EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMAG00000009237 (Gene tree)
Gene ID: -
Gene Symbol: TARDBP
Alias: -
Full Name: TAR DNA binding protein
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Plus strand
Length: 6856 bases
Position: chrGL489170:150-7005
Accession: 11571
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000010160	RRM_1	PF00076.22	8.5e-28	1	2
ENSPMAP00000010160	RRM_1	PF00076.22	8.5e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000010205	TARDBP-201	654	-	ENSPMAP00000010160	218 (aa)	-	S4RY69

Gene Model

Click here to download ENSPMAG00000009237's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000009237's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMAG00000009237	TARDBP	75	37.349	ENSPMAG00000008735	HNRNPA0	80	37.349
ENSPMAG00000009237	TARDBP	85	61.081	ENSPMAG00000008859	-	55	61.081
ENSPMAG00000009237	TARDBP	83	32.474	ENSPMAG00000004449	-	82	31.915

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000009237	TARDBP	95	71.564	ENSG00000120948	TARDBP	95	78.378	Homo_sapiens
ENSPMAG00000009237	TARDBP	93	73.659	ENSAPOG00000012879	tardbpl	63	77.368	Acanthochromis_polyacanthus
ENSPMAG00000009237	TARDBP	85	59.459	ENSAMEG00000008772	-	70	59.459	Ailuropoda_melanoleuca
ENSPMAG00000009237	TARDBP	98	72.558	ENSACIG00000003327	tardbpl	54	72.093	Amphilophus_citrinellus
ENSPMAG00000009237	TARDBP	93	73.171	ENSAOCG00000020211	tardbpl	62	78.919	Amphiprion_ocellaris
ENSPMAG00000009237	TARDBP	98	72.093	ENSAPEG00000018093	tardbpl	62	78.919	Amphiprion_percula
ENSPMAG00000009237	TARDBP	93	73.171	ENSATEG00000017658	tardbpl	62	79.459	Anabas_testudineus
ENSPMAG00000009237	TARDBP	95	72.986	ENSANAG00000035249	-	69	78.421	Aotus_nancymaae
ENSPMAG00000009237	TARDBP	93	63.768	ENSANAG00000027281	-	77	68.519	Aotus_nancymaae
ENSPMAG00000009237	TARDBP	93	73.659	ENSACLG00000025494	tardbpl	62	79.459	Astatotilapia_calliptera
ENSPMAG00000009237	TARDBP	93	74.038	ENSAMXG00000030795	tardbpl	63	79.894	Astyanax_mexicanus
ENSPMAG00000009237	TARDBP	91	75.000	ENSAMXG00000039549	tardbp	50	75.000	Astyanax_mexicanus
ENSPMAG00000009237	TARDBP	95	72.986	ENSBTAG00000003697	TARDBP	63	78.421	Bos_taurus
ENSPMAG00000009237	TARDBP	91	75.369	ENSCJAG00000002381	TARDBP	69	78.421	Callithrix_jacchus
ENSPMAG00000009237	TARDBP	87	69.312	ENSCAFG00020013548	-	66	70.115	Canis_lupus_dingo
ENSPMAG00000009237	TARDBP	92	75.500	ENSCAFG00020002258	-	63	77.895	Canis_lupus_dingo
ENSPMAG00000009237	TARDBP	95	72.986	ENSCHIG00000026090	TARDBP	63	78.421	Capra_hircus
ENSPMAG00000009237	TARDBP	97	71.698	ENSTSYG00000004077	TARDBP	63	77.895	Carlito_syrichta
ENSPMAG00000009237	TARDBP	91	74.384	ENSCAPG00000015189	TARDBP	63	77.368	Cavia_aperea
