EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000009075 (Gene tree)
Gene ID: -
Gene Symbol: dicer1
Alias: -
Full Name: dicer 1%2C ribonuclease type III
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 9775 bases
Position: chrGL486392:95-9869
Accession: ZDB-GENE-030131-3445
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000010003	Ribonuclease_3	PF00636.26	2.2e-16	1	1
ENSPMAP00000010003	PAZ	PF02170.22	8.5e-40	1	1
ENSPMAP00000010003	Dicer_dimer	PF03368.14	3.2e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000010047	-	2682	-	ENSPMAP00000010003	894 (aa)	-	S4RXR2

Gene Model

Click here to download ENSPMAG00000009075's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000009075's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000009075	dicer1	80	87.097	ENSCSAVG00000006137	-	61	87.097	Ciona_savignyi
ENSPMAG00000009075	dicer1	100	65.506	ENSCSEG00000017078	dicer1	50	65.686	Cynoglossus_semilaevis
ENSPMAG00000009075	dicer1	100	65.798	ENSGALG00000010999	DICER1	51	65.798	Gallus_gallus
ENSPMAG00000009075	dicer1	73	63.690	ENSGAGG00000016379	DICER1	53	64.697	Gopherus_agassizii
ENSPMAG00000009075	dicer1	100	65.165	ENSPKIG00000019962	dicer1	51	64.939	Paramormyrops_kingsleyae
ENSPMAG00000009075	dicer1	100	65.171	ENSPNAG00000001012	dicer1	51	65.245	Pygocentrus_nattereri
ENSPMAG00000009075	dicer1	100	66.594	ENSSSCG00000028225	DICER1	55	65.625	Sus_scrofa
ENSPMAG00000009075	dicer1	100	66.776	ENSUMAG00000003027	DICER1	58	66.557	Ursus_maritimus