EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000008689 (Gene tree)
Gene ID: -
Gene Symbol: rbfox3b
Alias: -
Full Name: RNA binding fox-1 homolog 3b
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 11120 bases
Position: chrGL480306:198920-210039
Accession: ZDB-GENE-091204-46
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000009574	Fox-1_C	PF12414.8	4.7e-43	1	1
ENSPMAP00000009574	RRM_1	PF00076.22	8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000009614	-	618	-	ENSPMAP00000009574	205 (aa)	-	S4RWI4

Gene Model

Click here to download ENSPMAG00000008689's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000008689's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000008689	rbfox3b	93	76.842	ENSG00000167281	RBFOX3	99	83.333	Homo_sapiens
ENSPMAG00000008689	rbfox3b	99	77.941	ENSAPOG00000021630	rbfox3b	50	75.980	Acanthochromis_polyacanthus
ENSPMAG00000008689	rbfox3b	99	63.855	ENSAMEG00000014170	RBFOX3	60	62.249	Ailuropoda_melanoleuca
ENSPMAG00000008689	rbfox3b	94	70.466	ENSACIG00000010817	rbfox3b	54	65.803	Amphilophus_citrinellus
ENSPMAG00000008689	rbfox3b	94	70.984	ENSAOCG00000010786	-	51	64.623	Amphiprion_ocellaris
ENSPMAG00000008689	rbfox3b	97	59.227	ENSAPEG00000015891	-	53	58.369	Amphiprion_percula
ENSPMAG00000008689	rbfox3b	94	74.093	ENSATEG00000023101	-	55	71.503	Anabas_testudineus
ENSPMAG00000008689	rbfox3b	94	62.780	ENSATEG00000019945	rbfox3b	60	62.780	Anabas_testudineus
ENSPMAG00000008689	rbfox3b	93	76.842	ENSANAG00000023457	RBFOX3	56	74.737	Aotus_nancymaae
ENSPMAG00000008689	rbfox3b	99	77.941	ENSACLG00000020011	rbfox3b	56	74.211	Astatotilapia_calliptera
ENSPMAG00000008689	rbfox3b	93	76.316	ENSACLG00000025552	-	51	72.152	Astatotilapia_calliptera
ENSPMAG00000008689	rbfox3b	94	78.756	ENSAMXG00000037246	rbfox3a	53	76.842	Astyanax_mexicanus
ENSPMAG00000008689	rbfox3b	69	76.596	ENSBTAG00000006280	RBFOX3	59	55.502	Bos_taurus
ENSPMAG00000008689	rbfox3b	93	67.895	ENSCJAG00000009563	RBFOX3	62	59.916	Callithrix_jacchus
ENSPMAG00000008689	rbfox3b	93	76.842	ENSCAFG00000005547	RBFOX3	77	66.667	Canis_familiaris
ENSPMAG00000008689	rbfox3b	99	62.151	ENSCAFG00020008126	RBFOX3	63	61.355	Canis_lupus_dingo
ENSPMAG00000008689	rbfox3b	99	61.355	ENSCHIG00000009124	RBFOX3	63	61.355	Capra_hircus
ENSPMAG00000008689	rbfox3b	93	61.181	ENSTSYG00000029617	RBFOX3	62	60.338	Carlito_syrichta
ENSPMAG00000008689	rbfox3b	99	62.948	ENSCPOG00000021703	RBFOX3	64	64.542	Cavia_porcellus