ENSPMAG00000009237	TARDBP	95	72.038	ENSCPOG00000011619	TARDBP	63	77.368	Cavia_porcellus
ENSPMAG00000009237	TARDBP	91	75.369	ENSCCAG00000025859	-	63	78.421	Cebus_capucinus
ENSPMAG00000009237	TARDBP	100	63.158	ENSCCAG00000010279	-	66	71.892	Cebus_capucinus
ENSPMAG00000009237	TARDBP	87	63.684	ENSCCAG00000034419	-	74	63.684	Cebus_capucinus
ENSPMAG00000009237	TARDBP	91	68.473	ENSCATG00000031367	TARDBP	62	71.053	Cercocebus_atys
ENSPMAG00000009237	TARDBP	87	56.842	ENSCATG00000029126	-	65	56.316	Cercocebus_atys
ENSPMAG00000009237	TARDBP	87	77.368	ENSCLAG00000014547	TARDBP	62	77.368	Chinchilla_lanigera
ENSPMAG00000009237	TARDBP	73	58.750	ENSCHOG00000013276	-	58	58.750	Choloepus_hoffmanni
ENSPMAG00000009237	TARDBP	87	76.842	ENSCANG00000030022	TARDBP	66	76.842	Colobus_angolensis_palliatus
ENSPMAG00000009237	TARDBP	91	73.399	ENSCGRG00001010684	-	63	76.316	Cricetulus_griseus_chok1gshd
ENSPMAG00000009237	TARDBP	95	71.090	ENSCGRG00000007923	-	63	76.316	Cricetulus_griseus_crigri
ENSPMAG00000009237	TARDBP	98	68.692	ENSCSEG00000005274	tardbpl	62	74.468	Cynoglossus_semilaevis
ENSPMAG00000009237	TARDBP	95	71.963	ENSCVAG00000016647	tardbpl	62	79.459	Cyprinodon_variegatus
ENSPMAG00000009237	TARDBP	93	72.195	ENSDARG00000004452	tardbpl	62	78.378	Danio_rerio
ENSPMAG00000009237	TARDBP	95	72.038	ENSDNOG00000008531	TARDBP	63	77.368	Dasypus_novemcinctus
ENSPMAG00000009237	TARDBP	84	54.497	FBgn0036496	CG7804	58	54.497	Drosophila_melanogaster
ENSPMAG00000009237	TARDBP	97	54.113	FBgn0025790	TBPH	55	62.032	Drosophila_melanogaster
ENSPMAG00000009237	TARDBP	87	77.778	ENSETEG00000004358	TARDBP	56	77.778	Echinops_telfairi
ENSPMAG00000009237	TARDBP	98	54.260	ENSEBUG00000007562	-	56	61.146	Eptatretus_burgeri
ENSPMAG00000009237	TARDBP	86	57.447	ENSEBUG00000000353	-	52	58.470	Eptatretus_burgeri
ENSPMAG00000009237	TARDBP	91	74.877	ENSEASG00005019017	TARDBP	63	78.750	Equus_asinus_asinus
ENSPMAG00000009237	TARDBP	95	72.512	ENSECAG00000008338	TARDBP	63	77.895	Equus_caballus
ENSPMAG00000009237	TARDBP	87	75.789	ENSELUG00000013252	tardbpl	62	77.297	Esox_lucius
ENSPMAG00000009237	TARDBP	82	66.292	ENSFCAG00000040067	-	78	66.292	Felis_catus
ENSPMAG00000009237	TARDBP	95	71.564	ENSFCAG00000000050	TARDBP	63	76.842	Felis_catus
ENSPMAG00000009237	TARDBP	95	72.512	ENSFDAG00000004675	TARDBP	63	77.895	Fukomys_damarensis
ENSPMAG00000009237	TARDBP	93	73.659	ENSFHEG00000010145	tardbpl	62	79.459	Fundulus_heteroclitus
ENSPMAG00000009237	TARDBP	92	72.772	ENSGMOG00000000526	tardbpl	62	77.297	Gadus_morhua
ENSPMAG00000009237	TARDBP	98	72.093	ENSGAFG00000019234	tardbpl	54	72.093	Gambusia_affinis
ENSPMAG00000009237	TARDBP	93	72.683	ENSGACG00000007124	tardbpl	62	78.378	Gasterosteus_aculeatus
