00000162231	NXF1	73	57.692	Homo_sapiens
ENSPMAG00000008638	NXF1	54	37.226	ENSAMEG00000011543	-	68	36.913	Ailuropoda_melanoleuca
ENSPMAG00000008638	NXF1	100	42.424	ENSCAFG00000031569	-	69	38.014	Canis_familiaris
ENSPMAG00000008638	NXF1	100	40.078	ENSTSYG00000037237	-	61	40.078	Carlito_syrichta
ENSPMAG00000008638	NXF1	100	60.079	ENSCATG00000044025	NXF1	60	59.336	Cercocebus_atys
ENSPMAG00000008638	NXF1	100	43.798	ENSDARG00000086017	zgc:153681	77	52.174	Danio_rerio
ENSPMAG00000008638	NXF1	53	30.075	ENSDNOG00000035166	-	71	30.827	Dasypus_novemcinctus
ENSPMAG00000008638	NXF1	99	37.643	ENSDNOG00000033975	-	50	37.643	Dasypus_novemcinctus
ENSPMAG00000008638	NXF1	91	35.931	ENSETEG00000007641	-	71	35.931	Echinops_telfairi
ENSPMAG00000008638	NXF1	100	57.031	ENSEBUG00000013841	nxf1	60	57.031	Eptatretus_burgeri
ENSPMAG00000008638	NXF1	100	58.893	ENSEASG00005011368	NXF1	61	58.893	Equus_asinus_asinus
ENSPMAG00000008638	NXF1	100	50.593	ENSELUG00000008534	zgc:153681	60	50.781	Esox_lucius
ENSPMAG00000008638	NXF1	100	39.921	ENSLAFG00000026911	-	93	39.921	Loxodonta_africana
ENSPMAG00000008638	NXF1	100	60.079	ENSMFAG00000045399	NXF1	60	59.336	Macaca_fascicularis
ENSPMAG00000008638	NXF1	95	38.115	ENSMMUG00000032390	-	74	38.115	Macaca_mulatta
ENSPMAG00000008638	NXF1	96	54.286	ENSMALG00000012057	zgc:153681	61	54.286	Monopterus_albus
ENSPMAG00000008638	NXF1	100	56.917	MGP_CAROLIEiJ_G0022651	Nxf1	63	63.768	Mus_caroli
ENSPMAG00000008638	NXF1	99	38.095	MGP_CAROLIEiJ_G0033404	Nxf7	50	38.095	Mus_caroli
ENSPMAG00000008638	NXF1	99	36.111	ENSMUSG00000031410	Nxf7	52	36.111	Mus_musculus
ENSPMAG00000008638	NXF1	100	58.893	ENSMUSG00000010097	Nxf1	62	66.667	Mus_musculus
ENSPMAG00000008638	NXF1	100	56.917	MGP_PahariEiJ_G0014146	Nxf1	63	63.768	Mus_pahari
ENSPMAG00000008638	NXF1	100	37.549	MGP_PahariEiJ_G0031944	Nxf7	50	37.549	Mus_pahari
ENSPMAG00000008638	NXF1	100	59.684	ENSNLEG00000004123	-	61	59.684	Nomascus_leucogenys
ENSPMAG00000008638	NXF1	100	42.023	ENSOGAG00000013503	-	99	42.023	Otolemur_garnettii
ENSPMAG00000008638	NXF1	100	60.079	ENSPANG00000012132	NXF1	60	59.336	Papio_anubis
ENSPMAG00000008638	NXF1	88	35.217	ENSRNOG00000043306	AABR07040617.1	50	35.217	Rattus_norvegicus
ENSPMAG00000008638	NXF1	77	39.086	ENSSARG00000007017	-	55	39.086	Sorex_araneus
ENSPMAG00000008638	NXF1	100	33.202	ENSSARG00000008458	-	53	33.202	Sorex_araneus
ENSPMAG00000008638	NXF1	99	58.730	ENSSARG00000013824	-	50	58.730	Sorex_araneus
ENSPMAG00000008638	NXF1	100	59.684	ENSUAMG00000025875	NXF1	61	59.684	Ursus_americanus