ENSPMAG00000008689	rbfox3b	93	76.842	ENSCCAG00000028450	RBFOX3	56	74.737	Cebus_capucinus
ENSPMAG00000008689	rbfox3b	93	76.842	ENSCATG00000018349	RBFOX3	56	74.737	Cercocebus_atys
ENSPMAG00000008689	rbfox3b	99	62.151	ENSCLAG00000006449	RBFOX3	63	61.753	Chinchilla_lanigera
ENSPMAG00000008689	rbfox3b	93	76.842	ENSCSAG00000002355	RBFOX3	56	74.737	Chlorocebus_sabaeus
ENSPMAG00000008689	rbfox3b	99	76.961	ENSCPBG00000010904	RBFOX3	55	75.980	Chrysemys_picta_bellii
ENSPMAG00000008689	rbfox3b	93	76.842	ENSCANG00000043120	RBFOX3	56	74.737	Colobus_angolensis_palliatus
ENSPMAG00000008689	rbfox3b	99	62.550	ENSCGRG00001019476	Rbfox3	63	61.355	Cricetulus_griseus_chok1gshd
ENSPMAG00000008689	rbfox3b	99	62.550	ENSCGRG00000003268	Rbfox3	63	61.355	Cricetulus_griseus_crigri
ENSPMAG00000008689	rbfox3b	99	61.576	ENSCSEG00000020606	RBFOX3	50	62.105	Cynoglossus_semilaevis
ENSPMAG00000008689	rbfox3b	99	66.968	ENSCSEG00000015567	RBFOX3	56	65.158	Cynoglossus_semilaevis
ENSPMAG00000008689	rbfox3b	93	70.000	ENSDARG00000074310	rbfox3b	74	69.512	Danio_rerio
ENSPMAG00000008689	rbfox3b	93	78.947	ENSDARG00000010083	rbfox3a	54	76.842	Danio_rerio
ENSPMAG00000008689	rbfox3b	99	61.200	ENSDORG00000005352	Rbfox3	72	60.800	Dipodomys_ordii
ENSPMAG00000008689	rbfox3b	99	89.268	ENSEBUG00000002129	RBFOX3	58	88.406	Eptatretus_burgeri
ENSPMAG00000008689	rbfox3b	93	78.421	ENSEASG00005005059	RBFOX3	56	75.789	Equus_asinus_asinus
ENSPMAG00000008689	rbfox3b	93	78.421	ENSECAG00000023811	RBFOX3	56	75.789	Equus_caballus
ENSPMAG00000008689	rbfox3b	99	77.941	ENSELUG00000017963	rbfox3b	54	73.295	Esox_lucius
ENSPMAG00000008689	rbfox3b	99	76.471	ENSFCAG00000002555	RBFOX3	58	74.510	Felis_catus
ENSPMAG00000008689	rbfox3b	99	50.763	ENSFALG00000012288	RBFOX3	62	50.000	Ficedula_albicollis
ENSPMAG00000008689	rbfox3b	99	56.972	ENSFDAG00000007489	RBFOX3	62	57.769	Fukomys_damarensis
ENSPMAG00000008689	rbfox3b	79	74.074	ENSFHEG00000008550	rbfox3b	52	71.605	Fundulus_heteroclitus
ENSPMAG00000008689	rbfox3b	99	64.143	ENSGMOG00000019304	-	71	62.151	Gadus_morhua
ENSPMAG00000008689	rbfox3b	93	75.263	ENSGAFG00000005025	rbfox3b	50	73.158	Gambusia_affinis
ENSPMAG00000008689	rbfox3b	99	60.714	ENSGACG00000002138	-	63	59.921	Gasterosteus_aculeatus
ENSPMAG00000008689	rbfox3b	99	77.451	ENSGAGG00000020025	RBFOX3	55	76.471	Gopherus_agassizii
ENSPMAG00000008689	rbfox3b	93	76.842	ENSGGOG00000012546	RBFOX3	56	74.737	Gorilla_gorilla