ENSPMAG00000009237	TARDBP	89	46.907	ENSGGOG00000042352	-	56	51.366	Gorilla_gorilla
ENSPMAG00000009237	TARDBP	93	73.659	ENSHBUG00000020551	tardbpl	62	79.459	Haplochromis_burtoni
ENSPMAG00000009237	TARDBP	87	77.895	ENSHGLG00000018967	TARDBP	62	77.895	Heterocephalus_glaber_female
ENSPMAG00000009237	TARDBP	87	77.895	ENSHGLG00100014781	TARDBP	62	77.895	Heterocephalus_glaber_male
ENSPMAG00000009237	TARDBP	91	71.782	ENSHCOG00000015858	tardbpl	63	75.676	Hippocampus_comes
ENSPMAG00000009237	TARDBP	96	70.335	ENSHCOG00000002224	tardbp	57	75.936	Hippocampus_comes
ENSPMAG00000009237	TARDBP	85	79.365	ENSIPUG00000004992	tardbp	62	79.365	Ictalurus_punctatus
ENSPMAG00000009237	TARDBP	95	72.038	ENSSTOG00000008406	-	63	77.368	Ictidomys_tridecemlineatus
ENSPMAG00000009237	TARDBP	87	77.895	ENSJJAG00000014196	-	64	77.895	Jaculus_jaculus
ENSPMAG00000009237	TARDBP	98	72.558	ENSKMAG00000015796	tardbpl	62	79.459	Kryptolebias_marmoratus
ENSPMAG00000009237	TARDBP	93	72.195	ENSLBEG00000021801	tardbpl	62	77.838	Labrus_bergylta
ENSPMAG00000009237	TARDBP	96	71.698	ENSLBEG00000022827	tardbp	62	78.075	Labrus_bergylta
ENSPMAG00000009237	TARDBP	55	67.227	ENSMFAG00000000832	-	62	67.227	Macaca_fascicularis
ENSPMAG00000009237	TARDBP	95	71.564	ENSMFAG00000002750	TARDBP	66	76.842	Macaca_fascicularis
ENSPMAG00000009237	TARDBP	95	56.250	ENSMMUG00000003940	-	69	66.250	Macaca_mulatta
ENSPMAG00000009237	TARDBP	95	71.564	ENSMMUG00000007456	TARDBP	63	76.842	Macaca_mulatta
ENSPMAG00000009237	TARDBP	91	73.892	ENSMNEG00000030163	TARDBP	66	76.842	Macaca_nemestrina
ENSPMAG00000009237	TARDBP	100	56.364	ENSMNEG00000025649	-	61	63.006	Macaca_nemestrina
ENSPMAG00000009237	TARDBP	87	76.316	ENSMLEG00000041791	TARDBP	66	76.316	Mandrillus_leucophaeus
ENSPMAG00000009237	TARDBP	98	71.628	ENSMAMG00000009233	tardbpl	62	78.378	Mastacembelus_armatus
ENSPMAG00000009237	TARDBP	98	72.558	ENSMZEG00005013608	tardbpl	62	79.459	Maylandia_zebra
ENSPMAG00000009237	TARDBP	95	70.616	ENSMAUG00000018057	Tardbp	63	75.789	Mesocricetus_auratus
ENSPMAG00000009237	TARDBP	91	71.921	ENSMICG00000003838	TARDBP	61	74.737	Microcebus_murinus
ENSPMAG00000009237	TARDBP	95	71.090	ENSMOCG00000003562	Tardbp	63	76.316	Microtus_ochrogaster
ENSPMAG00000009237	TARDBP	98	71.628	ENSMMOG00000009189	tardbpl	54	71.628	Mola_mola
ENSPMAG00000009237	TARDBP	95	72.512	ENSMODG00000011233	-	63	77.895	Monodelphis_domestica
ENSPMAG00000009237	TARDBP	98	71.362	ENSMALG00000021161	tardbpl	62	78.919	Monopterus_albus
ENSPMAG00000009237	TARDBP	92	74.000	MGP_CAROLIEiJ_G0026805	Tardbp	95	75.543	Mus_caroli
ENSPMAG00000009237	TARDBP	95	71.090	ENSMUSG00000041459	Tardbp	95	75.676	Mus_musculus
ENSPMAG00000009237	TARDBP	92	74.500	MGP_PahariEiJ_G0029153	Tardbp	95	76.087	Mus_pahari