ENSPMAG00000008689	rbfox3b	99	77.941	ENSHBUG00000018099	rbfox3b	50	75.980	Haplochromis_burtoni
ENSPMAG00000008689	rbfox3b	99	76.471	ENSHBUG00000023098	-	55	75.000	Haplochromis_burtoni
ENSPMAG00000008689	rbfox3b	99	62.451	ENSHGLG00000008679	RBFOX3	64	62.451	Heterocephalus_glaber_female
ENSPMAG00000008689	rbfox3b	99	57.540	ENSHGLG00100014739	RBFOX3	64	56.746	Heterocephalus_glaber_male
ENSPMAG00000008689	rbfox3b	94	63.731	ENSHCOG00000001863	RBFOX3	50	59.067	Hippocampus_comes
ENSPMAG00000008689	rbfox3b	94	57.589	ENSIPUG00000021966	rbfox3b	59	57.589	Ictalurus_punctatus
ENSPMAG00000008689	rbfox3b	99	79.902	ENSIPUG00000012010	rbfox3a	53	76.842	Ictalurus_punctatus
ENSPMAG00000008689	rbfox3b	99	59.314	ENSSTOG00000026817	RBFOX3	56	55.392	Ictidomys_tridecemlineatus
ENSPMAG00000008689	rbfox3b	99	61.355	ENSJJAG00000014167	Rbfox3	63	61.355	Jaculus_jaculus
ENSPMAG00000008689	rbfox3b	93	76.842	ENSKMAG00000006726	rbfox3b	53	62.727	Kryptolebias_marmoratus
ENSPMAG00000008689	rbfox3b	99	77.941	ENSLBEG00000004030	rbfox3b	50	75.980	Labrus_bergylta
ENSPMAG00000008689	rbfox3b	99	58.366	ENSLACG00000018409	-	62	56.809	Latimeria_chalumnae
ENSPMAG00000008689	rbfox3b	93	78.947	ENSLOCG00000012267	rbfox3a	53	76.842	Lepisosteus_oculatus
ENSPMAG00000008689	rbfox3b	99	62.055	ENSLAFG00000016623	RBFOX3	63	61.200	Loxodonta_africana
ENSPMAG00000008689	rbfox3b	99	55.777	ENSMFAG00000002247	RBFOX3	62	59.916	Macaca_fascicularis
ENSPMAG00000008689	rbfox3b	93	76.842	ENSMMUG00000023028	RBFOX3	56	74.737	Macaca_mulatta
ENSPMAG00000008689	rbfox3b	93	76.316	ENSMNEG00000041147	RBFOX3	56	74.211	Macaca_nemestrina
ENSPMAG00000008689	rbfox3b	93	76.842	ENSMLEG00000025686	RBFOX3	56	74.737	Mandrillus_leucophaeus
ENSPMAG00000008689	rbfox3b	94	70.466	ENSMAMG00000019810	rbfox3b	56	65.803	Mastacembelus_armatus
ENSPMAG00000008689	rbfox3b	99	68.545	ENSMAMG00000020600	-	57	65.438	Mastacembelus_armatus
ENSPMAG00000008689	rbfox3b	99	77.941	ENSMZEG00005000781	rbfox3b	50	75.980	Maylandia_zebra
ENSPMAG00000008689	rbfox3b	92	45.498	ENSMZEG00005003055	-	50	75.200	Maylandia_zebra
ENSPMAG00000008689	rbfox3b	99	60.956	ENSMAUG00000013543	Rbfox3	63	60.159	Mesocricetus_auratus
ENSPMAG00000008689	rbfox3b	93	75.789	ENSMICG00000014898	RBFOX3	56	74.737	Microcebus_murinus
ENSPMAG00000008689	rbfox3b	99	60.956	ENSMOCG00000015373	Rbfox3	63	60.956	Microtus_ochrogaster
ENSPMAG00000008689	rbfox3b	93	75.789	ENSMMOG00000020193	rbfox3b	58	63.090	Mola_mola