ENSPMAG00000009237	TARDBP	92	74.000	MGP_SPRETEiJ_G0027798	Tardbp	95	75.543	Mus_spretus
ENSPMAG00000009237	TARDBP	95	72.512	ENSMPUG00000016443	TARDBP	63	77.895	Mustela_putorius_furo
ENSPMAG00000009237	TARDBP	87	77.895	ENSNGAG00000023416	-	64	77.895	Nannospalax_galili
ENSPMAG00000009237	TARDBP	98	72.558	ENSNBRG00000006706	tardbpl	62	79.459	Neolamprologus_brichardi
ENSPMAG00000009237	TARDBP	91	73.892	ENSNLEG00000009512	TARDBP	63	76.842	Nomascus_leucogenys
ENSPMAG00000009237	TARDBP	100	64.706	ENSNLEG00000026620	-	66	75.676	Nomascus_leucogenys
ENSPMAG00000009237	TARDBP	87	77.895	ENSMEUG00000006548	TARDBP	50	77.895	Notamacropus_eugenii
ENSPMAG00000009237	TARDBP	98	72.558	ENSONIG00000002332	tardbpl	62	79.459	Oreochromis_niloticus
ENSPMAG00000009237	TARDBP	82	78.652	ENSOCUG00000004049	-	84	78.652	Oryctolagus_cuniculus
ENSPMAG00000009237	TARDBP	95	71.770	ENSORLG00000005188	tardbpl	62	78.378	Oryzias_latipes
ENSPMAG00000009237	TARDBP	95	71.770	ENSORLG00020013159	tardbpl	62	78.378	Oryzias_latipes_hni
ENSPMAG00000009237	TARDBP	95	71.770	ENSORLG00015005048	tardbpl	62	78.378	Oryzias_latipes_hsok
ENSPMAG00000009237	TARDBP	95	72.249	ENSOMEG00000003102	tardbpl	62	78.919	Oryzias_melastigma
ENSPMAG00000009237	TARDBP	87	78.421	ENSOARG00000010657	-	56	78.421	Ovis_aries
ENSPMAG00000009237	TARDBP	73	61.350	ENSOARG00000020974	-	70	64.474	Ovis_aries
ENSPMAG00000009237	TARDBP	91	73.892	ENSPPAG00000039086	TARDBP	66	76.842	Pan_paniscus
ENSPMAG00000009237	TARDBP	91	73.892	ENSPPRG00000003255	TARDBP	63	76.842	Panthera_pardus
ENSPMAG00000009237	TARDBP	91	73.892	ENSPTIG00000011396	TARDBP	64	76.842	Panthera_tigris_altaica
ENSPMAG00000009237	TARDBP	87	65.608	ENSPTIG00000014945	-	64	68.156	Panthera_tigris_altaica
ENSPMAG00000009237	TARDBP	95	71.564	ENSPTRG00000048576	-	66	76.842	Pan_troglodytes
ENSPMAG00000009237	TARDBP	91	73.892	ENSPTRG00000000136	TARDBP	66	76.842	Pan_troglodytes
ENSPMAG00000009237	TARDBP	91	73.892	ENSPANG00000017459	TARDBP	66	76.842	Papio_anubis
ENSPMAG00000009237	TARDBP	93	74.146	ENSPKIG00000013415	tardbpl	62	80.541	Paramormyrops_kingsleyae
ENSPMAG00000009237	TARDBP	93	73.171	ENSPKIG00000012179	tardbp	58	79.459	Paramormyrops_kingsleyae
ENSPMAG00000009237	TARDBP	87	75.789	ENSPEMG00000015154	Tardbp	64	75.789	Peromyscus_maniculatus_bairdii
ENSPMAG00000009237	TARDBP	91	74.877	ENSPCIG00000007956	TARDBP	66	77.914	Phascolarctos_cinereus
ENSPMAG00000009237	TARDBP	93	73.171	ENSPFOG00000004365	tardbpl	62	78.919	Poecilia_formosa
ENSPMAG00000009237	TARDBP	93	73.171	ENSPLAG00000014550	-	62	78.919	Poecilia_latipinna
ENSPMAG00000009237	TARDBP	93	73.171	ENSPLAG00000007292	tardbpl	62	78.919	Poecilia_latipinna
ENSPMAG00000009237	TARDBP	93	73.171	ENSPMEG00000016541	tardbpl	62	78.919	Poecilia_mexicana
ENSPMAG00000009237	TARDBP	98	71.963	ENSPREG00000004376	tardbp	50	78.075	Poecilia_reticulata
ENSPMAG00000009237	TARDBP	97	72.685	ENSPREG00000016071	tardbpl	62	78.919	Poecilia_reticulata
ENSPMAG00000009237	TARDBP	95	46.411	ENSPPYG00000013322	-	60	48.241	Pongo_abelii
ENSPMAG00000009237	TARDBP	92	54.455	ENSPPYG00000010696	-	61	56.614	Pongo_abelii
ENSPMAG00000009237	TARDBP	85	52.973	ENSPPYG00000016872	-	61	52.973	Pongo_abelii
ENSPMAG00000009237	TARDBP	100	53.211	ENSPCOG00000016073	TARDBP	56	56.842	Propithecus_coquereli
ENSPMAG00000009237	TARDBP	93	73.659	ENSPNYG00000007072	tardbpl	62	79.459	Pundamilia_nyererei
ENSPMAG00000009237	TARDBP	93	73.684	ENSPNAG00000022439	tardbpl	62	79.894	Pygocentrus_nattereri
ENSPMAG00000009237	TARDBP	92	74.500	ENSRNOG00000012455	Tardbp	66	76.842	Rattus_norvegicus
ENSPMAG00000009237	TARDBP	91	73.892	ENSRBIG00000034783	TARDBP	68	76.842	Rhinopithecus_bieti
ENSPMAG00000009237	TARDBP	95	71.564	ENSRROG00000039927	TARDBP	68	76.842	Rhinopithecus_roxellana
ENSPMAG00000009237	TARDBP	91	75.369	ENSSBOG00000028814	-	66	78.421	Saimiri_boliviensis_boliviensis
ENSPMAG00000009237	TARDBP	91	62.814	ENSSBOG00000022837	-	58	69.536	Saimiri_boliviensis_boliviensis
ENSPMAG00000009237	TARDBP	87	77.895	ENSSHAG00000014033	TARDBP	62	77.895	Sarcophilus_harrisii
ENSPMAG00000009237	TARDBP	87	76.842	ENSSFOG00015014029	tardbpl	74	76.842	Scleropages_formosus
ENSPMAG00000009237	TARDBP	87	77.895	ENSSFOG00015008512	tardbp	60	77.895	Scleropages_formosus
ENSPMAG00000009237	TARDBP	93	74.146	ENSSMAG00000017715	tardbpl	62	80.000	Scophthalmus_maximus
ENSPMAG00000009237	TARDBP	93	74.146	ENSSDUG00000006852	tardbpl	62	80.000	Seriola_dumerili
ENSPMAG00000009237	TARDBP	93	74.146	ENSSLDG00000000280	tardbpl	62	80.000	Seriola_lalandi_dorsalis
ENSPMAG00000009237	TARDBP	91	76.355	ENSSPUG00000006688	TARDBP	62	78.947	Sphenodon_punctatus
ENSPMAG00000009237	TARDBP	92	73.892	ENSSPAG00000005946	tardbp	63	76.875	Stegastes_partitus
ENSPMAG00000009237	TARDBP	93	73.171	ENSSPAG00000009970	tardbpl	62	78.919	Stegastes_partitus
ENSPMAG00000009237	TARDBP	93	60.976	ENSSSCG00000024051	-	50	63.587	Sus_scrofa
ENSPMAG00000009237	TARDBP	95	72.038	ENSSSCG00000023126	-	63	77.368	Sus_scrofa
ENSPMAG00000009237	TARDBP	98	70.698	ENSTRUG00000012070	tardbpl	63	71.958	Takifugu_rubripes
ENSPMAG00000009237	TARDBP	95	70.952	ENSTRUG00000012063	tardbp	59	74.866	Takifugu_rubripes
ENSPMAG00000009237	TARDBP	89	73.469	ENSUMAG00000023737	-	67	73.469	Ursus_maritimus
ENSPMAG00000009237	TARDBP	95	72.512	ENSVVUG00000027110	TARDBP	63	77.895	Vulpes_vulpes
ENSPMAG00000009237	TARDBP	93	73.171	ENSXMAG00000011345	tardbpl	62	78.919	Xiphophorus_maculatus