ENSPMAG00000008689	rbfox3b	99	77.451	ENSMALG00000018270	-	50	75.490	Monopterus_albus
ENSPMAG00000008689	rbfox3b	99	77.451	MGP_CAROLIEiJ_G0017487	Rbfox3	82	72.308	Mus_caroli
ENSPMAG00000008689	rbfox3b	99	76.471	ENSMUSG00000025576	Rbfox3	82	72.308	Mus_musculus
ENSPMAG00000008689	rbfox3b	99	78.431	MGP_PahariEiJ_G0018614	Rbfox3	82	73.077	Mus_pahari
ENSPMAG00000008689	rbfox3b	99	76.961	MGP_SPRETEiJ_G0018331	Rbfox3	82	72.308	Mus_spretus
ENSPMAG00000008689	rbfox3b	99	66.250	ENSMPUG00000012319	RBFOX3	59	64.583	Mustela_putorius_furo
ENSPMAG00000008689	rbfox3b	99	62.151	ENSNGAG00000018006	Rbfox3	63	61.753	Nannospalax_galili
ENSPMAG00000008689	rbfox3b	93	77.895	ENSODEG00000009433	RBFOX3	56	75.263	Octodon_degus
ENSPMAG00000008689	rbfox3b	93	76.842	ENSONIG00000007282	-	51	74.737	Oreochromis_niloticus
ENSPMAG00000008689	rbfox3b	93	76.842	ENSONIG00000009549	rbfox3b	62	63.786	Oreochromis_niloticus
ENSPMAG00000008689	rbfox3b	93	51.695	ENSOCUG00000014217	RBFOX3	60	46.460	Oryctolagus_cuniculus
ENSPMAG00000008689	rbfox3b	99	77.941	ENSORLG00015009200	rbfox3b	50	75.132	Oryzias_latipes_hsok
ENSPMAG00000008689	rbfox3b	99	68.122	ENSOGAG00000029595	RBFOX3	57	66.376	Otolemur_garnettii
ENSPMAG00000008689	rbfox3b	99	51.938	ENSOARG00000002908	RBFOX3	62	52.569	Ovis_aries
ENSPMAG00000008689	rbfox3b	69	76.596	ENSPPAG00000025383	RBFOX3	51	57.672	Pan_paniscus
ENSPMAG00000008689	rbfox3b	93	60.606	ENSPPRG00000007819	RBFOX3	61	60.606	Panthera_pardus
ENSPMAG00000008689	rbfox3b	93	76.842	ENSPTRG00000009727	RBFOX3	56	74.737	Pan_troglodytes
ENSPMAG00000008689	rbfox3b	93	76.842	ENSPANG00000019837	RBFOX3	56	74.737	Papio_anubis
ENSPMAG00000008689	rbfox3b	99	67.647	ENSPKIG00000022633	-	53	65.196	Paramormyrops_kingsleyae
ENSPMAG00000008689	rbfox3b	99	79.412	ENSPKIG00000010299	rbfox3a	52	66.063	Paramormyrops_kingsleyae
ENSPMAG00000008689	rbfox3b	99	60.956	ENSPEMG00000010500	Rbfox3	63	60.956	Peromyscus_maniculatus_bairdii
ENSPMAG00000008689	rbfox3b	99	58.000	ENSPCIG00000005766	RBFOX3	53	71.605	Phascolarctos_cinereus
ENSPMAG00000008689	rbfox3b	99	77.941	ENSPFOG00000018294	rbfox3b	61	57.080	Poecilia_formosa
ENSPMAG00000008689	rbfox3b	99	72.059	ENSPLAG00000000481	rbfox3b	57	67.647	Poecilia_latipinna
ENSPMAG00000008689	rbfox3b	79	74.074	ENSPMEG00000022997	rbfox3b	52	71.605	Poecilia_mexicana
ENSPMAG00000008689	rbfox3b	94	76.166	ENSPREG00000012886	rbfox3b	50	74.737	Poecilia_reticulata
ENSPMAG00000008689	rbfox3b	99	58.824	ENSPPYG00000008704	RBFOX3	53	53.271	Pongo_abelii
ENSPMAG00000008689	rbfox3b	93	60.169	ENSPCAG00000001401	RBFOX3	62	60.169	Procavia_capensis
ENSPMAG00000008689	rbfox3b	95	59.751	ENSPCOG00000012689	RBFOX3	63	59.916	Propithecus_coquereli
ENSPMAG00000008689	rbfox3b	93	52.542	ENSPVAG00000015243	RBFOX3	62	51.271	Pteropus_vampyrus
ENSPMAG00000008689	rbfox3b	99	79.902	ENSPNAG00000002889	rbfox3a	50	77.941	Pygocentrus_nattereri
ENSPMAG00000008689	rbfox3b	93	77.895	ENSRNOG00000003386	Rbfox3	56	75.263	Rattus_norvegicus
ENSPMAG00000008689	rbfox3b	93	76.842	ENSRBIG00000040449	RBFOX3	54	54.852	Rhinopithecus_bieti
ENSPMAG00000008689	rbfox3b	93	76.842	ENSRROG00000000766	RBFOX3	56	74.737	Rhinopithecus_roxellana
ENSPMAG00000008689	rbfox3b	93	76.842	ENSSBOG00000031591	RBFOX3	56	74.737	Saimiri_boliviensis_boliviensis
ENSPMAG00000008689	rbfox3b	99	59.623	ENSSHAG00000016076	RBFOX3	53	71.605	Sarcophilus_harrisii
ENSPMAG00000008689	rbfox3b	99	79.902	ENSSFOG00015023260	rbfox3a	50	77.941	Scleropages_formosus
ENSPMAG00000008689	rbfox3b	93	70.000	ENSSFOG00015004716	RBFOX3	50	68.947	Scleropages_formosus
ENSPMAG00000008689	rbfox3b	93	76.316	ENSSMAG00000019052	-	56	73.684	Scophthalmus_maximus
ENSPMAG00000008689	rbfox3b	79	74.074	ENSSDUG00000023183	rbfox3b	52	71.605	Seriola_dumerili
ENSPMAG00000008689	rbfox3b	99	68.075	ENSSDUG00000015801	-	56	67.606	Seriola_dumerili
ENSPMAG00000008689	rbfox3b	93	76.842	ENSSLDG00000000149	rbfox3b	50	75.132	Seriola_lalandi_dorsalis
ENSPMAG00000008689	rbfox3b	99	69.953	ENSSLDG00000016098	-	55	68.075	Seriola_lalandi_dorsalis
ENSPMAG00000008689	rbfox3b	93	77.368	ENSSPUG00000011733	RBFOX3	55	76.316	Sphenodon_punctatus
ENSPMAG00000008689	rbfox3b	95	75.897	ENSSSCG00000039498	RBFOX3	72	61.753	Sus_scrofa
ENSPMAG00000008689	rbfox3b	99	73.171	ENSTRUG00000004894	rbfox3b	55	71.707	Takifugu_rubripes
ENSPMAG00000008689	rbfox3b	99	60.536	ENSTNIG00000011278	rbfox3b	62	59.004	Tetraodon_nigroviridis
ENSPMAG00000008689	rbfox3b	92	59.746	ENSTTRG00000003676	RBFOX3	62	59.746	Tursiops_truncatus
ENSPMAG00000008689	rbfox3b	93	76.842	ENSUAMG00000004668	RBFOX3	56	74.737	Ursus_americanus
ENSPMAG00000008689	rbfox3b	99	77.451	ENSVVUG00000017864	RBFOX3	56	74.737	Vulpes_vulpes
ENSPMAG00000008689	rbfox3b	99	52.569	ENSXETG00000020236	rbfox3	60	51.779	Xenopus_tropicalis
ENSPMAG00000008689	rbfox3b	93	74.869	ENSXCOG00000018262	rbfox3b	53	62.963	Xiphophorus_couchianus
ENSPMAG00000008689	rbfox3b	99	77.941	ENSXMAG00000012939	rbfox3b	50	75.980	Xiphophorus_maculatus